RNA–Protein interactions for RNA: ENST00000477264.1

CLSTN1-205, Transcript of calsyntenin 1, humanhuman

TSL 2

Gene CLSTN1, Length 2,169 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-205ENST00000477264 TMEM160Q9NX00 188 aa11.89□□□□□ -0.51
CLSTN1-205ENST00000477264 IGLV2-18A0A075B6J9 118 aa11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 TRAV12-1A0A0B4J245 112 aa11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 IL4P05112 153 aa11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 SPINK8P0C7L1 97 aa11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 TMEM155Q4W5P6 130 aa11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 AMTNQ6UX39 209 aa11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 SYT8Q8NBV8 401 aa11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 RNF5Q99942 180 aa11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 MRPL35Q9NZE8 188 aaKnown RBP11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 TRAV40A0A0B4J280 105 aa11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 K7EIM0 57 aa11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 MAPKAPK5-AS1Q8N8E1 139 aa11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 C20orf78Q9BR46 151 aa11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 KALRNO60229 2985 aa11.88□□□□□ -0.51
CLSTN1-205ENST00000477264 PLXNB1O43157 2135 aa11.87□□□□□ -0.51
CLSTN1-205ENST00000477264 IGHV1-8P0DP01 117 aa11.87□□□□□ -0.51
CLSTN1-205ENST00000477264 INSL3P51460 131 aa11.87□□□□□ -0.51
CLSTN1-205ENST00000477264 ARFGEF3Q5TH69 2177 aa11.87□□□□□ -0.51
CLSTN1-205ENST00000477264 AGRNO00468 2067 aa11.87□□□□□ -0.51
CLSTN1-205ENST00000477264 MYMXA0A1B0GTQ4 84 aa11.86□□□□□ -0.51
CLSTN1-205ENST00000477264 HOXA3O43365 443 aaPredicted RBP11.86□□□□□ -0.51
CLSTN1-205ENST00000477264 APELAP0DMC3 54 aa11.86□□□□□ -0.51
CLSTN1-205ENST00000477264 RPL7P18124 248 aaKnown RBP11.86□□□□□ -0.51
CLSTN1-205ENST00000477264 GNLYP22749 145 aa11.86□□□□□ -0.51
CLSTN1-205ENST00000477264 LAGE3Q14657 143 aa11.86□□□□□ -0.51
CLSTN1-205ENST00000477264 LINC01560Q8TB33 94 aa11.86□□□□□ -0.51
CLSTN1-205ENST00000477264 PPDPFLQ8WWR9 84 aa11.86□□□□□ -0.51
CLSTN1-205ENST00000477264 RELNP78509 3460 aa11.86□□□□□ -0.51
CLSTN1-205ENST00000477264 MORN3Q6PF18 240 aaPredicted RBP11.86□□□□□ -0.51
CLSTN1-205ENST00000477264 Q6ZUT4 128 aa11.86□□□□□ -0.51
CLSTN1-205ENST00000477264 ERG28Q9UKR5 140 aa11.86□□□□□ -0.51
CLSTN1-205ENST00000477264 IGKV2-40A0A087WW87 121 aaPredicted RBP11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 IGHV3-72A0A0B4J1Y9 119 aa11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 IGKV2D-40P01614 121 aaPredicted RBP11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 GRNP28799 593 aaKnown RBP11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 OR11H6Q8NGC7 330 aa11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 CACNA1BQ00975 2339 aa11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 FABP5P3A8MUU1 101 aa11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 F8VRH5 84 aa11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 H7C1H1 209 aa11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 FCN3O75636 299 aa11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 CD3EP07766 207 aa11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 CNTFRP26992 372 aa11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 LOXP28300 417 aaPredicted RBP11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 CDSNQ15517 529 aa11.85□□□□□ -0.51
CLSTN1-205ENST00000477264 USP24Q9UPU5 2620 aa11.84□□□□□ -0.51
CLSTN1-205ENST00000477264 TMEM178BH3BS89 294 aa11.84□□□□□ -0.51
CLSTN1-205ENST00000477264 IL17RELQ6ZVW7 336 aa11.84□□□□□ -0.51
CLSTN1-205ENST00000477264 ADGRG4Q8IZF6 3080 aa11.84□□□□□ -0.51
CLSTN1-205ENST00000477264 PLCE1Q9P212 2302 aa11.84□□□□□ -0.51
CLSTN1-205ENST00000477264 IGHV1-3A0A0C4DH29 117 aa11.84□□□□□ -0.51
CLSTN1-205ENST00000477264 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.84□□□□□ -0.51
CLSTN1-205ENST00000477264 C17orf100A8MU93 164 aa11.84□□□□□ -0.51
CLSTN1-205ENST00000477264 TNFRSF13BO14836 293 aaPredicted RBP11.84□□□□□ -0.51
CLSTN1-205ENST00000477264 ADIPOQQ15848 244 aa11.84□□□□□ -0.51
CLSTN1-205ENST00000477264 PSMG3-AS1Q96PY0 264 aa11.84□□□□□ -0.51
CLSTN1-205ENST00000477264 PGPEP1Q9NXJ5 209 aa11.84□□□□□ -0.51
CLSTN1-205ENST00000477264 KAAG1Q9UBP8 84 aa11.84□□□□□ -0.51
CLSTN1-205ENST00000477264 IGSF10Q6WRI0 2623 aa11.83□□□□□ -0.52
CLSTN1-205ENST00000477264 ORM1P02763 201 aa11.83□□□□□ -0.52
CLSTN1-205ENST00000477264 SLC25A16P16260 332 aa11.83□□□□□ -0.52
CLSTN1-205ENST00000477264 SMG1Q96Q15 3661 aaKnown RBP11.83□□□□□ -0.52
CLSTN1-205ENST00000477264 SCGB2A1O75556 95 aa11.82□□□□□ -0.52
CLSTN1-205ENST00000477264 ZNF80P51504 273 aaPredicted RBP11.82□□□□□ -0.52
CLSTN1-205ENST00000477264 CCL8P80075 99 aa11.82□□□□□ -0.52
CLSTN1-205ENST00000477264 DTX2Q86UW9 622 aa11.82□□□□□ -0.52
CLSTN1-205ENST00000477264 TEN1Q86WV5 123 aa11.82□□□□□ -0.52
CLSTN1-205ENST00000477264 FBXL15Q9H469 300 aa11.82□□□□□ -0.52
CLSTN1-205ENST00000477264 TMEM262E9PQX1 116 aa11.82□□□□□ -0.52
CLSTN1-205ENST00000477264 SMCPP49901 116 aaPredicted RBP11.82□□□□□ -0.52
CLSTN1-205ENST00000477264 MSRB1Q9NZV6 116 aa11.82□□□□□ -0.52
CLSTN1-205ENST00000477264 ICE1Q9Y2F5 2266 aa11.81□□□□□ -0.52
CLSTN1-205ENST00000477264 HIVEP3Q5T1R4 2406 aa11.81□□□□□ -0.52
CLSTN1-205ENST00000477264 K7EMI3 77 aa11.81□□□□□ -0.52
CLSTN1-205ENST00000477264 IGLV1-47P01700 117 aa11.81□□□□□ -0.52
CLSTN1-205ENST00000477264 MT-ATP8P03928 68 aa11.81□□□□□ -0.52
CLSTN1-205ENST00000477264 UBE2D1P51668 147 aa11.81□□□□□ -0.52
CLSTN1-205ENST00000477264 MALRD1Q5VYJ5 2156 aa11.81□□□□□ -0.52
CLSTN1-205ENST00000477264 TRBV20-1A0A075B6N2 111 aa11.81□□□□□ -0.52
CLSTN1-205ENST00000477264 RBAKDNA6NC62 111 aa11.81□□□□□ -0.52
CLSTN1-205ENST00000477264 MFAP4P55083 255 aa11.81□□□□□ -0.52
CLSTN1-205ENST00000477264 UBE2D3P61077 147 aa11.81□□□□□ -0.52
CLSTN1-205ENST00000477264 UBE2D2P62837 147 aa11.81□□□□□ -0.52
CLSTN1-205ENST00000477264 ZNF672Q499Z4 452 aaPredicted RBP11.81□□□□□ -0.52
CLSTN1-205ENST00000477264 GAS8-AS1O95177 125 aa11.8□□□□□ -0.52
CLSTN1-205ENST00000477264 XGP55808 180 aa11.8□□□□□ -0.52
CLSTN1-205ENST00000477264 ZNF575Q86XF7 245 aa11.8□□□□□ -0.52
CLSTN1-205ENST00000477264 NRACQ8N912 160 aa11.8□□□□□ -0.52
CLSTN1-205ENST00000477264 IGFBPL1Q8WX77 278 aa11.8□□□□□ -0.52
CLSTN1-205ENST00000477264 E7EQL1 145 aa11.79□□□□□ -0.52
CLSTN1-205ENST00000477264 LGALS1P09382 135 aaKnown RBP11.79□□□□□ -0.52
CLSTN1-205ENST00000477264 SBSPONQ8IVN8 264 aa11.79□□□□□ -0.52
CLSTN1-205ENST00000477264 Q8TAT8 98 aa11.79□□□□□ -0.52
CLSTN1-205ENST00000477264 ITLN2Q8WWU7 325 aaPredicted RBP11.79□□□□□ -0.52
CLSTN1-205ENST00000477264 CTSZQ9UBR2 303 aa11.79□□□□□ -0.52
CLSTN1-205ENST00000477264 BUB1B-PAK6H3BSN5 160 aa11.79□□□□□ -0.52
CLSTN1-205ENST00000477264 NDUFA3O95167 84 aa11.79□□□□□ -0.52
CLSTN1-205ENST00000477264 CNIH1O95406 144 aa11.79□□□□□ -0.52
CLSTN1-205ENST00000477264 ORMDL2Q53FV1 153 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms