RNA–Protein interactions for RNA: ENST00000473460.1

GINS1-202, Transcript of GINS complex subunit 1, humanhuman

TSL 2

Gene GINS1, Length 541 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GINS1-202ENST00000473460 CEP162Q5TB80 1403 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 FKBP1CQ5VVH2 108 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 TMEM14EPQ6UXP3 125 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 SNX29P2Q8IUI4 249 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 TCTE3Q8IZS6 198 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 OR8I2Q8N0Y5 310 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 TMEM229BQ8NBD8 167 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 OR5D16Q8NGK9 328 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 PATE1Q8WXA2 126 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 MUCL1Q96DR8 90 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 PPP3R2Q96LZ3 170 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 ZNF714Q96N38 554 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 GPX7Q96SL4 187 aaPredicted RBP0.68□□□□□ -2.3
GINS1-202ENST00000473460 SMIM3Q9BZL3 60 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 OR2H1Q9GZK4 316 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 CACYBPQ9HB71 228 aaKnown RBP0.68□□□□□ -2.3
GINS1-202ENST00000473460 NIT2Q9NQR4 276 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 BAZ1AQ9NRL2 1556 aaPredicted RBP0.68□□□□□ -2.3
GINS1-202ENST00000473460 FAIMQ9NVQ4 179 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 NAT8BQ9UHF3 227 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 PCTPQ9UKL6 214 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 TRAPPC2LQ9UL33 140 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 NWD2Q9ULI1 1742 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 TNFSF18Q9UNG2 199 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 LAMC3Q9Y6N6 1575 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 MCM3APO60318 1980 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 ZFHX3Q15911 3703 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 DOCK2Q92608 1830 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 FLG2Q5D862 2391 aaPredicted RBP0.68□□□□□ -2.3
GINS1-202ENST00000473460 PTPRDP23468 1912 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 HELZP42694 1942 aaKnown RBP0.68□□□□□ -2.3
GINS1-202ENST00000473460 LAMB1P07942 1786 aa0.68□□□□□ -2.3
GINS1-202ENST00000473460 HELZ2Q9BYK8 2649 aaKnown RBP0.68□□□□□ -2.3
GINS1-202ENST00000473460 IQGAP3Q86VI3 1631 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 CCDC88BA6NC98 1476 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 COL1A1P02452 1464 aaPredicted RBP0.67□□□□□ -2.3
GINS1-202ENST00000473460 CCDC141Q6ZP82 1450 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 MAGI2Q86UL8 1455 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 IFT140Q96RY7 1462 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 CEP164Q9UPV0 1460 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 CCDC88CQ9P219 2028 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 DSPPQ9NZW4 1301 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 PLXNA4Q9HCM2 1894 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 MYO5AQ9Y4I1 1855 aaKnown RBP0.67□□□□□ -2.3
GINS1-202ENST00000473460 INO80Q9ULG1 1556 aaPredicted RBP0.67□□□□□ -2.3
GINS1-202ENST00000473460 CPSF1Q10570 1443 aaKnown RBP0.67□□□□□ -2.3
GINS1-202ENST00000473460 BTAF1O14981 1849 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 PATJQ8NI35 1801 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 A0A087WSZ3 146 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 TRAV27A0A087WT01 109 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 TRAV10A0A0B4J240 114 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 IGHV1-58A0A0C4DH39 117 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 TRBV7-6A0A0J9YX20 115 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 TRBV6-4A0A1B0GX49 114 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 C20orf202A1L168 122 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 TLCD2A6NGC4 264 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 ZNF670-ZNF695F2Z2N8 137 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 TMEM256-PLSCR3K7ERE1 68 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 CORTO00230 105 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 CCL25O15444 150 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 LYRM1O43325 122 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 DPM2O94777 84 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 NCR2O95944 276 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 IFNA17P01571 189 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 TRGC2P03986 189 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 APODP05090 189 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 CMPK1P30085 196 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 INSL3P51460 131 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 AKR1D1P51857 326 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 NDUFA6P56556 154 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 ROMO1P60602 79 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 PKIAP61925 76 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 PPP3R1P63098 170 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 SELENOWP63302 87 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 EIF3IQ13347 325 aaKnown RBP0.67□□□□□ -2.3
GINS1-202ENST00000473460 DIAPH2-AS1Q14236 149 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 VMA21Q3ZAQ7 101 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 GLIPR1L1Q6UWM5 242 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 LINC00322Q6ZN03 302 aaPredicted RBP0.67□□□□□ -2.3
GINS1-202ENST00000473460 Q8IYB0 196 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 C9orf62Q8N4C0 152 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 OR10AG1Q8NH19 301 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 ISOC1Q96CN7 298 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 BORCS8Q96FH0 119 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 ZC2HC1AQ96GY0 325 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 OBSCN-AS1Q96MR7 158 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 LXNQ9BS40 222 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 PSMG3Q9BT73 122 aaPredicted RBP0.67□□□□□ -2.3
GINS1-202ENST00000473460 PDCD10Q9BUL8 212 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 TAF9BQ9HBM6 251 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 OTORQ9NRC9 128 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 MED11Q9P086 117 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 GNG8Q9UK08 70 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 BOKQ9UMX3 212 aaPredicted RBP0.67□□□□□ -2.3
GINS1-202ENST00000473460 C22orf24Q9Y442 160 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 CHCHD2Q9Y6H1 151 aaPredicted RBP0.67□□□□□ -2.3
GINS1-202ENST00000473460 BRWD1Q9NSI6 2320 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 PTPRFP10586 1907 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 DLC1Q96QB1 1528 aa0.67□□□□□ -2.3
GINS1-202ENST00000473460 MUC22E2RYF6 1773 aaPredicted RBP0.67□□□□□ -2.3
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms