RNA–Protein interactions for RNA: ENST00000474412.1

VPS50-211, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 5

Gene VPS50, Length 819 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-211ENST00000474412 PRR9Q5T870 116 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 Q6ZQT7 251 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 LINC00299Q6ZSB3 139 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 MIR17HGQ75NE6 70 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 STX12Q86Y82 276 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 EXOC3-AS1Q8N2X6 119 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 LRRC20Q8TCA0 184 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 RNASE8Q8TDE3 154 aaKnown RBP4.86□□□□□ -1.63
VPS50-211ENST00000474412 NDUFAF3Q9BU61 184 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 DNAH2Q9P225 4427 aa4.86□□□□□ -1.63
VPS50-211ENST00000474412 IGKV2-40A0A087WW87 121 aaPredicted RBP4.85□□□□□ -1.63
VPS50-211ENST00000474412 RTL8CO15255 209 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 GAS8-AS1O95177 125 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 IGKV2D-40P01614 121 aaPredicted RBP4.85□□□□□ -1.63
VPS50-211ENST00000474412 CT45A10P0DMU9 189 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 DEFB130BP0DP73 79 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 DEFB130AP0DP74 79 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 HTN1P15515 57 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 CDKN1BP46527 198 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 BTN1A1Q13410 526 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 PQLC2Q6ZP29 291 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 BLNKQ8WV28 456 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 PPP1R1CQ8WVI7 109 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 PHYHIPLQ96FC7 376 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 FAM167A-AS1Q96KT0 104 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 SMIM3Q9BZL3 60 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 MBD2Q9UBB5 411 aa4.85□□□□□ -1.63
VPS50-211ENST00000474412 TRBV19A0A075B6N1 114 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 TRAV12-3A0A0B4J271 114 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 A0A1B0GVY2 172 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 VCYO14598 125 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 OR10J4P0C629 311 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 S100A7P31151 101 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 S100A11P31949 105 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 HBG1P69891 147 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 HBG2P69892 147 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 OXA1LQ15070 435 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 Q6ZRG5 221 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 UBE2DNLQ8IWF7 75 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 POM121L12Q8N7R1 296 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 OR1L4Q8NGR5 311 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 Q8TAT8 98 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 LINC01587Q99440 93 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 PFDN5Q99471 154 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 MARVELD1Q9BSK0 173 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 NMES1Q9C002 83 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 WDR61Q9GZS3 305 aaKnown RBP4.84□□□□□ -1.63
VPS50-211ENST00000474412 DNAJC4Q9NNZ3 241 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 HSPB11Q9Y547 144 aa4.84□□□□□ -1.63
VPS50-211ENST00000474412 DNAH17Q9UFH2 4485 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 TEX48A0A1B0GUV7 120 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 LYRM9A8MSI8 78 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 E5RGE8 158 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 F5H768 121 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 PRAF2O60831 178 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 MPC2O95563 127 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 P0DMU3 169 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 FAM231AP0DMU4 169 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 FAM231CP0DMU5 169 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 TSPOP30536 169 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 TAS2R60P59551 318 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 CD300CQ08708 224 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 OR10J6PQ8NGY7 276 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 TMEM263Q8WUH6 116 aaKnown RBP4.83□□□□□ -1.64
VPS50-211ENST00000474412 FXYD5Q96DB9 178 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 C16orf74Q96GX8 76 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 WFDC1Q9HC57 220 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 NOP10Q9NPE3 64 aaKnown RBP4.83□□□□□ -1.64
VPS50-211ENST00000474412 TMEM14CQ9P0S9 112 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 ALG5Q9Y673 324 aa4.83□□□□□ -1.64
VPS50-211ENST00000474412 SSNA1O43805 119 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 ZNF253O75346 499 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 HIST1H1EP10412 219 aaKnown RBP4.82□□□□□ -1.64
VPS50-211ENST00000474412 RAB31Q13636 194 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 ATP6V1FQ16864 119 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 Q6ZR54 194 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 Q6ZTI0 123 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 TMEM256Q8N2U0 113 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 ZFAND2AQ8N6M9 145 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 LINC00612Q8N6U2 182 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 C11orf72Q8NBR9 251 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 FAM19A4Q96LR4 140 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 ATP5SQ99766 215 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 VGLL1Q99990 258 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 AGPAT4-IT1Q9H0P7 198 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 TP53TG3Q9ULZ0 132 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 PKD1P98161 4303 aa4.82□□□□□ -1.64
VPS50-211ENST00000474412 KIAA1109Q2LD37 5005 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 A0A0J9YY99 117 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 C7orf71A4D174 169 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 KLLNB2CW77 178 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 H7BYZ3 331 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 HMGB3O15347 200 aaKnown RBP4.81□□□□□ -1.64
VPS50-211ENST00000474412 OR7C2O60412 319 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 MPDU1O75352 247 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 RAB2AP61019 212 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 UBE2L3P68036 154 aaKnown RBP4.81□□□□□ -1.64
VPS50-211ENST00000474412 GUK1Q16774 197 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 FFAR4Q5NUL3 377 aa4.81□□□□□ -1.64
VPS50-211ENST00000474412 S100A7AQ86SG5 101 aa4.81□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms