RNA–Protein interactions for RNA: ENST00000472892.1

VTI1A-203, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 1 (best)

Gene VTI1A, Length 1,247 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-203ENST00000472892 TTC32Q5I0X7 151 aa10.56□□□□□ -0.72
VTI1A-203ENST00000472892 LYPD1Q8N2G4 141 aa10.56□□□□□ -0.72
VTI1A-203ENST00000472892 PHYHIPLQ96FC7 376 aa10.56□□□□□ -0.72
VTI1A-203ENST00000472892 KRTAP1-5Q9BYS1 174 aa10.56□□□□□ -0.72
VTI1A-203ENST00000472892 Q9H3A6 140 aa10.56□□□□□ -0.72
VTI1A-203ENST00000472892 PTTG2Q9NZH5 202 aa10.56□□□□□ -0.72
VTI1A-203ENST00000472892 A0A1W2PPQ1 181 aa10.55□□□□□ -0.72
VTI1A-203ENST00000472892 RBAKDNA6NC62 111 aa10.55□□□□□ -0.72
VTI1A-203ENST00000472892 RGS13O14921 159 aa10.55□□□□□ -0.72
VTI1A-203ENST00000472892 RANP62826 216 aaKnown RBP10.55□□□□□ -0.72
VTI1A-203ENST00000472892 HSPB11Q9Y547 144 aa10.55□□□□□ -0.72
VTI1A-203ENST00000472892 C16orf90A8MZG2 172 aa10.54□□□□□ -0.72
VTI1A-203ENST00000472892 OR7C2O60412 319 aa10.54□□□□□ -0.72
VTI1A-203ENST00000472892 BTF3P20290 206 aaKnown RBP10.54□□□□□ -0.72
VTI1A-203ENST00000472892 CSN1S1P47710 185 aa10.54□□□□□ -0.72
VTI1A-203ENST00000472892 FFAR4Q5NUL3 377 aa10.54□□□□□ -0.72
VTI1A-203ENST00000472892 Q8TAT8 98 aa10.54□□□□□ -0.72
VTI1A-203ENST00000472892 ST6GAL2Q96JF0 529 aa10.54□□□□□ -0.72
VTI1A-203ENST00000472892 SSNA1O43805 119 aa10.53□□□□□ -0.72
VTI1A-203ENST00000472892 IFNA5P01569 189 aa10.53□□□□□ -0.72
VTI1A-203ENST00000472892 PET100P0DJ07 73 aa10.53□□□□□ -0.72
VTI1A-203ENST00000472892 RPL12P30050 165 aaKnown RBP10.53□□□□□ -0.72
VTI1A-203ENST00000472892 ZNF266Q14584 549 aa10.53□□□□□ -0.72
VTI1A-203ENST00000472892 SCGB1C1Q8TD33 95 aa10.53□□□□□ -0.72
VTI1A-203ENST00000472892 ABCA13Q86UQ4 5058 aa10.53□□□□□ -0.72
VTI1A-203ENST00000472892 MUC4Q99102 2169 aa10.53□□□□□ -0.72
VTI1A-203ENST00000472892 LRP1BQ9NZR2 4599 aa10.53□□□□□ -0.72
VTI1A-203ENST00000472892 DIRC3C9JPN6 131 aa10.52□□□□□ -0.73
VTI1A-203ENST00000472892 DEFA1P59665 94 aa10.52□□□□□ -0.73
VTI1A-203ENST00000472892 DEFA3P59666 94 aa10.52□□□□□ -0.73
VTI1A-203ENST00000472892 UBE2L3P68036 154 aaKnown RBP10.52□□□□□ -0.73
VTI1A-203ENST00000472892 KHDC3LQ587J8 217 aa10.52□□□□□ -0.73
VTI1A-203ENST00000472892 ARPC5LQ9BPX5 153 aa10.52□□□□□ -0.73
VTI1A-203ENST00000472892 SMIM3Q9BZL3 60 aa10.52□□□□□ -0.73
VTI1A-203ENST00000472892 PAX4O43316 350 aa10.51□□□□□ -0.73
VTI1A-203ENST00000472892 TAS2R45P59539 299 aa10.51□□□□□ -0.73
VTI1A-203ENST00000472892 SLAQ13239 276 aa10.51□□□□□ -0.73
VTI1A-203ENST00000472892 FHL2Q14192 279 aa10.51□□□□□ -0.73
VTI1A-203ENST00000472892 Q6AWC8 147 aa10.51□□□□□ -0.73
VTI1A-203ENST00000472892 WFDC1Q9HC57 220 aa10.51□□□□□ -0.73
VTI1A-203ENST00000472892 MRPL16Q9NX20 251 aaKnown RBP10.51□□□□□ -0.73
VTI1A-203ENST00000472892 PRO0255Q9UI72 69 aa10.51□□□□□ -0.73
VTI1A-203ENST00000472892 LENEPQ9Y5L5 61 aa10.51□□□□□ -0.73
VTI1A-203ENST00000472892 HSPG2P98160 4391 aa10.5□□□□□ -0.73
VTI1A-203ENST00000472892 CDK2AP2O75956 126 aa10.5□□□□□ -0.73
VTI1A-203ENST00000472892 IGHV3-53P01767 116 aa10.5□□□□□ -0.73
VTI1A-203ENST00000472892 CRYBA4P53673 196 aa10.5□□□□□ -0.73
VTI1A-203ENST00000472892 ZNF415Q09FC8 603 aa10.5□□□□□ -0.73
VTI1A-203ENST00000472892 TMED6Q8WW62 240 aa10.5□□□□□ -0.73
VTI1A-203ENST00000472892 MDFICQ9P1T7 246 aa10.5□□□□□ -0.73
VTI1A-203ENST00000472892 MBD2Q9UBB5 411 aa10.5□□□□□ -0.73
VTI1A-203ENST00000472892 HHLA3Q9XRX5 114 aa10.5□□□□□ -0.73
VTI1A-203ENST00000472892 MUC21Q5SSG8 566 aa10.49□□□□□ -0.73
VTI1A-203ENST00000472892 RASL10AQ92737 203 aa10.49□□□□□ -0.73
VTI1A-203ENST00000472892 KRTAP4-5Q9BYR2 181 aa10.49□□□□□ -0.73
VTI1A-203ENST00000472892 OTORQ9NRC9 128 aa10.49□□□□□ -0.73
VTI1A-203ENST00000472892 ICOSQ9Y6W8 199 aa10.49□□□□□ -0.73
VTI1A-203ENST00000472892 PGPA6NDG6 321 aa10.48□□□□□ -0.73
VTI1A-203ENST00000472892 SIVA1O15304 175 aa10.48□□□□□ -0.73
VTI1A-203ENST00000472892 EIF3GO75821 320 aaKnown RBP eCLIP10.48□□□□□ -0.73
VTI1A-203ENST00000472892 ACOT6Q3I5F7 207 aaPredicted RBP10.48□□□□□ -0.73
VTI1A-203ENST00000472892 PQLC2Q6ZP29 291 aa10.48□□□□□ -0.73
VTI1A-203ENST00000472892 SPATA12Q7Z6I5 190 aa10.48□□□□□ -0.73
VTI1A-203ENST00000472892 IQCF2Q8IXL9 164 aa10.48□□□□□ -0.73
VTI1A-203ENST00000472892 ARL6IP6Q8N6S5 226 aa10.48□□□□□ -0.73
VTI1A-203ENST00000472892 HYLS1Q96M11 299 aa10.48□□□□□ -0.73
VTI1A-203ENST00000472892 C8orf49Q96NF6 230 aa10.48□□□□□ -0.73
VTI1A-203ENST00000472892 MRPL23Q16540 153 aaKnown RBP10.47□□□□□ -0.73
VTI1A-203ENST00000472892 TDRG1Q3Y452 100 aa10.47□□□□□ -0.73
VTI1A-203ENST00000472892 FAM74A1Q5RGS3 127 aa10.47□□□□□ -0.73
VTI1A-203ENST00000472892 LYPD5Q6UWN5 251 aa10.47□□□□□ -0.73
VTI1A-203ENST00000472892 FAM159AQ6UWV7 190 aa10.47□□□□□ -0.73
VTI1A-203ENST00000472892 SPXQ9BT56 116 aa10.47□□□□□ -0.73
VTI1A-203ENST00000472892 DNAH5Q8TE73 4624 aa10.46□□□□□ -0.73
VTI1A-203ENST00000472892 TRGV11A0A075B6L2 103 aa10.46□□□□□ -0.73
VTI1A-203ENST00000472892 A0A1W2PPV4 95 aa10.46□□□□□ -0.73
VTI1A-203ENST00000472892 NXPH4O95158 308 aa10.46□□□□□ -0.73
VTI1A-203ENST00000472892 LINC00315P59091 139 aa10.46□□□□□ -0.73
VTI1A-203ENST00000472892 TMEM183BQ1AE95 376 aa10.46□□□□□ -0.73
VTI1A-203ENST00000472892 Q6ZRN7 208 aaPredicted RBP10.46□□□□□ -0.73
VTI1A-203ENST00000472892 TMEM183AQ8IXX5 376 aa10.46□□□□□ -0.73
VTI1A-203ENST00000472892 OR10G4Q8NGN3 311 aa10.46□□□□□ -0.73
VTI1A-203ENST00000472892 CMTM2Q8TAZ6 248 aa10.46□□□□□ -0.73
VTI1A-203ENST00000472892 TRGV4A0A0C4DH28 118 aa10.45□□□□□ -0.74
VTI1A-203ENST00000472892 KRTAP10-2P60368 255 aa10.45□□□□□ -0.74
VTI1A-203ENST00000472892 RAB2AP61019 212 aa10.45□□□□□ -0.74
VTI1A-203ENST00000472892 NEGR1Q7Z3B1 354 aa10.45□□□□□ -0.74
VTI1A-203ENST00000472892 OR10G9Q8NGN4 311 aa10.45□□□□□ -0.74
VTI1A-203ENST00000472892 OR10G7Q8NGN6 311 aa10.45□□□□□ -0.74
VTI1A-203ENST00000472892 ZNF479Q96JC4 524 aa10.45□□□□□ -0.74
VTI1A-203ENST00000472892 GNRH2O43555 120 aa10.44□□□□□ -0.74
VTI1A-203ENST00000472892 SFTA3P0C7M3 94 aa10.44□□□□□ -0.74
VTI1A-203ENST00000472892 GOLT1AQ6ZVE7 132 aa10.44□□□□□ -0.74
VTI1A-203ENST00000472892 TVP23CQ96ET8 276 aa10.44□□□□□ -0.74
VTI1A-203ENST00000472892 ALG5Q9Y673 324 aa10.44□□□□□ -0.74
VTI1A-203ENST00000472892 APOBP04114 4563 aaKnown RBP10.43□□□□□ -0.74
VTI1A-203ENST00000472892 TRAV21A0A0B4J279 112 aa10.43□□□□□ -0.74
VTI1A-203ENST00000472892 IGHV3-16A0A0C4DH30 117 aa10.43□□□□□ -0.74
VTI1A-203ENST00000472892 K7EQD1 137 aa10.43□□□□□ -0.74
VTI1A-203ENST00000472892 NAGKQ9UJ70 344 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 60.3 ms