RNA–Protein interactions for RNA: ENST00000476613.1

IRF1-209, Transcript of interferon regulatory factor 1, humanhuman

TSL 2

Gene IRF1, Length 523 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-209ENST00000476613 TMEM78Q5T7P6 136 aa5.68□□□□□ -1.5
IRF1-209ENST00000476613 TMUB2Q71RG4 321 aa5.68□□□□□ -1.5
IRF1-209ENST00000476613 TMED6Q8WW62 240 aa5.68□□□□□ -1.5
IRF1-209ENST00000476613 FRZBQ92765 325 aa5.68□□□□□ -1.5
IRF1-209ENST00000476613 LINC01587Q99440 93 aa5.68□□□□□ -1.5
IRF1-209ENST00000476613 ATG101Q9BSB4 218 aa5.68□□□□□ -1.5
IRF1-209ENST00000476613 DKK2Q9UBU2 259 aa5.68□□□□□ -1.5
IRF1-209ENST00000476613 LENEPQ9Y5L5 61 aa5.68□□□□□ -1.5
IRF1-209ENST00000476613 LOC102723971A0A1B0GUV8 181 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 SERTM2A0A1B0GWG4 89 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 KLLNB2CW77 178 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 UMAD1C9J7I0 102 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 HMGB3O15347 200 aaKnown RBP5.67□□□□□ -1.5
IRF1-209ENST00000476613 BCL2L11O43521 198 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 C1QBP02746 253 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 ZNF138P52744 262 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 TMEM88Q6PEY1 159 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 DPPA3Q6W0C5 159 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 ZNF493Q6ZR52 646 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 BAP18Q8IXM2 172 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 CMTM2Q8TAZ6 248 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 HYLS1Q96M11 299 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 VGLL1Q99990 258 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 LINC00467Q9BRT7 94 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 ZNF492Q9P255 531 aa5.67□□□□□ -1.5
IRF1-209ENST00000476613 IGKV2-40A0A087WW87 121 aaPredicted RBP5.66□□□□□ -1.5
IRF1-209ENST00000476613 A0A1W2PRE2 83 aa5.66□□□□□ -1.5
IRF1-209ENST00000476613 LYRM9A8MSI8 78 aa5.66□□□□□ -1.5
IRF1-209ENST00000476613 ZNF705GA8MUZ8 300 aaPredicted RBP5.66□□□□□ -1.5
IRF1-209ENST00000476613 ZNF324O75467 553 aaPredicted RBP5.66□□□□□ -1.5
IRF1-209ENST00000476613 EIF3GO75821 320 aaKnown RBP eCLIP5.66□□□□□ -1.5
IRF1-209ENST00000476613 IGKV2D-40P01614 121 aaPredicted RBP5.66□□□□□ -1.5
IRF1-209ENST00000476613 PRB4P10163 310 aaPredicted RBP5.66□□□□□ -1.5
IRF1-209ENST00000476613 KRTAP10-2P60368 255 aa5.66□□□□□ -1.5
IRF1-209ENST00000476613 ZNF726P1Q15940 193 aa5.66□□□□□ -1.5
IRF1-209ENST00000476613 LGALSLQ3ZCW2 172 aaPredicted RBP5.66□□□□□ -1.5
IRF1-209ENST00000476613 FAM222AQ5U5X8 452 aa5.66□□□□□ -1.5
IRF1-209ENST00000476613 Q5VSD8 79 aa5.66□□□□□ -1.5
IRF1-209ENST00000476613 GFI1BQ5VTD9 330 aa5.66□□□□□ -1.5
IRF1-209ENST00000476613 STOML3Q8TAV4 291 aa5.66□□□□□ -1.5
IRF1-209ENST00000476613 PYGO2Q9BRQ0 406 aa5.66□□□□□ -1.5
IRF1-209ENST00000476613 NKX6-2Q9C056 277 aaPredicted RBP5.66□□□□□ -1.5
IRF1-209ENST00000476613 PGPEP1Q9NXJ5 209 aa5.66□□□□□ -1.5
IRF1-209ENST00000476613 TRAV12-3A0A0B4J271 114 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 PLAC8L1A1L4L8 177 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 C7orf71A4D174 169 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 FBLL1A6NHQ2 334 aaKnown RBP5.65□□□□□ -1.5
IRF1-209ENST00000476613 PFDN1O60925 122 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 GPX1P07203 203 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 TPT1P13693 172 aaKnown RBP5.65□□□□□ -1.5
IRF1-209ENST00000476613 AZU1P20160 251 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 CCL18P55774 89 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 XGP55808 180 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 KIR3DS1Q14943 382 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 TTC32Q5I0X7 151 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 EIF5AL1Q6IS14 154 aaKnown RBP5.65□□□□□ -1.5
IRF1-209ENST00000476613 SSX7Q7RTT5 188 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 AKAP14Q86UN6 197 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 CCDC28AQ8IWP9 274 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 ZFAND2AQ8N6M9 145 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 C5orf17Q8NAS9 161 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 TMEM263Q8WUH6 116 aaKnown RBP5.65□□□□□ -1.5
IRF1-209ENST00000476613 MBD3L1Q8WWY6 194 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 C16orf74Q96GX8 76 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 ZNF471Q9BX82 626 aaPredicted RBP5.65□□□□□ -1.5
IRF1-209ENST00000476613 EPDR1Q9UM22 224 aa5.65□□□□□ -1.5
IRF1-209ENST00000476613 YTHDF2Q9Y5A9 579 aaKnown RBP5.65□□□□□ -1.5
IRF1-209ENST00000476613 TIMM8BQ9Y5J9 83 aaPredicted RBP5.65□□□□□ -1.5
IRF1-209ENST00000476613 A0A1W2PPQ1 181 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 J3QL48 77 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 K7EQM0 130 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 TCRAP04437 139 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 PRM2P04554 102 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 HTN3P15516 51 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 RNASE4P34096 147 aaKnown RBP5.64□□□□□ -1.51
IRF1-209ENST00000476613 FHITP49789 147 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 RAB5CP51148 216 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 EMP1P54849 157 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 SUMO1P63165 101 aaKnown RBP5.64□□□□□ -1.51
IRF1-209ENST00000476613 CD300CQ08708 224 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 ANXA2RQ3ZCQ2 193 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 SERTAD4-AS1Q5TG53 156 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 CDPF1Q6NVV7 123 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 RNASE8Q8TDE3 154 aaKnown RBP5.64□□□□□ -1.51
IRF1-209ENST00000476613 TCEAL7Q9BRU2 100 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 ARL2-SNX15V9GYD0 113 aa5.64□□□□□ -1.51
IRF1-209ENST00000476613 MYCBP2O75592 4640 aa5.63□□□□□ -1.51
IRF1-209ENST00000476613 MAP1LC3B2A6NCE7 125 aa5.63□□□□□ -1.51
IRF1-209ENST00000476613 FAM74A7A6NL05 159 aa5.63□□□□□ -1.51
IRF1-209ENST00000476613 GGTLC3B5MD39 225 aa5.63□□□□□ -1.51
IRF1-209ENST00000476613 HTN1P15515 57 aa5.63□□□□□ -1.51
IRF1-209ENST00000476613 DAD1P61803 113 aa5.63□□□□□ -1.51
IRF1-209ENST00000476613 DAZ2Q13117 558 aaKnown RBP5.63□□□□□ -1.51
IRF1-209ENST00000476613 Q6AWC8 147 aa5.63□□□□□ -1.51
IRF1-209ENST00000476613 GOLT1AQ6ZVE7 132 aa5.63□□□□□ -1.51
IRF1-209ENST00000476613 SLC51BQ86UW2 128 aa5.63□□□□□ -1.51
IRF1-209ENST00000476613 EIF4E3Q8N5X7 224 aaKnown RBP5.63□□□□□ -1.51
IRF1-209ENST00000476613 ZNF680Q8NEM1 530 aa5.63□□□□□ -1.51
IRF1-209ENST00000476613 MAP1LC3BQ9GZQ8 125 aa5.63□□□□□ -1.51
IRF1-209ENST00000476613 TMPRSS5Q9H3S3 457 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms