RNA–Protein interactions for RNA: ENST00000474254.5

CPA4-205, Transcript of carboxypeptidase A4, humanhuman

TSL 1 (best)

Gene CPA4, Length 1,026 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPA4-205ENST00000474254 RXFP4Q8TDU9 374 aa11.36□□□□□ -0.59
CPA4-205ENST00000474254 PSMG3Q9BT73 122 aaPredicted RBP11.36□□□□□ -0.59
CPA4-205ENST00000474254 TMPRSS5Q9H3S3 457 aa11.36□□□□□ -0.59
CPA4-205ENST00000474254 OTORQ9NRC9 128 aa11.36□□□□□ -0.59
CPA4-205ENST00000474254 IGHV1OR15-1A0A075B7D0 117 aa11.35□□□□□ -0.59
CPA4-205ENST00000474254 RGS13O14921 159 aa11.35□□□□□ -0.59
CPA4-205ENST00000474254 HOXA5P20719 270 aa11.35□□□□□ -0.59
CPA4-205ENST00000474254 Q5BKY6 102 aa11.35□□□□□ -0.59
CPA4-205ENST00000474254 Q6ZQT7 251 aa11.35□□□□□ -0.59
CPA4-205ENST00000474254 C18orf15Q96N68 181 aa11.35□□□□□ -0.59
CPA4-205ENST00000474254 LENEPQ9Y5L5 61 aa11.35□□□□□ -0.59
CPA4-205ENST00000474254 HSPG2P98160 4391 aa11.35□□□□□ -0.59
CPA4-205ENST00000474254 TRAV26-1A0A087WT03 109 aa11.34□□□□□ -0.59
CPA4-205ENST00000474254 ARL14EPLP0DKL9 152 aa11.34□□□□□ -0.59
CPA4-205ENST00000474254 CDC34P49427 236 aaPredicted RBP11.34□□□□□ -0.59
CPA4-205ENST00000474254 OR5I1Q13606 314 aa11.34□□□□□ -0.59
CPA4-205ENST00000474254 TMED6Q8WW62 240 aa11.34□□□□□ -0.59
CPA4-205ENST00000474254 GNPNAT1Q96EK6 184 aaPredicted RBP11.34□□□□□ -0.59
CPA4-205ENST00000474254 RNF222A6NCQ9 220 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 PGPA6NDG6 321 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 C16orf90A8MZG2 172 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 HMGB3O15347 200 aaKnown RBP11.33□□□□□ -0.6
CPA4-205ENST00000474254 STAG3L2P0CL84 134 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 STAG3L3P0CL85 134 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 ATP6V0CP27449 155 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 FAM74A1Q5RGS3 127 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 Q6AWC8 147 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 ARL6IP6Q8N6S5 226 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 CMTM2Q8TAZ6 248 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 HYLS1Q96M11 299 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 ARPC5LQ9BPX5 153 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 TP53TG3Q9ULZ0 132 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 KLF12Q9Y4X4 402 aa11.33□□□□□ -0.6
CPA4-205ENST00000474254 TRGV2A0A075B6R0 118 aa11.32□□□□□ -0.6
CPA4-205ENST00000474254 TRGV1A0A0A0MS02 117 aa11.32□□□□□ -0.6
CPA4-205ENST00000474254 NBDYA0A0U1RRE5 68 aa11.32□□□□□ -0.6
CPA4-205ENST00000474254 H3BNG1 76 aa11.32□□□□□ -0.6
CPA4-205ENST00000474254 SPINK4O60575 86 aa11.32□□□□□ -0.6
CPA4-205ENST00000474254 CCL18P55774 89 aa11.32□□□□□ -0.6
CPA4-205ENST00000474254 SERF2P84101 59 aa11.32□□□□□ -0.6
CPA4-205ENST00000474254 RGS21Q2M5E4 152 aa11.32□□□□□ -0.6
CPA4-205ENST00000474254 C6orf223Q8N319 242 aa11.32□□□□□ -0.6
CPA4-205ENST00000474254 INO80EQ8NBZ0 244 aaPredicted RBP11.32□□□□□ -0.6
CPA4-205ENST00000474254 ZNRF2Q8NHG8 242 aa11.32□□□□□ -0.6
CPA4-205ENST00000474254 RPH3ALQ9UNE2 315 aa11.32□□□□□ -0.6
CPA4-205ENST00000474254 LINC00588Q9Y4M8 146 aa11.32□□□□□ -0.6
CPA4-205ENST00000474254 FXYD6-FXYD2A0A087WZ82 144 aa11.31□□□□□ -0.6
