RNA–Protein interactions for RNA: ENST00000476342.1

HOXB3-208, Transcript of homeobox B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXB3, Length 1,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXB3-208ENST00000476342 C11orf94C9JXX5 98 aa21.25■□□□□ 0.99
HOXB3-208ENST00000476342 C3orf84H3BNL1 204 aa21.25■□□□□ 0.99
HOXB3-208ENST00000476342 ZNF324O75467 553 aaPredicted RBP21.25■□□□□ 0.99
HOXB3-208ENST00000476342 IFNA1P01562 189 aa21.25■□□□□ 0.99
HOXB3-208ENST00000476342 IGLV2-11P01706 119 aa21.25■□□□□ 0.99
HOXB3-208ENST00000476342 EMP1P54849 157 aa21.25■□□□□ 0.99
HOXB3-208ENST00000476342 PRNTQ86SH4 94 aa21.24■□□□□ 0.99
HOXB3-208ENST00000476342 C16orf74Q96GX8 76 aa21.24■□□□□ 0.99
HOXB3-208ENST00000476342 PRM2P04554 102 aa21.23■□□□□ 0.99
HOXB3-208ENST00000476342 TVP23CQ96ET8 276 aa21.23■□□□□ 0.99
HOXB3-208ENST00000476342 LINC00479Q96M42 142 aa21.23■□□□□ 0.99
HOXB3-208ENST00000476342 TXNDC17Q9BRA2 123 aa21.23■□□□□ 0.99
HOXB3-208ENST00000476342 TRAV34A0A0B4J273 112 aa21.22■□□□□ 0.99
HOXB3-208ENST00000476342 PMS2P11Q13670 270 aa21.22■□□□□ 0.99
HOXB3-208ENST00000476342 SAPCD1Q5SSQ6 148 aa21.22■□□□□ 0.99
HOXB3-208ENST00000476342 Q6AWC8 147 aa21.22■□□□□ 0.99
HOXB3-208ENST00000476342 ZNF493Q6ZR52 646 aa21.22■□□□□ 0.99
HOXB3-208ENST00000476342 TMEM263Q8WUH6 116 aaKnown RBP21.22■□□□□ 0.99
HOXB3-208ENST00000476342 TEX48A0A1B0GUV7 120 aa21.21■□□□□ 0.99
HOXB3-208ENST00000476342 CXorf65A6NEN9 183 aa21.21■□□□□ 0.99
HOXB3-208ENST00000476342 AKR1C3P42330 323 aa21.21■□□□□ 0.99
HOXB3-208ENST00000476342 UBE2G1P62253 170 aa21.21■□□□□ 0.99
HOXB3-208ENST00000476342 FMC1Q96HJ9 113 aa21.21■□□□□ 0.99
HOXB3-208ENST00000476342 RGS13O14921 159 aa21.21■□□□□ 0.99
HOXB3-208ENST00000476342 AZU1P20160 251 aa21.21■□□□□ 0.99
HOXB3-208ENST00000476342 LINC00467Q9BRT7 94 aa21.21■□□□□ 0.99
HOXB3-208ENST00000476342 SPART-AS1P0CW21 52 aa21.2■□□□□ 0.98
HOXB3-208ENST00000476342 RNASE8Q8TDE3 154 aaKnown RBP21.2■□□□□ 0.98
HOXB3-208ENST00000476342 CELA1Q9UNI1 258 aa21.2■□□□□ 0.98
HOXB3-208ENST00000476342 NANOS2P60321 138 aaKnown RBP21.19■□□□□ 0.98
HOXB3-208ENST00000476342 Q86TA4 180 aa21.19■□□□□ 0.98
HOXB3-208ENST00000476342 EIF4E3Q8N5X7 224 aaKnown RBP21.19■□□□□ 0.98
HOXB3-208ENST00000476342 TRAV21A0A0B4J279 112 aa21.18■□□□□ 0.98
HOXB3-208ENST00000476342 SCO2A0A1W2PP80 73 aa21.18■□□□□ 0.98
HOXB3-208ENST00000476342 TAGLN2P37802 199 aaKnown RBP21.18■□□□□ 0.98
HOXB3-208ENST00000476342 SMUG1Q53HV7 270 aa21.18■□□□□ 0.98
HOXB3-208ENST00000476342 TEX261Q6UWH6 196 aa21.18■□□□□ 0.98
HOXB3-208ENST00000476342 C8orf49Q96NF6 230 aa21.18■□□□□ 0.98
HOXB3-208ENST00000476342 DKK2Q9UBU2 259 aa21.18■□□□□ 0.98
HOXB3-208ENST00000476342 KLF12Q9Y4X4 402 aa21.18■□□□□ 0.98
HOXB3-208ENST00000476342 IGHV1OR15-1A0A075B7D0 117 aa21.17■□□□□ 0.98
HOXB3-208ENST00000476342 CBY3A6NI87 242 aa21.17■□□□□ 0.98
HOXB3-208ENST00000476342 BCL2P10415 239 aa21.17■□□□□ 0.98
HOXB3-208ENST00000476342 FAM222AQ5U5X8 452 aa21.17■□□□□ 0.98
HOXB3-208ENST00000476342 S100A9P06702 114 aaKnown RBP21.16■□□□□ 0.98
HOXB3-208ENST00000476342 MEF2BQ02080 365 aaPredicted RBP21.16■□□□□ 0.98
HOXB3-208ENST00000476342 TMEM183BQ1AE95 376 aa21.16■□□□□ 0.98
HOXB3-208ENST00000476342 ANXA2RQ3ZCQ2 193 aa21.16■□□□□ 0.98
HOXB3-208ENST00000476342 ZFAND6Q6FIF0 208 aa21.16■□□□□ 0.98
HOXB3-208ENST00000476342 Q6ZQT7 251 aa21.16■□□□□ 0.98
HOXB3-208ENST00000476342 ZNF680Q8NEM1 530 aa21.16■□□□□ 0.98
HOXB3-208ENST00000476342 LYPD6BQ8NI32 183 aa21.16■□□□□ 0.98
HOXB3-208ENST00000476342 ZFP30Q9Y2G7 519 aa21.16■□□□□ 0.98
HOXB3-208ENST00000476342 TRBV6-1A0A0K0K1D8 114 aa21.15■□□□□ 0.98
HOXB3-208ENST00000476342 PLAC8L1A1L4L8 177 aa21.15■□□□□ 0.98
HOXB3-208ENST00000476342 C2CD4CQ8TF44 421 aa21.15■□□□□ 0.98
HOXB3-208ENST00000476342 VAX2Q9UIW0 290 aa21.15■□□□□ 0.98
HOXB3-208ENST00000476342 TIMM8BQ9Y5J9 83 aaPredicted RBP21.15■□□□□ 0.98
HOXB3-208ENST00000476342 CSMD3Q7Z407 3707 aa21.14■□□□□ 0.98
HOXB3-208ENST00000476342 LYRM9A8MSI8 78 aa21.14■□□□□ 0.98
HOXB3-208ENST00000476342 GCGP01275 180 aa21.14■□□□□ 0.98
HOXB3-208ENST00000476342 CASC10Q5T4H9 136 aa21.14■□□□□ 0.98
HOXB3-208ENST00000476342 FAM159AQ6UWV7 190 aa21.14■□□□□ 0.98
HOXB3-208ENST00000476342 SNURFLB1AK76 121 aa21.13■□□□□ 0.97
HOXB3-208ENST00000476342 PDE6DO43924 150 aa21.13■□□□□ 0.97
HOXB3-208ENST00000476342 MUC21Q5SSG8 566 aa21.12■□□□□ 0.97
HOXB3-208ENST00000476342 C11orf52Q96A22 123 aa21.12■□□□□ 0.97
HOXB3-208ENST00000476342 PFN1P07737 140 aaKnown RBP21.12■□□□□ 0.97
HOXB3-208ENST00000476342 NAGKQ9UJ70 344 aa21.12■□□□□ 0.97
HOXB3-208ENST00000476342 NUPR2A6NF83 97 aa21.11■□□□□ 0.97
HOXB3-208ENST00000476342 LTAP01374 205 aa21.11■□□□□ 0.97
HOXB3-208ENST00000476342 C12orf74Q32Q52 190 aa21.11■□□□□ 0.97
HOXB3-208ENST00000476342 PHLDA1Q8WV24 401 aaPredicted RBP21.11■□□□□ 0.97
HOXB3-208ENST00000476342 ZNF80P51504 273 aaPredicted RBP21.1■□□□□ 0.97
HOXB3-208ENST00000476342 IBA57Q5T440 356 aaKnown RBP21.1■□□□□ 0.97
HOXB3-208ENST00000476342 Q6ZTC4 211 aa21.1■□□□□ 0.97
HOXB3-208ENST00000476342 ZNF767PQ75MW2 155 aa21.1■□□□□ 0.97
HOXB3-208ENST00000476342 TDRG1Q3Y452 100 aa21.09■□□□□ 0.97
HOXB3-208ENST00000476342 KCNS1Q96KK3 526 aa21.09■□□□□ 0.97
HOXB3-208ENST00000476342 NOP10Q9NPE3 64 aaKnown RBP21.09■□□□□ 0.97
HOXB3-208ENST00000476342 TP53TG3Q9ULZ0 132 aa21.09■□□□□ 0.97
HOXB3-208ENST00000476342 DAD1P61803 113 aa21.08■□□□□ 0.97
HOXB3-208ENST00000476342 C11orf72Q8NBR9 251 aa21.08■□□□□ 0.97
HOXB3-208ENST00000476342 STARD9Q9P2P6 4700 aa21.08■□□□□ 0.96
HOXB3-208ENST00000476342 TRGV11A0A075B6L2 103 aa21.07■□□□□ 0.96
HOXB3-208ENST00000476342 COX8CQ7Z4L0 72 aa21.07■□□□□ 0.96
HOXB3-208ENST00000476342 GSN-AS1Q9NRJ2 163 aa21.07■□□□□ 0.96
HOXB3-208ENST00000476342 RBFOX3A6NFN3 312 aa21.06■□□□□ 0.96
HOXB3-208ENST00000476342 RPL35P42766 123 aaKnown RBP21.06■□□□□ 0.96
HOXB3-208ENST00000476342 ZNF415Q09FC8 603 aa21.06■□□□□ 0.96
HOXB3-208ENST00000476342 DAZ2Q13117 558 aaKnown RBP21.06■□□□□ 0.96
HOXB3-208ENST00000476342 CEMP1Q6PRD7 247 aaPredicted RBP21.06■□□□□ 0.96
HOXB3-208ENST00000476342 TMEM183AQ8IXX5 376 aa21.06■□□□□ 0.96
HOXB3-208ENST00000476342 SDF2L1Q9HCN8 221 aa21.06■□□□□ 0.96
HOXB3-208ENST00000476342 TRAV10A0A0B4J240 114 aa21.05■□□□□ 0.96
HOXB3-208ENST00000476342 FABP5P3A8MUU1 101 aa21.05■□□□□ 0.96
HOXB3-208ENST00000476342 TCL1AP56279 114 aa21.05■□□□□ 0.96
HOXB3-208ENST00000476342 ZC2HC1AQ96GY0 325 aa21.05■□□□□ 0.96
HOXB3-208ENST00000476342 MED9Q9NWA0 146 aa21.05■□□□□ 0.96
HOXB3-208ENST00000476342 DEFB130BP0DP73 79 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms