RNA–Protein interactions for RNA: ENST00000476395.1

VAPB-205, Transcript of VAMP associated protein B and C, humanhuman

TSL 2

Gene VAPB, Length 3,583 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-205ENST00000476395 SMCPP49901 116 aaPredicted RBP6.57□□□□□ -1.36
VAPB-205ENST00000476395 ZNF415Q09FC8 603 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 LGALS9BQ3B8N2 356 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 TMEM30BQ3MIR4 351 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 LGALS9CQ6DKI2 356 aa6.57□□□□□ -1.36
VAPB-205ENST00000476395 ACACBO00763 2458 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 C17orf100A8MU93 164 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 CRIP1P50238 77 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 HCP5Q6MZN7 132 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 OR4C13Q8NGP0 309 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 A0A0G2JNJ9 132 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 NPYP01303 97 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 ORM1P02763 201 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 Q86TA4 180 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 Q9UFV3 132 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 HHLA3Q9XRX5 114 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 APOMO95445 188 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 GAGE13Q4V321 117 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 TMEM155Q4W5P6 130 aa6.56□□□□□ -1.36
VAPB-205ENST00000476395 ITPR1Q14643 2758 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 COL6A6A6NMZ7 2263 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 MRPS12O15235 138 aaKnown RBP6.55□□□□□ -1.36
VAPB-205ENST00000476395 KIR2DL4Q99706 377 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 ZGRF1Q86YA3 2104 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 IGHV3-72A0A0B4J1Y9 119 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 F8W1H4 67 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 IGLV1-47P01700 117 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 GATA1P15976 413 aaPredicted RBP6.55□□□□□ -1.36
VAPB-205ENST00000476395 EVI2AP22794 236 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 BSPH1Q075Z2 132 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 CEND1Q8N111 149 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 KIR2DL5BQ8NHK3 375 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 IGFBPL1Q8WX77 278 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 PRELID3AQ96N28 172 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 C8orf49Q96NF6 230 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 TM2D2Q9BX73 214 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 PCNX1Q96RV3 2341 aa6.55□□□□□ -1.36
VAPB-205ENST00000476395 PAX8Q06710 450 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 TRGV9Q99603 122 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 M0R3E3 92 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 IGHV1-8P0DP01 117 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 C12orf74Q32Q52 190 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 ZC2HC1BQ5TFG8 222 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 SPANXA1Q9NS26 97 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 MSRB1Q9NZV6 116 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 ZNF492Q9P255 531 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 PRSS29PA6NIE9 313 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 SHISA9B4DS77 424 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 I3L2K1 104 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 HBDP02042 147 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 ERHP84090 104 aaKnown RBP6.54□□□□□ -1.36
VAPB-205ENST00000476395 MRPL51Q4U2R6 128 aaKnown RBP6.54□□□□□ -1.36
VAPB-205ENST00000476395 LYZL1Q6UWQ5 148 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 Q6ZUT4 128 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 CYSLTR1Q9Y271 337 aa6.54□□□□□ -1.36
VAPB-205ENST00000476395 A0A087WX48 190 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 FABP5P3A8MUU1 101 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 RBP4P02753 201 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 FOXI1Q12951 378 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 CT83Q5H943 113 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 GATD1Q8NB37 220 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 MAP1LC3AQ9H492 121 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 FAM57AQ8TBR7 257 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 BAALCQ8WXS3 180 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 KAAG1Q9UBP8 84 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 SOX21Q9Y651 276 aaPredicted RBP6.53□□□□□ -1.36
VAPB-205ENST00000476395 TRAV40A0A0B4J280 105 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 LY6LH3BQJ8 138 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 IGKV1-17P01599 117 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 ZFP2Q6ZN57 461 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 TMEM75Q8N9X5 138 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 Q8NA96 180 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 FMC1Q96HJ9 113 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 GFRA4Q9GZZ7 299 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 PKDREJQ9NTG1 2253 aa6.53□□□□□ -1.36
VAPB-205ENST00000476395 SPTAN1Q13813 2472 aaKnown RBP6.52□□□□□ -1.37
VAPB-205ENST00000476395 EPG5Q9HCE0 2579 aa6.52□□□□□ -1.37
VAPB-205ENST00000476395 TRBV20-1A0A075B6N2 111 aa6.52□□□□□ -1.37
VAPB-205ENST00000476395 TINCRA0A1B0GVN0 87 aa6.52□□□□□ -1.37
VAPB-205ENST00000476395 PRSS1P07477 247 aa6.52□□□□□ -1.37
VAPB-205ENST00000476395 FOXC2Q99958 501 aa6.52□□□□□ -1.37
VAPB-205ENST00000476395 SIGLEC9Q9Y336 463 aa6.52□□□□□ -1.37
VAPB-205ENST00000476395 POLEQ07864 2286 aa6.52□□□□□ -1.37
VAPB-205ENST00000476395 F8W735 103 aaPredicted RBP6.52□□□□□ -1.37
VAPB-205ENST00000476395 C8orf46Q8TAG6 207 aa6.52□□□□□ -1.37
VAPB-205ENST00000476395 FAM110DQ8TAY7 271 aaPredicted RBP6.52□□□□□ -1.37
VAPB-205ENST00000476395 DNAJC30Q96LL9 226 aa6.52□□□□□ -1.37
VAPB-205ENST00000476395 TMEM89A2RUT3 159 aa6.52□□□□□ -1.37
VAPB-205ENST00000476395 TMEM8BA6NDV4 472 aa6.52□□□□□ -1.37
VAPB-205ENST00000476395 C3orf56Q8N813 242 aa6.52□□□□□ -1.37
VAPB-205ENST00000476395 CARD19Q96LW7 228 aa6.52□□□□□ -1.37
VAPB-205ENST00000476395 PKD1L2Q7Z442 2459 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 E7EQL1 145 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 CT45A10P0DMU9 189 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 LEPP41159 167 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 LYZP61626 148 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 RIGQ13278 110 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 MORN3Q6PF18 240 aaPredicted RBP6.51□□□□□ -1.37
VAPB-205ENST00000476395 K7EIM0 57 aa6.51□□□□□ -1.37
VAPB-205ENST00000476395 NHLRC4P0CG21 123 aaPredicted RBP6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms