RNA–Protein interactions for RNA: ENST00000477572.1

VPS50-213, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 504 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-213ENST00000477572 TRAV13-1A0A0B4J241 112 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 A0A0D9SG52 128 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 A0A0G2JQZ4 141 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 IRGMA1A4Y4 181 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 GRIFINA4D1Z8 144 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 A8MWV9 139 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 H3BMG7 143 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 UBE2L6O14933 153 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 RER1O15258 196 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 C1QAP02745 245 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 ZNF705DP0CH99 300 aaPredicted RBP0.99□□□□□ -2.25
VPS50-213ENST00000477572 PYYP10082 97 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 FABP4P15090 132 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 SNRPD3P62318 126 aaKnown RBP0.99□□□□□ -2.25
VPS50-213ENST00000477572 QRFPP83859 136 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 ZNF117Q03924 483 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 ZNF90Q03938 601 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 AKR1C1Q04828 323 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 IQCJQ1A5X6 159 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 AADACL3Q5VUY0 350 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 AMTNQ6UX39 209 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 LINC00299Q6ZSB3 139 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 SVBPQ8N300 66 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 OR4B1Q8NGF8 309 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 OR10AC1Q8NH08 325 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 OR5AK2Q8NH90 309 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 OTOSQ8NHW6 89 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 S100ZQ8WXG8 99 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 MS4A6EQ96DS6 147 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 LINC00526Q96FQ7 95 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 C2orf50Q96LR7 162 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 DPY30Q9C005 99 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 BET1LQ9NYM9 111 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 CCDC167Q9P0B6 97 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 PSORS1C2Q9UIG4 136 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 AK3Q9UIJ7 227 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 LSM2Q9Y333 95 aaKnown RBP0.99□□□□□ -2.25
VPS50-213ENST00000477572 KLK5Q9Y337 293 aaPredicted RBP0.99□□□□□ -2.25
VPS50-213ENST00000477572 CHCHD2Q9Y6H1 151 aaPredicted RBP0.99□□□□□ -2.25
VPS50-213ENST00000477572 PIK3C2AO00443 1686 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 KIAA1549Q9HCM3 1950 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 ADGRB1O14514 1584 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 EPRSP07814 1512 aaKnown RBP0.99□□□□□ -2.25
VPS50-213ENST00000477572 TRPM7Q96QT4 1865 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 PXDNLA1KZ92 1463 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 PRXQ9BXM0 1461 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 NLRP1Q9C000 1473 aa0.99□□□□□ -2.25
VPS50-213ENST00000477572 HFM1A2PYH4 1435 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 KDM6AO15550 1401 aaPredicted RBP0.98□□□□□ -2.25
VPS50-213ENST00000477572 SCN11AQ9UI33 1791 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 MED12LQ86YW9 2145 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 NWD2Q9ULI1 1742 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 TARBP1Q13395 1621 aaKnown RBP0.98□□□□□ -2.25
VPS50-213ENST00000477572 PREX2Q70Z35 1606 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 ABCA9Q8IUA7 1624 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 GREB1Q4ZG55 1949 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 TRAV12-2A0A075B6T6 113 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 TRAV1-1A0A0B4J248 108 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 TRBV27A0A0K0K1C4 114 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 C3orf85A0A1B0GTC6 90 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 LOC107986453A0A1B0GWG9 222 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 TCRBV3S1A0A5B6 114 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 C9JCJ5 164 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 TMEM262E9PQX1 116 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 K7EP34 96 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 UQCRQO14949 82 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 OR1I1O60431 355 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 CST7O76096 145 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 UBL3O95164 117 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 CD3DP04234 171 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 SRP19P09132 144 aaKnown RBP0.98□□□□□ -2.25
VPS50-213ENST00000477572 TRGC1P0CF51 173 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 TPT1P13693 172 aaKnown RBP0.98□□□□□ -2.25
VPS50-213ENST00000477572 HLA-DRB4P13762 266 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HIST1H2BOP23527 126 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HIST1H2BBP33778 126 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 RNASE4P34096 147 aaKnown RBP0.98□□□□□ -2.25
VPS50-213ENST00000477572 SRP14P37108 136 aaKnown RBP0.98□□□□□ -2.25
VPS50-213ENST00000477572 DYNLT3P51808 116 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HIST1H2BDP58876 126 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HIST1H2BCP62807 126 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 RPL30P62888 115 aaKnown RBP0.98□□□□□ -2.25
VPS50-213ENST00000477572 UBE2BP63146 152 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HBBP68871 147 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 Q0VG73 95 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 KISS1Q15726 138 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HIST2H2BEQ16778 126 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 LGALS9BQ3B8N2 356 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 LINC01554Q52M75 96 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 Q56UQ5 140 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 SPRNQ5BIV9 151 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 HIST2H2BFQ5QNW6 126 aaPredicted RBP0.98□□□□□ -2.25
VPS50-213ENST00000477572 LGALS9CQ6DKI2 356 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 EIF5AL1Q6IS14 154 aaKnown RBP0.98□□□□□ -2.25
VPS50-213ENST00000477572 TMEM91Q6ZNR0 172 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 ARPINQ7Z6K5 226 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 TEN1Q86WV5 123 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 BPIFA4PQ86YQ2 179 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 DAND5Q8N907 189 aa0.98□□□□□ -2.25
VPS50-213ENST00000477572 MORN4Q8NDC4 146 aa0.98□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms