RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 ZNF479Q96JC4 524 aa11.52□□□□□ -0.57
U2AF1-210ENST00000478282 TRAV40A0A0B4J280 105 aa11.52□□□□□ -0.57
U2AF1-210ENST00000478282 K7EMI3 77 aa11.52□□□□□ -0.57
U2AF1-210ENST00000478282 DTX2Q86UW9 622 aa11.52□□□□□ -0.57
U2AF1-210ENST00000478282 MRPL35Q9NZE8 188 aaKnown RBP11.52□□□□□ -0.57
U2AF1-210ENST00000478282 J3QR89 54 aa11.51□□□□□ -0.57
U2AF1-210ENST00000478282 MAPKAPK5-AS1Q8N8E1 139 aa11.51□□□□□ -0.57
U2AF1-210ENST00000478282 GAGE12HA6NDE8 117 aa11.51□□□□□ -0.57
U2AF1-210ENST00000478282 SMAGPQ0VAQ4 97 aa11.51□□□□□ -0.57
U2AF1-210ENST00000478282 CFHR4Q92496 578 aa11.51□□□□□ -0.57
U2AF1-210ENST00000478282 LYNX1G3V0Z9 82 aa11.5□□□□□ -0.57
U2AF1-210ENST00000478282 LYNX1P0DP58 116 aa11.5□□□□□ -0.57
U2AF1-210ENST00000478282 AGRNO00468 2067 aa11.5□□□□□ -0.57
U2AF1-210ENST00000478282 IGHV3-23P01764 117 aa11.5□□□□□ -0.57
U2AF1-210ENST00000478282 PPIFP30405 207 aaKnown RBP11.5□□□□□ -0.57
U2AF1-210ENST00000478282 C12orf74Q32Q52 190 aa11.5□□□□□ -0.57
U2AF1-210ENST00000478282 DYNAPQ8N1N2 210 aa11.5□□□□□ -0.57
U2AF1-210ENST00000478282 ZNF843Q8N446 348 aa11.5□□□□□ -0.57
U2AF1-210ENST00000478282 ONECUT1Q9UBC0 465 aa11.5□□□□□ -0.57
U2AF1-210ENST00000478282 POLEQ07864 2286 aa11.5□□□□□ -0.57
U2AF1-210ENST00000478282 ERCC8Q13216 396 aa11.5□□□□□ -0.57
U2AF1-210ENST00000478282 C5orf64Q2M2E5 130 aa11.5□□□□□ -0.57
U2AF1-210ENST00000478282 MYOZ3Q8TDC0 251 aa11.49□□□□□ -0.57
U2AF1-210ENST00000478282 ZNF207O43670 478 aaKnown RBP11.49□□□□□ -0.57
U2AF1-210ENST00000478282 IGFBPL1Q8WX77 278 aa11.49□□□□□ -0.57
U2AF1-210ENST00000478282 DPM3Q9P2X0 92 aa11.49□□□□□ -0.57
U2AF1-210ENST00000478282 PCNX1Q96RV3 2341 aa11.49□□□□□ -0.57
U2AF1-210ENST00000478282 H3BMG7 143 aa11.48□□□□□ -0.57
U2AF1-210ENST00000478282 CCL21O00585 134 aa11.48□□□□□ -0.57
U2AF1-210ENST00000478282 TTC9CQ8N5M4 171 aa11.48□□□□□ -0.57
U2AF1-210ENST00000478282 SPATA25Q9BR10 227 aa11.48□□□□□ -0.57
U2AF1-210ENST00000478282 LAGE3Q14657 143 aa11.48□□□□□ -0.57
U2AF1-210ENST00000478282 ARPC1AQ92747 370 aa11.48□□□□□ -0.57
U2AF1-210ENST00000478282 A0A087WX48 190 aa11.48□□□□□ -0.57
U2AF1-210ENST00000478282 TRGV3P03979 118 aa11.48□□□□□ -0.57
U2AF1-210ENST00000478282 TPRP12270 2363 aaKnown RBP11.47□□□□□ -0.57
U2AF1-210ENST00000478282 PRAC2D3DTV9 90 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 CTSGP08311 255 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 NDPQ00604 133 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 HES1Q14469 280 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 ZNF672Q499Z4 452 aaPredicted RBP11.47□□□□□ -0.57
U2AF1-210ENST00000478282 SH2D6Q7Z4S9 175 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 NRACQ8N912 160 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 COL6A6A6NMZ7 2263 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 RELNP78509 3460 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 SCGB2A1O75556 95 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 ETDBQ3ZM63 59 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 IL17RELQ6ZVW7 336 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 HIST1H4GQ99525 98 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 SPAG8Q99932 426 aaPredicted RBP11.47□□□□□ -0.57
U2AF1-210ENST00000478282 IGKV3D-20A0A0C4DH25 116 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 B9A039 149 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 PLNP26678 52 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 RRN3P1Q2M238 152 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 ZNF502Q8TBZ5 544 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 SH3BGRL2Q9UJC5 107 aa11.47□□□□□ -0.57
U2AF1-210ENST00000478282 OR11H6Q8NGC7 330 aa11.46□□□□□ -0.57
U2AF1-210ENST00000478282 TRBV7-3A0A075B6L6 115 aa11.46□□□□□ -0.58
U2AF1-210ENST00000478282 NCBP2LA6PVI3 153 aaKnown RBP11.46□□□□□ -0.58
U2AF1-210ENST00000478282 GNLYP22749 145 aa11.46□□□□□ -0.58
U2AF1-210ENST00000478282 GAGE13Q4V321 117 aa11.46□□□□□ -0.58
U2AF1-210ENST00000478282 AMTNQ6UX39 209 aa11.46□□□□□ -0.58
U2AF1-210ENST00000478282 RBAKDNA6NC62 111 aa11.45□□□□□ -0.58
U2AF1-210ENST00000478282 CDSNQ15517 529 aa11.45□□□□□ -0.58
U2AF1-210ENST00000478282 LY6G5BQ8NDX9 201 aa11.45□□□□□ -0.58
U2AF1-210ENST00000478282 PRO0461Q9UI25 63 aa11.45□□□□□ -0.58
U2AF1-210ENST00000478282 IGHV3OR16-8A0A075B7F1 116 aa11.45□□□□□ -0.58
U2AF1-210ENST00000478282 NDUFS8O00217 210 aa11.45□□□□□ -0.58
U2AF1-210ENST00000478282 C11orf21Q9P2W6 132 aa11.45□□□□□ -0.58
U2AF1-210ENST00000478282 A0A1B0GWB2 263 aa11.45□□□□□ -0.58
U2AF1-210ENST00000478282 LINC01619G3V211 115 aa11.45□□□□□ -0.58
U2AF1-210ENST00000478282 TRAV26-2A0A0B4J265 109 aa11.44□□□□□ -0.58
U2AF1-210ENST00000478282 A0A1B0GV72 72 aa11.44□□□□□ -0.58
U2AF1-210ENST00000478282 CCDC144NLQ6NUI1 221 aa11.44□□□□□ -0.58
U2AF1-210ENST00000478282 RNF182Q8N6D2 247 aa11.44□□□□□ -0.58
U2AF1-210ENST00000478282 EFNA4P52798 201 aa11.43□□□□□ -0.58
U2AF1-210ENST00000478282 KLRD1Q13241 179 aa11.43□□□□□ -0.58
U2AF1-210ENST00000478282 ATP6V0BQ99437 205 aa11.43□□□□□ -0.58
U2AF1-210ENST00000478282 UFC1Q9Y3C8 167 aa11.43□□□□□ -0.58
U2AF1-210ENST00000478282 IGHV3-35A0A0C4DH35 117 aa11.43□□□□□ -0.58
U2AF1-210ENST00000478282 IGHV7-4-1A0A0J9YVY3 117 aa11.43□□□□□ -0.58
U2AF1-210ENST00000478282 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.43□□□□□ -0.58
U2AF1-210ENST00000478282 PRB1P04280 392 aa11.43□□□□□ -0.58
U2AF1-210ENST00000478282 F8VRH5 84 aa11.43□□□□□ -0.58
U2AF1-210ENST00000478282 MTURNQ8N3F0 131 aa11.43□□□□□ -0.58
U2AF1-210ENST00000478282 ITLN2Q8WWU7 325 aaPredicted RBP11.43□□□□□ -0.58
U2AF1-210ENST00000478282 TRAV12-1A0A0B4J245 112 aa11.42□□□□□ -0.58
U2AF1-210ENST00000478282 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa11.42□□□□□ -0.58
U2AF1-210ENST00000478282 EPG5Q9HCE0 2579 aa11.42□□□□□ -0.58
U2AF1-210ENST00000478282 ARHGAP32A7KAX9 2087 aa11.42□□□□□ -0.58
U2AF1-210ENST00000478282 ODF3BA8MYP8 253 aa11.42□□□□□ -0.58
U2AF1-210ENST00000478282 H7C1H1 209 aa11.42□□□□□ -0.58
U2AF1-210ENST00000478282 SLC50A1Q9BRV3 221 aa11.42□□□□□ -0.58
U2AF1-210ENST00000478282 AGPAT4-IT1Q9H0P7 198 aa11.42□□□□□ -0.58
U2AF1-210ENST00000478282 UBR5O95071 2799 aaPredicted RBP11.42□□□□□ -0.58
U2AF1-210ENST00000478282 ADGRG4Q8IZF6 3080 aa11.42□□□□□ -0.58
U2AF1-210ENST00000478282 MYMXA0A1B0GTQ4 84 aa11.42□□□□□ -0.58
U2AF1-210ENST00000478282 OR11H12B2RN74 326 aa11.41□□□□□ -0.58
U2AF1-210ENST00000478282 CD3EP07766 207 aa11.41□□□□□ -0.58
U2AF1-210ENST00000478282 OR11H1Q8NG94 326 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms