RNA–Protein interactions for RNA: ENST00000473062.1

CLCC1-208, Transcript of chloride channel CLIC like 1, humanhuman

TSL 3

Gene CLCC1, Length 319 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCC1-208ENST00000473062 PCBD2Q9H0N5 130 aa0.25□□□□□ -2.37
CLCC1-208ENST00000473062 MRPL36Q9P0J6 103 aaKnown RBP0.25□□□□□ -2.37
CLCC1-208ENST00000473062 TNCP24821 2201 aa0.25□□□□□ -2.37
CLCC1-208ENST00000473062 ADGBQ8N7X0 1667 aa0.24□□□□□ -2.37
CLCC1-208ENST00000473062 MAST4O15021 2626 aa0.24□□□□□ -2.37
CLCC1-208ENST00000473062 SPAG17Q6Q759 2223 aa0.24□□□□□ -2.37
CLCC1-208ENST00000473062 LOC107984156A0A0G2JMH3 177 aa0.24□□□□□ -2.37
CLCC1-208ENST00000473062 MCRIP1C9JLW8 97 aa0.24□□□□□ -2.37
CLCC1-208ENST00000473062 RPL37P61927 97 aaKnown RBP0.24□□□□□ -2.37
CLCC1-208ENST00000473062 RHOHQ15669 191 aa0.24□□□□□ -2.37
CLCC1-208ENST00000473062 Q5XG85 94 aa0.24□□□□□ -2.37
CLCC1-208ENST00000473062 IDO2Q6ZQW0 420 aa0.24□□□□□ -2.37
CLCC1-208ENST00000473062 ARL17AQ8IVW1 177 aa0.24□□□□□ -2.37
CLCC1-208ENST00000473062 MORN4Q8NDC4 146 aa0.24□□□□□ -2.37
CLCC1-208ENST00000473062 DMAC1Q96GE9 116 aa0.24□□□□□ -2.37
CLCC1-208ENST00000473062 HOPXQ9BPY8 73 aaPredicted RBP0.24□□□□□ -2.37
CLCC1-208ENST00000473062 CENPHQ9H3R5 247 aa0.24□□□□□ -2.37
CLCC1-208ENST00000473062 SYNMO15061 1565 aa0.23□□□□□ -2.37
CLCC1-208ENST00000473062 PNMA8CA0A1B0GUJ8 204 aa0.23□□□□□ -2.37
CLCC1-208ENST00000473062 TPST1O60507 370 aa0.23□□□□□ -2.37
CLCC1-208ENST00000473062 IFNA21P01568 189 aa0.23□□□□□ -2.37
CLCC1-208ENST00000473062 OR9Q1Q8NGQ5 310 aa0.23□□□□□ -2.37
CLCC1-208ENST00000473062 NABP2Q9BQ15 211 aa0.23□□□□□ -2.37
CLCC1-208ENST00000473062 VPS25Q9BRG1 176 aa0.23□□□□□ -2.37
CLCC1-208ENST00000473062 ZCCHC11Q5TAX3 1644 aaKnown RBP0.23□□□□□ -2.37
CLCC1-208ENST00000473062 DLC1Q96QB1 1528 aa0.23□□□□□ -2.37
CLCC1-208ENST00000473062 PTPRDP23468 1912 aa0.23□□□□□ -2.37
CLCC1-208ENST00000473062 PTPRZ1P23471 2315 aaPredicted RBP0.22□□□□□ -2.37
CLCC1-208ENST00000473062 NUP210LQ5VU65 1888 aa0.22□□□□□ -2.37
CLCC1-208ENST00000473062 A0A0G2JMM0 328 aa0.22□□□□□ -2.37
CLCC1-208ENST00000473062 A0A1B0GV72 72 aa0.22□□□□□ -2.37
CLCC1-208ENST00000473062 EDF1O60869 148 aaKnown RBP0.22□□□□□ -2.37
CLCC1-208ENST00000473062 KRTAP2-3P0C7H8 128 aa0.22□□□□□ -2.37
CLCC1-208ENST00000473062 FXYD3Q14802 87 aa0.22□□□□□ -2.37
CLCC1-208ENST00000473062 CSAG1Q6PB30 78 aa0.22□□□□□ -2.37
CLCC1-208ENST00000473062 THEM6Q8WUY1 208 aa0.22□□□□□ -2.37
CLCC1-208ENST00000473062 KRTAP2-4Q9BYR9 128 aa0.22□□□□□ -2.37
CLCC1-208ENST00000473062 KRTAP2-1Q9BYU5 128 aa0.22□□□□□ -2.37
CLCC1-208ENST00000473062 ATG5Q9H1Y0 275 aa0.22□□□□□ -2.37
CLCC1-208ENST00000473062 MED31Q9Y3C7 131 aa0.22□□□□□ -2.37
CLCC1-208ENST00000473062 TPRP12270 2363 aaKnown RBP0.21□□□□□ -2.38
CLCC1-208ENST00000473062 FGD6Q6ZV73 1430 aa0.21□□□□□ -2.38
CLCC1-208ENST00000473062 A0A1W2PRE2 83 aa0.21□□□□□ -2.38
CLCC1-208ENST00000473062 H7BYZ3 331 aa0.21□□□□□ -2.38
CLCC1-208ENST00000473062 APOC1P02654 83 aa0.21□□□□□ -2.38
CLCC1-208ENST00000473062 CKS2P33552 79 aa0.21□□□□□ -2.38
CLCC1-208ENST00000473062 BLCAPP62952 87 aa0.21□□□□□ -2.38
CLCC1-208ENST00000473062 KLKP1Q107X0 134 aa0.21□□□□□ -2.38
CLCC1-208ENST00000473062 TOMM20LQ6UXN7 152 aa0.21□□□□□ -2.38
CLCC1-208ENST00000473062 OR5A2Q8NGI9 324 aa0.21□□□□□ -2.38
CLCC1-208ENST00000473062 LINC00208Q96KT6 92 aa0.21□□□□□ -2.38
CLCC1-208ENST00000473062 TAF9BQ9HBM6 251 aa0.21□□□□□ -2.38
CLCC1-208ENST00000473062 FXYD1O00168 92 aa0.2□□□□□ -2.38
CLCC1-208ENST00000473062 LY6G6CO95867 125 aa0.2□□□□□ -2.38
CLCC1-208ENST00000473062 CD3DP04234 171 aa0.2□□□□□ -2.38
CLCC1-208ENST00000473062 SLC25A4P12235 298 aa0.2□□□□□ -2.38
CLCC1-208ENST00000473062 CRYGSP22914 178 aa0.2□□□□□ -2.38
CLCC1-208ENST00000473062 ZNF56Q15929 161 aa0.2□□□□□ -2.38
CLCC1-208ENST00000473062 UNQ5815/PRO19632Q6UWF5 114 aa0.2□□□□□ -2.38
CLCC1-208ENST00000473062 LYPD5Q6UWN5 251 aa0.2□□□□□ -2.38
CLCC1-208ENST00000473062 C5orf56Q8N8D9 126 aa0.2□□□□□ -2.38
CLCC1-208ENST00000473062 OR51A4Q8NGJ6 313 aa0.2□□□□□ -2.38
CLCC1-208ENST00000473062 TMEM14BQ9NUH8 114 aa0.2□□□□□ -2.38
CLCC1-208ENST00000473062 FKBP11Q9NYL4 201 aa0.2□□□□□ -2.38
CLCC1-208ENST00000473062 A2MP01023 1474 aa0.2□□□□□ -2.38
CLCC1-208ENST00000473062 TCOF1Q13428 1488 aaKnown RBP0.2□□□□□ -2.38
CLCC1-208ENST00000473062 N4BP2Q86UW6 1770 aaPredicted RBP0.19□□□□□ -2.38
CLCC1-208ENST00000473062 UQCRQO14949 82 aa0.19□□□□□ -2.38
CLCC1-208ENST00000473062 HBDP02042 147 aa0.19□□□□□ -2.38
CLCC1-208ENST00000473062 RPL22P35268 128 aaKnown RBP0.19□□□□□ -2.38
CLCC1-208ENST00000473062 GNG10P50151 68 aa0.19□□□□□ -2.38
CLCC1-208ENST00000473062 TFAMQ00059 246 aaKnown RBP0.19□□□□□ -2.38
CLCC1-208ENST00000473062 TEX29Q8N6K0 151 aa0.19□□□□□ -2.38
CLCC1-208ENST00000473062 COA4Q9NYJ1 87 aa0.19□□□□□ -2.38
CLCC1-208ENST00000473062 MYH2Q9UKX2 1941 aa0.19□□□□□ -2.38
CLCC1-208ENST00000473062 ZFYVE26Q68DK2 2539 aa0.18□□□□□ -2.38
CLCC1-208ENST00000473062 IGHV1-24A0A0C4DH33 117 aa0.18□□□□□ -2.38
CLCC1-208ENST00000473062 LOC101927531A0A1B0GV80 90 aa0.18□□□□□ -2.38
CLCC1-208ENST00000473062 NEFHP12036 1026 aa0.18□□□□□ -2.38
CLCC1-208ENST00000473062 POLR2HP52434 150 aaKnown RBP0.18□□□□□ -2.38
CLCC1-208ENST00000473062 NAT14Q8WUY8 206 aa0.18□□□□□ -2.38
CLCC1-208ENST00000473062 SKA2Q8WVK7 121 aaPredicted RBP0.18□□□□□ -2.38
CLCC1-208ENST00000473062 SPANXCQ9NY87 97 aa0.18□□□□□ -2.38
CLCC1-208ENST00000473062 NINQ8N4C6 2090 aa0.18□□□□□ -2.38
CLCC1-208ENST00000473062 IGSF10Q6WRI0 2623 aa0.17□□□□□ -2.38
CLCC1-208ENST00000473062 FAT4Q6V0I7 4981 aa0.17□□□□□ -2.38
CLCC1-208ENST00000473062 NBDYA0A0U1RRE5 68 aa0.17□□□□□ -2.38
CLCC1-208ENST00000473062 TEX49A0A1B0GTD5 131 aa0.17□□□□□ -2.38
CLCC1-208ENST00000473062 HIST1H1BP16401 226 aaKnown RBP0.17□□□□□ -2.38
CLCC1-208ENST00000473062 G0S2P27469 103 aa0.17□□□□□ -2.38
CLCC1-208ENST00000473062 POLR2JP52435 117 aaKnown RBP0.17□□□□□ -2.38
CLCC1-208ENST00000473062 PSPHP78330 225 aa0.17□□□□□ -2.38
CLCC1-208ENST00000473062 TMEM35BQ8NCS4 154 aa0.17□□□□□ -2.38
CLCC1-208ENST00000473062 CBLN4Q9NTU7 201 aa0.17□□□□□ -2.38
CLCC1-208ENST00000473062 COMMD3Q9UBI1 195 aa0.17□□□□□ -2.38
CLCC1-208ENST00000473062 SYNE1Q8NF91 8797 aaKnown RBP0.17□□□□□ -2.38
CLCC1-208ENST00000473062 MEGF8Q7Z7M0 2845 aa0.16□□□□□ -2.38
CLCC1-208ENST00000473062 TRAV2A0A0B4J234 112 aa0.16□□□□□ -2.38
CLCC1-208ENST00000473062 LOC107984640A0A0U1RRK4 108 aa0.16□□□□□ -2.38
CLCC1-208ENST00000473062 SPINK1P00995 79 aa0.16□□□□□ -2.38
Retrieved 100 of 20,778 RNA–protein pairs in 127.9 ms