CPA4-205ENST00000474254 A0A0J9YY99 117 aa11.31□□□□□ -0.6
CPA4-205ENST00000474254 MBP02144 154 aa11.31□□□□□ -0.6
CPA4-205ENST00000474254 TNP2Q05952 138 aa11.31□□□□□ -0.6
CPA4-205ENST00000474254 ZNF415Q09FC8 603 aa11.31□□□□□ -0.6
CPA4-205ENST00000474254 GOLT1AQ6ZVE7 132 aa11.31□□□□□ -0.6
CPA4-205ENST00000474254 RAB24Q969Q5 203 aa11.31□□□□□ -0.6
CPA4-205ENST00000474254 SH3BGRL3Q9H299 93 aa11.31□□□□□ -0.6
CPA4-205ENST00000474254 TNFSF18Q9UNG2 199 aa11.31□□□□□ -0.6
CPA4-205ENST00000474254 LRP1BQ9NZR2 4599 aa11.31□□□□□ -0.6
CPA4-205ENST00000474254 G3V3Q6 166 aa11.3□□□□□ -0.6
CPA4-205ENST00000474254 MUC21Q5SSG8 566 aa11.3□□□□□ -0.6
CPA4-205ENST00000474254 OR2T35Q8NGX2 323 aa11.3□□□□□ -0.6
CPA4-205ENST00000474254 SUN5Q8TC36 379 aa11.3□□□□□ -0.6
CPA4-205ENST00000474254 GCHFRP30047 84 aa11.29□□□□□ -0.6
CPA4-205ENST00000474254 GNG5P63218 68 aa11.29□□□□□ -0.6
CPA4-205ENST00000474254 RPL7L1Q6DKI1 246 aaKnown RBP11.29□□□□□ -0.6
CPA4-205ENST00000474254 SSX7Q7RTT5 188 aa11.29□□□□□ -0.6
CPA4-205ENST00000474254 ST6GAL2Q96JF0 529 aa11.29□□□□□ -0.6
CPA4-205ENST00000474254 MRPL16Q9NX20 251 aaKnown RBP11.29□□□□□ -0.6
CPA4-205ENST00000474254 TRAV8-1A0A0A6YYK1 113 aa11.28□□□□□ -0.6
CPA4-205ENST00000474254 BORCS7-ASMTA0A0B4J1R7 106 aa11.28□□□□□ -0.6
CPA4-205ENST00000474254 TDRG1Q3Y452 100 aa11.28□□□□□ -0.6
CPA4-205ENST00000474254 C5orf17Q8NAS9 161 aa11.28□□□□□ -0.6
CPA4-205ENST00000474254 VSIG2Q96IQ7 327 aa11.28□□□□□ -0.6
CPA4-205ENST00000474254 KRTAP4-5Q9BYR2 181 aa11.28□□□□□ -0.6
CPA4-205ENST00000474254 TRGV11A0A075B6L2 103 aa11.27□□□□□ -0.61
CPA4-205ENST00000474254 SERTM2A0A1B0GWG4 89 aa11.27□□□□□ -0.61
CPA4-205ENST00000474254 CDK2AP2O75956 126 aa11.27□□□□□ -0.61
CPA4-205ENST00000474254 TMEM183BQ1AE95 376 aa11.27□□□□□ -0.61
CPA4-205ENST00000474254 FAM159AQ6UWV7 190 aa11.27□□□□□ -0.61
CPA4-205ENST00000474254 TMEM183AQ8IXX5 376 aa11.27□□□□□ -0.61
CPA4-205ENST00000474254 MAPKAPK5-AS1Q8N8E1 139 aa11.27□□□□□ -0.61
CPA4-205ENST00000474254 TVP23CQ96ET8 276 aa11.27□□□□□ -0.61
CPA4-205ENST00000474254 ACTR3CQ9C0K3 210 aaPredicted RBP11.27□□□□□ -0.61
CPA4-205ENST00000474254 MDFICQ9P1T7 246 aa11.27□□□□□ -0.61
CPA4-205ENST00000474254 A0A096LPF7 62 aa11.26□□□□□ -0.61
CPA4-205ENST00000474254 F6UZH7 168 aa11.26□□□□□ -0.61
CPA4-205ENST00000474254 CXorf1O96002 111 aa11.26□□□□□ -0.61
CPA4-205ENST00000474254 UPK3BQ9BT76 320 aa11.26□□□□□ -0.61
CPA4-205ENST00000474254 TREM1Q9NP99 234 aa11.26□□□□□ -0.61
CPA4-205ENST00000474254 TMEM167BQ9NRX6 74 aa11.26□□□□□ -0.61
CPA4-205ENST00000474254 TRAV21A0A0B4J279 112 aa11.25□□□□□ -0.61
CPA4-205ENST00000474254 GGTLC3B5MD39 225 aa11.25□□□□□ -0.61
CPA4-205ENST00000474254 TCRAP04437 139 aa11.25□□□□□ -0.61
CPA4-205ENST00000474254 SPXQ9BT56 116 aa11.25□□□□□ -0.61
CPA4-205ENST00000474254 NAGKQ9UJ70 344 aa11.25□□□□□ -0.61
CPA4-205ENST00000474254 MRPS16Q9Y3D3 137 aaKnown RBP11.25□□□□□ -0.61
CPA4-205ENST00000474254 APOBP04114 4563 aaKnown RBP11.25□□□□□ -0.61
CPA4-205ENST00000474254 IGHV3-53P01767 116 aa11.24□□□□□ -0.61
CPA4-205ENST00000474254 ZNF726P1Q15940 193 aa11.24□□□□□ -0.61
CPA4-205ENST00000474254 ESRGQ1W209 222 aa11.24□□□□□ -0.61
CPA4-205ENST00000474254 TTC32Q5I0X7 151 aa11.24□□□□□ -0.61
CPA4-205ENST00000474254 NDFIP1Q9BT67 221 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms