RNA–Protein interactions for RNA: ENST00000475551.5

CCM2-207, Transcript of CCM2 scaffold protein, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CCM2, Length 2,471 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-207ENST00000475551 APOMO95445 188 aa13.74□□□□□ -0.21
CCM2-207ENST00000475551 RALYQ9UKM9 306 aaKnown RBP13.74□□□□□ -0.21
CCM2-207ENST00000475551 F8W735 103 aaPredicted RBP13.73□□□□□ -0.21
CCM2-207ENST00000475551 FOXI1Q12951 378 aa13.73□□□□□ -0.21
CCM2-207ENST00000475551 MTURNQ8N3F0 131 aa13.73□□□□□ -0.21
CCM2-207ENST00000475551 MRPL16Q9NX20 251 aaKnown RBP13.73□□□□□ -0.21
CCM2-207ENST00000475551 SMAD5-AS1Q9Y6J3 95 aa13.73□□□□□ -0.21
CCM2-207ENST00000475551 IGFL3Q6UXB1 125 aa13.73□□□□□ -0.21
CCM2-207ENST00000475551 FANCD2OSQ96PS1 177 aa13.73□□□□□ -0.21
CCM2-207ENST00000475551 IGLV11-55A0A075B6I3 123 aa13.72□□□□□ -0.21
CCM2-207ENST00000475551 TRAV12-1A0A0B4J245 112 aa13.72□□□□□ -0.21
CCM2-207ENST00000475551 MYMXA0A1B0GTQ4 84 aa13.72□□□□□ -0.21
CCM2-207ENST00000475551 MORN3Q6PF18 240 aaPredicted RBP13.72□□□□□ -0.21
CCM2-207ENST00000475551 IL17RELQ6ZVW7 336 aa13.72□□□□□ -0.21
CCM2-207ENST00000475551 NRACQ8N912 160 aa13.72□□□□□ -0.21
CCM2-207ENST00000475551 C20orf78Q9BR46 151 aa13.72□□□□□ -0.21
CCM2-207ENST00000475551 C1QTNF4Q9BXJ3 329 aa13.72□□□□□ -0.21
CCM2-207ENST00000475551 HOXA3O43365 443 aaPredicted RBP13.72□□□□□ -0.21
CCM2-207ENST00000475551 BSPH1Q075Z2 132 aa13.72□□□□□ -0.21
CCM2-207ENST00000475551 RNASE6Q93091 150 aaKnown RBP13.72□□□□□ -0.21
CCM2-207ENST00000475551 PRORYQ9H606 182 aa13.72□□□□□ -0.21
CCM2-207ENST00000475551 TRAV26-1A0A087WT03 109 aa13.71□□□□□ -0.21
CCM2-207ENST00000475551 NDUFA3O95167 84 aa13.71□□□□□ -0.21
CCM2-207ENST00000475551 COX7A1P24310 79 aa13.71□□□□□ -0.21
CCM2-207ENST00000475551 HLA-DMBP28068 263 aa13.71□□□□□ -0.21
CCM2-207ENST00000475551 KLRD1Q13241 179 aa13.71□□□□□ -0.21
CCM2-207ENST00000475551 Q5PR19 223 aa13.71□□□□□ -0.21
CCM2-207ENST00000475551 BSNQ9UPA5 3926 aa13.71□□□□□ -0.21
CCM2-207ENST00000475551 F8VRH5 84 aa13.71□□□□□ -0.21
CCM2-207ENST00000475551 H7C1H1 209 aa13.71□□□□□ -0.21
CCM2-207ENST00000475551 NBR2O15453 112 aa13.71□□□□□ -0.21
CCM2-207ENST00000475551 CFAP126Q5VTH2 177 aa13.71□□□□□ -0.21
CCM2-207ENST00000475551 IGFL4Q6B9Z1 124 aa13.71□□□□□ -0.21
CCM2-207ENST00000475551 PPIFP30405 207 aaKnown RBP13.7□□□□□ -0.22
CCM2-207ENST00000475551 C8orf86Q6ZUL3 223 aa13.7□□□□□ -0.22
CCM2-207ENST00000475551 CDIP1Q9H305 208 aa13.7□□□□□ -0.22
CCM2-207ENST00000475551 GEMIN7Q9H840 131 aaKnown RBP13.7□□□□□ -0.22
CCM2-207ENST00000475551 CYSLTR1Q9Y271 337 aa13.7□□□□□ -0.22
CCM2-207ENST00000475551 OR11H12B2RN74 326 aa13.7□□□□□ -0.22
CCM2-207ENST00000475551 TIMM23O14925 209 aa13.7□□□□□ -0.22
CCM2-207ENST00000475551 LCNL1Q6ZST4 164 aa13.7□□□□□ -0.22
CCM2-207ENST00000475551 DYNAPQ8N1N2 210 aa13.7□□□□□ -0.22
CCM2-207ENST00000475551 OR11H1Q8NG94 326 aa13.7□□□□□ -0.22
CCM2-207ENST00000475551 OR11H2Q8NH07 326 aa13.7□□□□□ -0.22
CCM2-207ENST00000475551 ZNF418Q8TF45 676 aaPredicted RBP13.7□□□□□ -0.22
CCM2-207ENST00000475551 C21orf62Q9NYP8 219 aa13.7□□□□□ -0.22
CCM2-207ENST00000475551 AGRNO00468 2067 aa13.69□□□□□ -0.22
CCM2-207ENST00000475551 TRGV3P03979 118 aa13.69□□□□□ -0.22
CCM2-207ENST00000475551 SYT8Q8NBV8 401 aa13.69□□□□□ -0.22
CCM2-207ENST00000475551 NPBQ8NG41 125 aa13.69□□□□□ -0.22
CCM2-207ENST00000475551 CFHR4Q92496 578 aa13.69□□□□□ -0.22
CCM2-207ENST00000475551 IGKV3D-20A0A0C4DH25 116 aa13.69□□□□□ -0.22
CCM2-207ENST00000475551 CRYBA4P53673 196 aa13.69□□□□□ -0.22
CCM2-207ENST00000475551 ERCC8Q13216 396 aa13.69□□□□□ -0.22
CCM2-207ENST00000475551 WFDC12Q8WWY7 111 aa13.69□□□□□ -0.22
CCM2-207ENST00000475551 DLX4Q92988 240 aaPredicted RBP13.69□□□□□ -0.22
CCM2-207ENST00000475551 RBAKDNA6NC62 111 aa13.68□□□□□ -0.22
CCM2-207ENST00000475551 SMCPP49901 116 aaPredicted RBP13.68□□□□□ -0.22
CCM2-207ENST00000475551 IGFBPL1Q8WX77 278 aa13.68□□□□□ -0.22
CCM2-207ENST00000475551 PGPEP1Q9NXJ5 209 aa13.68□□□□□ -0.22
CCM2-207ENST00000475551 EFNA4P52798 201 aa13.68□□□□□ -0.22
CCM2-207ENST00000475551 DYNLRB1Q9NP97 96 aa13.67□□□□□ -0.22
CCM2-207ENST00000475551 SH3BGRL2Q9UJC5 107 aa13.67□□□□□ -0.22
CCM2-207ENST00000475551 ITPR1Q14643 2758 aa13.67□□□□□ -0.22
CCM2-207ENST00000475551 PIEZO2Q9H5I5 2752 aa13.66□□□□□ -0.22
CCM2-207ENST00000475551 A6NJY4 79 aa13.66□□□□□ -0.22
CCM2-207ENST00000475551 LGALS1P09382 135 aaKnown RBP13.66□□□□□ -0.22
CCM2-207ENST00000475551 IGHV4-4A0A075B6R2 117 aa13.66□□□□□ -0.22
CCM2-207ENST00000475551 PRAC2D3DTV9 90 aa13.66□□□□□ -0.22
CCM2-207ENST00000475551 SCGB2A1O75556 95 aa13.66□□□□□ -0.22
CCM2-207ENST00000475551 SPINK8P0C7L1 97 aa13.66□□□□□ -0.22
CCM2-207ENST00000475551 ACACBO00763 2458 aa13.65□□□□□ -0.22
CCM2-207ENST00000475551 TRAV26-2A0A0B4J265 109 aa13.65□□□□□ -0.22
CCM2-207ENST00000475551 IGHV7-4-1A0A0J9YVY3 117 aa13.65□□□□□ -0.22
CCM2-207ENST00000475551 NFE4Q86UQ8 179 aa13.65□□□□□ -0.22
CCM2-207ENST00000475551 FAM57AQ8TBR7 257 aa13.65□□□□□ -0.22
CCM2-207ENST00000475551 C11orf21Q9P2W6 132 aa13.65□□□□□ -0.22
CCM2-207ENST00000475551 CTSGP08311 255 aa13.65□□□□□ -0.22
CCM2-207ENST00000475551 C5orf64Q2M2E5 130 aa13.65□□□□□ -0.22
CCM2-207ENST00000475551 MAP1BP46821 2468 aaKnown RBP13.64□□□□□ -0.23
CCM2-207ENST00000475551 SLC25A16P16260 332 aa13.64□□□□□ -0.23
CCM2-207ENST00000475551 UBE2D1P51668 147 aa13.64□□□□□ -0.23
CCM2-207ENST00000475551 TMEM78Q5T7P6 136 aa13.64□□□□□ -0.23
CCM2-207ENST00000475551 NEXN-AS1Q8NBZ9 246 aa13.64□□□□□ -0.23
CCM2-207ENST00000475551 OR11H6Q8NGC7 330 aa13.64□□□□□ -0.23
CCM2-207ENST00000475551 SMIM2Q9BVW6 85 aa13.64□□□□□ -0.23
CCM2-207ENST00000475551 SMG1Q96Q15 3661 aaKnown RBP13.63□□□□□ -0.23
CCM2-207ENST00000475551 IGHV3-23P01764 117 aa13.63□□□□□ -0.23
CCM2-207ENST00000475551 LY6DQ14210 128 aa13.63□□□□□ -0.23
CCM2-207ENST00000475551 Q8NA96 180 aa13.63□□□□□ -0.23
CCM2-207ENST00000475551 TOMM6Q96B49 74 aa13.63□□□□□ -0.23
CCM2-207ENST00000475551 UFC1Q9Y3C8 167 aa13.63□□□□□ -0.23
CCM2-207ENST00000475551 TPRP12270 2363 aaKnown RBP13.63□□□□□ -0.23
CCM2-207ENST00000475551 LINC01549A6NIU2 74 aa13.63□□□□□ -0.23
CCM2-207ENST00000475551 ORMDL2Q53FV1 153 aa13.63□□□□□ -0.23
CCM2-207ENST00000475551 Q6ZUT4 128 aa13.63□□□□□ -0.23
CCM2-207ENST00000475551 VCX2Q9H322 139 aa13.63□□□□□ -0.23
CCM2-207ENST00000475551 DPM3Q9P2X0 92 aa13.63□□□□□ -0.23
CCM2-207ENST00000475551 PKD1L2Q7Z442 2459 aa13.62□□□□□ -0.23
CCM2-207ENST00000475551 ZGRF1Q86YA3 2104 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms