RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 CAMLGP49069 296 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 PPT1P50897 306 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 PDE6HQ13956 83 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 ZNF846Q147U1 533 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 LINC01620Q4KN68 170 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 TMEM78Q5T7P6 136 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 EXOC3-AS1Q8N2X6 119 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 NHLRC2Q8NBF2 726 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 CHAC1Q9BUX1 264 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 TM2D2Q9BX73 214 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 TMEM14CQ9P0S9 112 aa7.49□□□□□ -1.21
BRCA1-213ENST00000476777 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.48□□□□□ -1.21
BRCA1-213ENST00000476777 TRAV8-6A0A0B4J262 113 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 FABP12A6NFH5 140 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 LECT2O14960 151 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 SCGB1D2O95969 90 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 SMIM18P0DKX4 95 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 HIST1H1EP10412 219 aaKnown RBP7.48□□□□□ -1.21
BRCA1-213ENST00000476777 TNFSF8P32971 234 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 AP3S2P59780 193 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 UBE2MP61081 183 aaKnown RBP7.48□□□□□ -1.21
BRCA1-213ENST00000476777 LAGE3Q14657 143 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 MUC21Q5SSG8 566 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 NRARPQ7Z6K4 114 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 TOMM5Q8N4H5 51 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 OR1L4Q8NGR5 311 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 PFDN5Q99471 154 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 SPXQ9BT56 116 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 TIMM9Q9Y5J7 89 aa7.48□□□□□ -1.21
BRCA1-213ENST00000476777 TRBV7-9A0A0J9YWB2 115 aa7.47□□□□□ -1.21
BRCA1-213ENST00000476777 C7orf66A4D0T2 115 aa7.47□□□□□ -1.21
BRCA1-213ENST00000476777 PYYP10082 97 aa7.47□□□□□ -1.21
BRCA1-213ENST00000476777 RAB31Q13636 194 aa7.47□□□□□ -1.21
BRCA1-213ENST00000476777 TMEM183BQ1AE95 376 aa7.47□□□□□ -1.21
BRCA1-213ENST00000476777 TDRG1Q3Y452 100 aa7.47□□□□□ -1.21
BRCA1-213ENST00000476777 OR10J3Q5JRS4 329 aa7.47□□□□□ -1.21
BRCA1-213ENST00000476777 TMEM183AQ8IXX5 376 aa7.47□□□□□ -1.21
BRCA1-213ENST00000476777 C12orf45Q8N5I9 185 aaPredicted RBP7.47□□□□□ -1.21
BRCA1-213ENST00000476777 OR4C5Q8NGB2 326 aa7.47□□□□□ -1.21
BRCA1-213ENST00000476777 Q8TAT8 98 aa7.47□□□□□ -1.21
BRCA1-213ENST00000476777 CIRBP-AS1Q8TBR5 109 aa7.47□□□□□ -1.21
BRCA1-213ENST00000476777 DYNC2LI1Q8TCX1 351 aa7.47□□□□□ -1.21
BRCA1-213ENST00000476777 PFN1P07737 140 aaKnown RBP7.46□□□□□ -1.22
BRCA1-213ENST00000476777 GATA1P15976 413 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-213ENST00000476777 ZNF138P52744 262 aa7.46□□□□□ -1.22
BRCA1-213ENST00000476777 ASAH1Q13510 395 aa7.46□□□□□ -1.22
BRCA1-213ENST00000476777 ZNF266Q14584 549 aa7.46□□□□□ -1.22
BRCA1-213ENST00000476777 IAH1Q2TAA2 248 aaPredicted RBP7.46□□□□□ -1.22
BRCA1-213ENST00000476777 FAM122CQ6P4D5 195 aa7.46□□□□□ -1.22
BRCA1-213ENST00000476777 AAMDCQ9H7C9 122 aa7.46□□□□□ -1.22
BRCA1-213ENST00000476777 SLC39A9Q9NUM3 307 aa7.46□□□□□ -1.22
BRCA1-213ENST00000476777 TRGV11A0A075B6L2 103 aa7.45□□□□□ -1.22
BRCA1-213ENST00000476777 IGHV3-16A0A0C4DH30 117 aa7.45□□□□□ -1.22
BRCA1-213ENST00000476777 MBPP02686 304 aaPredicted RBP7.45□□□□□ -1.22
BRCA1-213ENST00000476777 RPL29P47914 159 aaKnown RBP7.45□□□□□ -1.22
BRCA1-213ENST00000476777 LELP1Q5T871 98 aa7.45□□□□□ -1.22
BRCA1-213ENST00000476777 Q6AWC8 147 aa7.45□□□□□ -1.22
BRCA1-213ENST00000476777 DEDD2Q8WXF8 326 aa7.45□□□□□ -1.22
BRCA1-213ENST00000476777 SLIRPQ9GZT3 109 aaKnown RBP7.45□□□□□ -1.22
BRCA1-213ENST00000476777 GSKIPQ9P0R6 139 aa7.45□□□□□ -1.22
BRCA1-213ENST00000476777 WDR83OSQ9Y284 106 aa7.45□□□□□ -1.22
BRCA1-213ENST00000476777 TNXBP22105 4242 aa7.45□□□□□ -1.22
BRCA1-213ENST00000476777 M0R2P5 195 aa7.44□□□□□ -1.22
BRCA1-213ENST00000476777 RS1O15537 224 aa7.44□□□□□ -1.22
BRCA1-213ENST00000476777 IGLV2-8P01709 118 aa7.44□□□□□ -1.22
BRCA1-213ENST00000476777 HNRNPA3P51991 378 aaKnown RBP7.44□□□□□ -1.22
BRCA1-213ENST00000476777 PYDC2Q56P42 97 aa7.44□□□□□ -1.22
BRCA1-213ENST00000476777 SLC25A29Q8N8R3 303 aa7.44□□□□□ -1.22
BRCA1-213ENST00000476777 BAALCQ8WXS3 180 aa7.44□□□□□ -1.22
BRCA1-213ENST00000476777 TRAV8-3A0A0A6YYJ7 113 aa7.43□□□□□ -1.22
BRCA1-213ENST00000476777 RBFOX3A6NFN3 312 aa7.43□□□□□ -1.22
BRCA1-213ENST00000476777 CST7O76096 145 aa7.43□□□□□ -1.22
BRCA1-213ENST00000476777 MT1HL1P0DM35 61 aa7.43□□□□□ -1.22
BRCA1-213ENST00000476777 BAK1Q16611 211 aa7.43□□□□□ -1.22
BRCA1-213ENST00000476777 VWC2Q2TAL6 325 aa7.43□□□□□ -1.22
BRCA1-213ENST00000476777 ACOT6Q3I5F7 207 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-213ENST00000476777 FAM159AQ6UWV7 190 aa7.43□□□□□ -1.22
BRCA1-213ENST00000476777 CHAC2Q8WUX2 184 aa7.43□□□□□ -1.22
BRCA1-213ENST00000476777 DAZAP1Q96EP5 407 aaKnown RBP7.43□□□□□ -1.22
BRCA1-213ENST00000476777 SLC25A2Q9BXI2 301 aa7.43□□□□□ -1.22
BRCA1-213ENST00000476777 C20orf85Q9H1P6 137 aa7.43□□□□□ -1.22
BRCA1-213ENST00000476777 GPN1Q9HCN4 374 aaPredicted RBP7.43□□□□□ -1.22
BRCA1-213ENST00000476777 UQCC1Q9NVA1 299 aa7.43□□□□□ -1.22
BRCA1-213ENST00000476777 FLVCR2Q9UPI3 526 aa7.43□□□□□ -1.22
BRCA1-213ENST00000476777 GNRH2O43555 120 aa7.42□□□□□ -1.22
BRCA1-213ENST00000476777 NBEAP1P0C6P0 100 aa7.42□□□□□ -1.22
BRCA1-213ENST00000476777 GCSAMLQ5JQS6 135 aa7.42□□□□□ -1.22
BRCA1-213ENST00000476777 FAM167A-AS1Q96KT0 104 aa7.42□□□□□ -1.22
BRCA1-213ENST00000476777 PRADC1Q9BSG0 188 aa7.42□□□□□ -1.22
BRCA1-213ENST00000476777 GTSF1LQ9H1H1 148 aa7.42□□□□□ -1.22
BRCA1-213ENST00000476777 V9GYH0 126 aa7.42□□□□□ -1.22
BRCA1-213ENST00000476777 UBE2L5PA0A1B0GUS4 154 aa7.41□□□□□ -1.22
BRCA1-213ENST00000476777 RBAKDNA6NC62 111 aa7.41□□□□□ -1.22
BRCA1-213ENST00000476777 RNF222A6NCQ9 220 aa7.41□□□□□ -1.22
BRCA1-213ENST00000476777 FBLL1A6NHQ2 334 aaKnown RBP7.41□□□□□ -1.22
BRCA1-213ENST00000476777 L7N2F9 121 aa7.41□□□□□ -1.22
BRCA1-213ENST00000476777 NDUFB6O95139 128 aa7.41□□□□□ -1.22
BRCA1-213ENST00000476777 IGLV2-11P01706 119 aa7.41□□□□□ -1.22
BRCA1-213ENST00000476777 BCAP31P51572 246 aa7.41□□□□□ -1.22
BRCA1-213ENST00000476777 CAV2P51636 162 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms