RNA–Protein interactions for RNA: ENST00000472585.1

VCL-204, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-204ENST00000472585 SCGB1D2O95969 90 aa6.18□□□□□ -1.42
VCL-204ENST00000472585 FAUP35544 74 aaKnown RBP6.18□□□□□ -1.42
VCL-204ENST00000472585 SLAQ13239 276 aa6.18□□□□□ -1.42
VCL-204ENST00000472585 GUK1Q16774 197 aa6.18□□□□□ -1.42
VCL-204ENST00000472585 IAH1Q2TAA2 248 aaPredicted RBP6.18□□□□□ -1.42
VCL-204ENST00000472585 Q6ZSA8 131 aa6.18□□□□□ -1.42
VCL-204ENST00000472585 MRPL53Q96EL3 112 aaKnown RBP6.18□□□□□ -1.42
VCL-204ENST00000472585 GSKIPQ9P0R6 139 aa6.18□□□□□ -1.42
VCL-204ENST00000472585 ZNF492Q9P255 531 aa6.18□□□□□ -1.42
VCL-204ENST00000472585 RNF24Q9Y225 148 aa6.18□□□□□ -1.42
VCL-204ENST00000472585 TRGV4A0A0C4DH28 118 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 FAM24AA6NFZ4 105 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 IBA57-AS1B1ANH7 110 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 CST7O76096 145 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 NDUFB6O95139 128 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 NMBP08949 121 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 SRIP30626 198 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 BTCP35070 178 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 TMBIM6P55061 237 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 ZNF415Q09FC8 603 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 MUC21Q5SSG8 566 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 OR10G4Q8NGN3 311 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 RASL10AQ92737 203 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 FAM167A-AS1Q96KT0 104 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 MRPS26Q9BYN8 205 aaKnown RBP6.17□□□□□ -1.42
VCL-204ENST00000472585 TMEM14CQ9P0S9 112 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 WDR83OSQ9Y284 106 aa6.17□□□□□ -1.42
VCL-204ENST00000472585 RS1O15537 224 aa6.16□□□□□ -1.42
VCL-204ENST00000472585 HIST1H1EP10412 219 aaKnown RBP6.16□□□□□ -1.42
VCL-204ENST00000472585 RPL29P47914 159 aaKnown RBP6.16□□□□□ -1.42
VCL-204ENST00000472585 AP3S2P59780 193 aa6.16□□□□□ -1.42
VCL-204ENST00000472585 BAK1Q16611 211 aa6.16□□□□□ -1.42
VCL-204ENST00000472585 VWC2Q2TAL6 325 aa6.16□□□□□ -1.42
VCL-204ENST00000472585 LINC01620Q4KN68 170 aa6.16□□□□□ -1.42
VCL-204ENST00000472585 FAM122CQ6P4D5 195 aa6.16□□□□□ -1.42
VCL-204ENST00000472585 Q6ZRG5 221 aa6.16□□□□□ -1.42
VCL-204ENST00000472585 Q8TAT8 98 aa6.16□□□□□ -1.42
VCL-204ENST00000472585 BLNKQ8WV28 456 aa6.16□□□□□ -1.42
VCL-204ENST00000472585 SLC25A2Q9BXI2 301 aa6.16□□□□□ -1.42
VCL-204ENST00000472585 SLC39A9Q9NUM3 307 aa6.16□□□□□ -1.42
VCL-204ENST00000472585 IGHV3-38A0A0C4DH36 116 aa6.15□□□□□ -1.42
VCL-204ENST00000472585 CCSO14618 274 aa6.15□□□□□ -1.42
VCL-204ENST00000472585 PCNPQ8WW12 178 aaKnown RBP6.15□□□□□ -1.42
VCL-204ENST00000472585 SDHCQ99643 169 aaPredicted RBP6.15□□□□□ -1.42
VCL-204ENST00000472585 Q9HAA7 133 aa6.15□□□□□ -1.42
VCL-204ENST00000472585 IGHV3-16A0A0C4DH30 117 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 IGSF23A1L1A6 192 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 GNRH2O43555 120 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 ORM1P02763 201 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 ZNF138P52744 262 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 SRSF3P84103 164 aaKnown RBP6.14□□□□□ -1.43
VCL-204ENST00000472585 PDE6HQ13956 83 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 LINC01556Q5JQF7 62 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 SCXQ7RTU7 201 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 OR1L4Q8NGR5 311 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 CHAC2Q8WUX2 184 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 MITD1Q8WV92 249 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 DEDD2Q8WXF8 326 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 ARPC5LQ9BPX5 153 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 BCL7BQ9BQE9 202 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 SRRQ9GZT4 340 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 PRELID1Q9Y255 219 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 TIMM9Q9Y5J7 89 aa6.14□□□□□ -1.43
VCL-204ENST00000472585 LECT2O14960 151 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 IGHV3-30P01768 117 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 IGHV3-33P01772 117 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 NBEAP1P0C6P0 100 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 IGHV3-30-3P0DP02 117 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 IGHV3-30-5P0DP03 117 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 GATA1P15976 413 aaPredicted RBP6.13□□□□□ -1.43
VCL-204ENST00000472585 TIRAPP58753 221 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 IL15RAQ13261 267 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 ZNF266Q14584 549 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 TMEM183BQ1AE95 376 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 TMEM78Q5T7P6 136 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 MIR17HGQ75NE6 70 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 TMEM183AQ8IXX5 376 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 FXYD5Q96DB9 178 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 PFDN5Q99471 154 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 UQCC1Q9NVA1 299 aa6.13□□□□□ -1.43
VCL-204ENST00000472585 LSM5Q9Y4Y9 91 aaKnown RBP6.13□□□□□ -1.43
VCL-204ENST00000472585 TRAV4A0A0B4J268 109 aa6.12□□□□□ -1.43
VCL-204ENST00000472585 UBE2L5PA0A1B0GUS4 154 aa6.12□□□□□ -1.43
VCL-204ENST00000472585 OR10J4P0C629 311 aa6.12□□□□□ -1.43
VCL-204ENST00000472585 BCAP31P51572 246 aa6.12□□□□□ -1.43
VCL-204ENST00000472585 CAV2P51636 162 aa6.12□□□□□ -1.43
VCL-204ENST00000472585 RAB31Q13636 194 aa6.12□□□□□ -1.43
VCL-204ENST00000472585 ACOT6Q3I5F7 207 aaPredicted RBP6.12□□□□□ -1.43
VCL-204ENST00000472585 Q6AWC8 147 aa6.12□□□□□ -1.43
VCL-204ENST00000472585 DPPA3Q6W0C5 159 aa6.12□□□□□ -1.43
VCL-204ENST00000472585 C12orf45Q8N5I9 185 aaPredicted RBP6.12□□□□□ -1.43
VCL-204ENST00000472585 TMEM252Q8N6L7 170 aa6.12□□□□□ -1.43
VCL-204ENST00000472585 PHYHIPLQ96FC7 376 aa6.12□□□□□ -1.43
VCL-204ENST00000472585 TXNDC17Q9BRA2 123 aa6.12□□□□□ -1.43
VCL-204ENST00000472585 SPXQ9BT56 116 aa6.12□□□□□ -1.43
VCL-204ENST00000472585 SLC25A31Q9H0C2 315 aa6.12□□□□□ -1.43
VCL-204ENST00000472585 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.11□□□□□ -1.43
VCL-204ENST00000472585 TRBV7-9A0A0J9YWB2 115 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 C9JCJ5 164 aa6.11□□□□□ -1.43
VCL-204ENST00000472585 L7N2F9 121 aa6.11□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 207.2 ms