RNA–Protein interactions for RNA: ENST00000475549.1

HDAC3-207, Transcript of histone deacetylase 3, humanhuman

TSL 2

Gene HDAC3, Length 297 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-207ENST00000475549 Q8TAT8 98 aa4.8□□□□□ -1.64
HDAC3-207ENST00000475549 ST6GAL2Q96JF0 529 aa4.8□□□□□ -1.64
HDAC3-207ENST00000475549 WDR61Q9GZS3 305 aaKnown RBP4.8□□□□□ -1.64
HDAC3-207ENST00000475549 OR51M1Q9H341 326 aa4.8□□□□□ -1.64
HDAC3-207ENST00000475549 MRPL16Q9NX20 251 aaKnown RBP4.8□□□□□ -1.64
HDAC3-207ENST00000475549 MDFICQ9P1T7 246 aa4.8□□□□□ -1.64
HDAC3-207ENST00000475549 PRELID1Q9Y255 219 aa4.8□□□□□ -1.64
HDAC3-207ENST00000475549 IGHV1OR15-1A0A075B7D0 117 aa4.79□□□□□ -1.64
HDAC3-207ENST00000475549 E5RGE8 158 aa4.79□□□□□ -1.64
HDAC3-207ENST00000475549 BTF3P20290 206 aaKnown RBP4.79□□□□□ -1.64
HDAC3-207ENST00000475549 ZNF138P52744 262 aa4.79□□□□□ -1.64
HDAC3-207ENST00000475549 CRYBA4P53673 196 aa4.79□□□□□ -1.64
HDAC3-207ENST00000475549 LINC00315P59091 139 aa4.79□□□□□ -1.64
HDAC3-207ENST00000475549 RANP62826 216 aaKnown RBP4.79□□□□□ -1.64
HDAC3-207ENST00000475549 MZT2BQ6NZ67 158 aa4.79□□□□□ -1.64
HDAC3-207ENST00000475549 LINC00299Q6ZSB3 139 aa4.79□□□□□ -1.64
HDAC3-207ENST00000475549 Q8N1X5 172 aa4.79□□□□□ -1.64
HDAC3-207ENST00000475549 C8orf49Q96NF6 230 aa4.79□□□□□ -1.64
HDAC3-207ENST00000475549 PAXXQ9BUH6 204 aa4.79□□□□□ -1.64
HDAC3-207ENST00000475549 NMES1Q9C002 83 aa4.79□□□□□ -1.64
HDAC3-207ENST00000475549 HHLA3Q9XRX5 114 aa4.79□□□□□ -1.64
HDAC3-207ENST00000475549 MUC4Q99102 2169 aa4.79□□□□□ -1.64
HDAC3-207ENST00000475549 TRBV7-9A0A0J9YWB2 115 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 RGS13O14921 159 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 PAX4O43316 350 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 PRAF2O60831 178 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 UPK1BO75841 260 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 NXPH4O95158 308 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 ZNF266Q14584 549 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 TTC32Q5I0X7 151 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 MUC21Q5SSG8 566 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 IBA57Q5T440 356 aaKnown RBP4.78□□□□□ -1.64
HDAC3-207ENST00000475549 TMEM78Q5T7P6 136 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 PPP1R1CQ8WVI7 109 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 TVP23CQ96ET8 276 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 ZNF479Q96JC4 524 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 SLC25A31Q9H0C2 315 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 AAMDCQ9H7C9 122 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 WFDC1Q9HC57 220 aa4.78□□□□□ -1.64
HDAC3-207ENST00000475549 HERC1Q15751 4861 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 RBAKDNA6NC62 111 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 DIRC3C9JPN6 131 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 INMT-MINDY4F8WBC2 141 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 K7EQD1 137 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 SIVA1O15304 175 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 GNRH2O43555 120 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 SFTA3P0C7M3 94 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 Q6AWC8 147 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 IQCF2Q8IXL9 164 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 ENKURQ8TC29 256 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 S100ZQ8WXG8 99 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 RASL10AQ92737 203 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 ATP5SQ99766 215 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 MARVELD1Q9BSK0 173 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 MRPL32Q9BYC8 188 aaKnown RBP4.77□□□□□ -1.65
HDAC3-207ENST00000475549 SMIM3Q9BZL3 60 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 SCRT2Q9NQ03 307 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 PRO0255Q9UI72 69 aa4.77□□□□□ -1.65
HDAC3-207ENST00000475549 OR7C2O60412 319 aa4.76□□□□□ -1.65
HDAC3-207ENST00000475549 MPC2O95563 127 aa4.76□□□□□ -1.65
HDAC3-207ENST00000475549 XGP55808 180 aa4.76□□□□□ -1.65
HDAC3-207ENST00000475549 CYCSP99999 105 aaKnown RBP4.76□□□□□ -1.65
HDAC3-207ENST00000475549 TDRG1Q3Y452 100 aa4.76□□□□□ -1.65
HDAC3-207ENST00000475549 FFAR4Q5NUL3 377 aa4.76□□□□□ -1.65
HDAC3-207ENST00000475549 LYPD1Q8N2G4 141 aa4.76□□□□□ -1.65
HDAC3-207ENST00000475549 HYLS1Q96M11 299 aa4.76□□□□□ -1.65
HDAC3-207ENST00000475549 MBD2Q9UBB5 411 aa4.76□□□□□ -1.65
HDAC3-207ENST00000475549 HSPB11Q9Y547 144 aa4.76□□□□□ -1.65
HDAC3-207ENST00000475549 ICOSQ9Y6W8 199 aa4.76□□□□□ -1.65
HDAC3-207ENST00000475549 FAT1Q14517 4588 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 TRAV8-1A0A0A6YYK1 113 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 IGHV3-16A0A0C4DH30 117 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 LOC100131303A0A0U1RQF7 123 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 PGPA6NDG6 321 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 C17orf112F2Z3M2 114 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 DNAH10OSP0CZ25 163 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 RPL12P30050 165 aaKnown RBP4.75□□□□□ -1.65
HDAC3-207ENST00000475549 CSN1S1P47710 185 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 UBE2L3P68036 154 aaKnown RBP4.75□□□□□ -1.65
HDAC3-207ENST00000475549 SLAQ13239 276 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 MRPL23Q16540 153 aaKnown RBP4.75□□□□□ -1.65
HDAC3-207ENST00000475549 TMEM183BQ1AE95 376 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 NEGR1Q7Z3B1 354 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 WFDC10BQ8IUB3 73 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 TMEM183AQ8IXX5 376 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 OR10G4Q8NGN3 311 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 ARPC5LQ9BPX5 153 aa4.75□□□□□ -1.65
HDAC3-207ENST00000475549 A0A087WTM6 91 aa4.74□□□□□ -1.65
HDAC3-207ENST00000475549 TRGV4A0A0C4DH28 118 aa4.74□□□□□ -1.65
HDAC3-207ENST00000475549 HMGB3O15347 200 aaKnown RBP4.74□□□□□ -1.65
HDAC3-207ENST00000475549 GYPEP15421 78 aa4.74□□□□□ -1.65
HDAC3-207ENST00000475549 ZNF80P51504 273 aaPredicted RBP4.74□□□□□ -1.65
HDAC3-207ENST00000475549 KRTAP10-1P60331 282 aa4.74□□□□□ -1.65
HDAC3-207ENST00000475549 RAB2AP61019 212 aa4.74□□□□□ -1.65
HDAC3-207ENST00000475549 GNG5P63218 68 aa4.74□□□□□ -1.65
HDAC3-207ENST00000475549 ZNF415Q09FC8 603 aa4.74□□□□□ -1.65
HDAC3-207ENST00000475549 FAM159AQ6UWV7 190 aa4.74□□□□□ -1.65
HDAC3-207ENST00000475549 TMED6Q8WW62 240 aa4.74□□□□□ -1.65
HDAC3-207ENST00000475549 SGK494Q96LW2 274 aa4.74□□□□□ -1.65
HDAC3-207ENST00000475549 OTORQ9NRC9 128 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms