RNA–Protein interactions for RNA: ENST00000474962.1

CLIP2-204, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

TSL 3

Gene CLIP2, Length 690 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-204ENST00000474962 ATG101Q9BSB4 218 aa8.56□□□□□ -1.04
CLIP2-204ENST00000474962 C11orf68Q9H3H3 251 aaKnown RBP8.56□□□□□ -1.04
CLIP2-204ENST00000474962 TRAV12-2A0A075B6T6 113 aa8.55□□□□□ -1.04
CLIP2-204ENST00000474962 C11orf94C9JXX5 98 aa8.55□□□□□ -1.04
CLIP2-204ENST00000474962 PEX7O00628 323 aa8.55□□□□□ -1.04
CLIP2-204ENST00000474962 RAB14P61106 215 aa8.55□□□□□ -1.04
CLIP2-204ENST00000474962 UBE2G1P62253 170 aa8.55□□□□□ -1.04
CLIP2-204ENST00000474962 CCL20P78556 96 aa8.55□□□□□ -1.04
CLIP2-204ENST00000474962 Q8NAQ8 132 aa8.55□□□□□ -1.04
CLIP2-204ENST00000474962 IGF2BP2-AS1Q96M15 143 aa8.55□□□□□ -1.04
CLIP2-204ENST00000474962 ZNF492Q9P255 531 aa8.55□□□□□ -1.04
CLIP2-204ENST00000474962 IGHV4-28A0A0C4DH34 117 aa8.54□□□□□ -1.04
CLIP2-204ENST00000474962 AKR1C3P42330 323 aa8.54□□□□□ -1.04
CLIP2-204ENST00000474962 ATP5G3P48201 142 aa8.54□□□□□ -1.04
CLIP2-204ENST00000474962 LGALS9CQ6DKI2 356 aa8.54□□□□□ -1.04
CLIP2-204ENST00000474962 PRNTQ86SH4 94 aa8.54□□□□□ -1.04
CLIP2-204ENST00000474962 CSNK1G2-AS1Q8NCQ2 148 aa8.54□□□□□ -1.04
CLIP2-204ENST00000474962 SGK494Q96LW2 274 aa8.54□□□□□ -1.04
CLIP2-204ENST00000474962 LINC01587Q99440 93 aa8.54□□□□□ -1.04
CLIP2-204ENST00000474962 NIPSNAP3BQ9BS92 247 aa8.54□□□□□ -1.04
CLIP2-204ENST00000474962 LENEPQ9Y5L5 61 aa8.54□□□□□ -1.04
CLIP2-204ENST00000474962 X6R8D5 127 aa8.54□□□□□ -1.04
CLIP2-204ENST00000474962 TRAV8-1A0A0A6YYK1 113 aa8.53□□□□□ -1.04
CLIP2-204ENST00000474962 TRBV7-9A0A0J9YWB2 115 aa8.53□□□□□ -1.04
CLIP2-204ENST00000474962 NMBP08949 121 aa8.53□□□□□ -1.04
CLIP2-204ENST00000474962 HTN1P15515 57 aa8.53□□□□□ -1.04
CLIP2-204ENST00000474962 RNASE4P34096 147 aaKnown RBP8.53□□□□□ -1.04
CLIP2-204ENST00000474962 FLI1Q01543 452 aaPredicted RBP8.53□□□□□ -1.04
CLIP2-204ENST00000474962 TMEM256Q8N2U0 113 aa8.53□□□□□ -1.04
CLIP2-204ENST00000474962 TMEM75Q8N9X5 138 aa8.53□□□□□ -1.04
CLIP2-204ENST00000474962 Q8TAT8 98 aa8.53□□□□□ -1.04
CLIP2-204ENST00000474962 C2CD4CQ8TF44 421 aa8.53□□□□□ -1.04
CLIP2-204ENST00000474962 TREM1Q9NP99 234 aa8.53□□□□□ -1.04
CLIP2-204ENST00000474962 VAX2Q9UIW0 290 aa8.53□□□□□ -1.04
CLIP2-204ENST00000474962 PSG8Q9UQ74 426 aa8.53□□□□□ -1.04
CLIP2-204ENST00000474962 TRAV12-3A0A0B4J271 114 aa8.52□□□□□ -1.05
CLIP2-204ENST00000474962 TRAV34A0A0B4J273 112 aa8.52□□□□□ -1.05
CLIP2-204ENST00000474962 IGLL5B9A064 214 aa8.52□□□□□ -1.05
CLIP2-204ENST00000474962 PDE6DO43924 150 aa8.52□□□□□ -1.05
CLIP2-204ENST00000474962 S100A9P06702 114 aaKnown RBP8.52□□□□□ -1.05
CLIP2-204ENST00000474962 BCL2P10415 239 aa8.52□□□□□ -1.05
CLIP2-204ENST00000474962 CRISP2P16562 243 aa8.52□□□□□ -1.05
CLIP2-204ENST00000474962 MEF2BQ02080 365 aaPredicted RBP8.52□□□□□ -1.05
CLIP2-204ENST00000474962 SAPCD1Q5SSQ6 148 aa8.52□□□□□ -1.05
CLIP2-204ENST00000474962 CCDC28AQ8IWP9 274 aa8.52□□□□□ -1.05
CLIP2-204ENST00000474962 FMC1Q96HJ9 113 aa8.52□□□□□ -1.05
CLIP2-204ENST00000474962 C20orf144Q9BQM9 153 aa8.52□□□□□ -1.05
CLIP2-204ENST00000474962 EIF5A2Q9GZV4 153 aaKnown RBP8.52□□□□□ -1.05
CLIP2-204ENST00000474962 C7orf71A4D174 169 aa8.51□□□□□ -1.05
CLIP2-204ENST00000474962 RBFOX3A6NFN3 312 aa8.51□□□□□ -1.05
CLIP2-204ENST00000474962 SMIM9A6NGZ8 99 aa8.51□□□□□ -1.05
CLIP2-204ENST00000474962 H7BYZ3 331 aa8.51□□□□□ -1.05
CLIP2-204ENST00000474962 CRXO43186 299 aaPredicted RBP8.51□□□□□ -1.05
CLIP2-204ENST00000474962 MIFP14174 115 aa8.51□□□□□ -1.05
CLIP2-204ENST00000474962 RRN3P1Q2M238 152 aa8.51□□□□□ -1.05
CLIP2-204ENST00000474962 GFI1BQ5VTD9 330 aa8.51□□□□□ -1.05
CLIP2-204ENST00000474962 LYPD6BQ8NI32 183 aa8.51□□□□□ -1.05
CLIP2-204ENST00000474962 LINC00479Q96M42 142 aa8.51□□□□□ -1.05
CLIP2-204ENST00000474962 APLNQ9ULZ1 77 aa8.51□□□□□ -1.05
CLIP2-204ENST00000474962 DNAH6Q9C0G6 4158 aa8.51□□□□□ -1.05
CLIP2-204ENST00000474962 SCO2A0A1W2PP80 73 aa8.5□□□□□ -1.05
CLIP2-204ENST00000474962 KLLNB2CW77 178 aa8.5□□□□□ -1.05
CLIP2-204ENST00000474962 RGS13O14921 159 aa8.5□□□□□ -1.05
CLIP2-204ENST00000474962 BTN1A1Q13410 526 aa8.5□□□□□ -1.05
CLIP2-204ENST00000474962 KIR3DS1Q14943 382 aa8.5□□□□□ -1.05
CLIP2-204ENST00000474962 SMUG1Q53HV7 270 aa8.5□□□□□ -1.05
CLIP2-204ENST00000474962 ZNF705AQ6ZN79 300 aaPredicted RBP8.5□□□□□ -1.05
CLIP2-204ENST00000474962 Q6ZTC4 211 aa8.5□□□□□ -1.05
CLIP2-204ENST00000474962 ZNF767PQ75MW2 155 aa8.5□□□□□ -1.05
CLIP2-204ENST00000474962 C1orf158Q8N1D5 194 aa8.5□□□□□ -1.05
CLIP2-204ENST00000474962 PCNPQ8WW12 178 aaKnown RBP8.5□□□□□ -1.05
CLIP2-204ENST00000474962 FAM19A4Q96LR4 140 aa8.5□□□□□ -1.05
CLIP2-204ENST00000474962 NEU1Q99519 415 aa8.5□□□□□ -1.05
CLIP2-204ENST00000474962 MED9Q9NWA0 146 aa8.5□□□□□ -1.05
CLIP2-204ENST00000474962 ZFP30Q9Y2G7 519 aa8.5□□□□□ -1.05
CLIP2-204ENST00000474962 LOC102723971A0A1B0GUV8 181 aa8.49□□□□□ -1.05
CLIP2-204ENST00000474962 TAS2R60P59551 318 aa8.49□□□□□ -1.05
CLIP2-204ENST00000474962 TMEM183BQ1AE95 376 aa8.49□□□□□ -1.05
CLIP2-204ENST00000474962 ZFAND2AQ8N6M9 145 aa8.49□□□□□ -1.05
CLIP2-204ENST00000474962 CELA1Q9UNI1 258 aa8.49□□□□□ -1.05
CLIP2-204ENST00000474962 TRAV21A0A0B4J279 112 aa8.48□□□□□ -1.05
CLIP2-204ENST00000474962 TMEM189A5PLL7 270 aa8.48□□□□□ -1.05
CLIP2-204ENST00000474962 ZNF705GA8MUZ8 300 aaPredicted RBP8.48□□□□□ -1.05
CLIP2-204ENST00000474962 IGLV2-11P01706 119 aa8.48□□□□□ -1.05
CLIP2-204ENST00000474962 EMP1P54849 157 aa8.48□□□□□ -1.05
CLIP2-204ENST00000474962 C12orf74Q32Q52 190 aa8.48□□□□□ -1.05
CLIP2-204ENST00000474962 TOR2AQ5JU69 321 aa8.48□□□□□ -1.05
CLIP2-204ENST00000474962 FAM159AQ6UWV7 190 aa8.48□□□□□ -1.05
CLIP2-204ENST00000474962 Q86TA4 180 aa8.48□□□□□ -1.05
CLIP2-204ENST00000474962 BAGE2Q86Y30 109 aa8.48□□□□□ -1.05
CLIP2-204ENST00000474962 FAM210AQ96ND0 272 aa8.48□□□□□ -1.05
CLIP2-204ENST00000474962 PYGO2Q9BRQ0 406 aa8.48□□□□□ -1.05
CLIP2-204ENST00000474962 KLF12Q9Y4X4 402 aa8.48□□□□□ -1.05
CLIP2-204ENST00000474962 HECTD4Q9Y4D8 3996 aa8.48□□□□□ -1.05
CLIP2-204ENST00000474962 CBY3A6NI87 242 aa8.47□□□□□ -1.05
CLIP2-204ENST00000474962 GCGP01275 180 aa8.47□□□□□ -1.05
CLIP2-204ENST00000474962 CEBPGP53567 150 aa8.47□□□□□ -1.05
CLIP2-204ENST00000474962 TCTAP57738 103 aa8.47□□□□□ -1.05
CLIP2-204ENST00000474962 ZNF506Q5JVG8 444 aa8.47□□□□□ -1.05
CLIP2-204ENST00000474962 EIF4E3Q8N5X7 224 aaKnown RBP8.47□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms