RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 LINC00862A6NCI5 91 aa12.33□□□□□ -0.44
CCM2-205ENST00000472223 ZNF727A8MUV8 499 aa12.33□□□□□ -0.44
CCM2-205ENST00000472223 KLLNB2CW77 178 aa12.33□□□□□ -0.44
CCM2-205ENST00000472223 DEFB135Q30KP9 77 aa12.33□□□□□ -0.44
CCM2-205ENST00000472223 CENPWQ5EE01 88 aa12.33□□□□□ -0.44
CCM2-205ENST00000472223 TMEM183AQ8IXX5 376 aa12.33□□□□□ -0.44
CCM2-205ENST00000472223 SMIM12Q96EX1 92 aa12.33□□□□□ -0.44
CCM2-205ENST00000472223 LINC01587Q99440 93 aa12.33□□□□□ -0.44
CCM2-205ENST00000472223 ASCL2Q99929 193 aa12.33□□□□□ -0.44
CCM2-205ENST00000472223 SMIM7Q9BQ49 75 aa12.33□□□□□ -0.44
CCM2-205ENST00000472223 SPATA25Q9BR10 227 aa12.33□□□□□ -0.44
CCM2-205ENST00000472223 IGHV3OR16-12A0A075B7B8 117 aa12.32□□□□□ -0.44
CCM2-205ENST00000472223 TRAV21A0A0B4J279 112 aa12.32□□□□□ -0.44
CCM2-205ENST00000472223 SPRY2O43597 315 aa12.32□□□□□ -0.44
CCM2-205ENST00000472223 GCGP01275 180 aa12.32□□□□□ -0.44
CCM2-205ENST00000472223 SOHLH1Q5JUK2 328 aa12.32□□□□□ -0.44
CCM2-205ENST00000472223 GFI1BQ5VTD9 330 aa12.32□□□□□ -0.44
CCM2-205ENST00000472223 SBSPONQ8IVN8 264 aa12.32□□□□□ -0.44
CCM2-205ENST00000472223 ZFAND2AQ8N6M9 145 aa12.32□□□□□ -0.44
CCM2-205ENST00000472223 DERL1Q9BUN8 251 aa12.32□□□□□ -0.44
CCM2-205ENST00000472223 TP53TG1Q9Y2A0 90 aa12.32□□□□□ -0.44
CCM2-205ENST00000472223 FABP5P3A8MUU1 101 aa12.31□□□□□ -0.44
CCM2-205ENST00000472223 C9JCJ5 164 aa12.31□□□□□ -0.44
CCM2-205ENST00000472223 H7BYZ3 331 aa12.31□□□□□ -0.44
CCM2-205ENST00000472223 NHLRC4P0CG21 123 aaPredicted RBP12.31□□□□□ -0.44
CCM2-205ENST00000472223 MGST1P10620 155 aaKnown RBP12.31□□□□□ -0.44
CCM2-205ENST00000472223 SRSF3P84103 164 aaKnown RBP12.31□□□□□ -0.44
CCM2-205ENST00000472223 BTN1A1Q13410 526 aa12.31□□□□□ -0.44
CCM2-205ENST00000472223 RNF183Q96D59 192 aa12.31□□□□□ -0.44
CCM2-205ENST00000472223 DAZAP1Q96EP5 407 aaKnown RBP12.31□□□□□ -0.44
CCM2-205ENST00000472223 C8orf49Q96NF6 230 aa12.31□□□□□ -0.44
CCM2-205ENST00000472223 CRXO43186 299 aaPredicted RBP12.3□□□□□ -0.44
CCM2-205ENST00000472223 FAM159AQ6UWV7 190 aa12.3□□□□□ -0.44
CCM2-205ENST00000472223 TVP23CQ96ET8 276 aa12.3□□□□□ -0.44
CCM2-205ENST00000472223 SMIM9A6NGZ8 99 aa12.29□□□□□ -0.44
CCM2-205ENST00000472223 PFN1P07737 140 aaKnown RBP12.29□□□□□ -0.44
CCM2-205ENST00000472223 GIG44P09565 113 aaPredicted RBP12.29□□□□□ -0.44
CCM2-205ENST00000472223 HTN1P15515 57 aa12.29□□□□□ -0.44
CCM2-205ENST00000472223 TMEM241Q24JQ0 296 aa12.29□□□□□ -0.44
CCM2-205ENST00000472223 FAM162BQ5T6X4 162 aa12.29□□□□□ -0.44
CCM2-205ENST00000472223 Q6AWC8 147 aa12.29□□□□□ -0.44
CCM2-205ENST00000472223 EIF4E3Q8N5X7 224 aaKnown RBP12.29□□□□□ -0.44
CCM2-205ENST00000472223 NHLRC2Q8NBF2 726 aa12.29□□□□□ -0.44
CCM2-205ENST00000472223 OR11H2Q8NH07 326 aa12.29□□□□□ -0.44
CCM2-205ENST00000472223 PYGO2Q9BRQ0 406 aa12.29□□□□□ -0.44
CCM2-205ENST00000472223 SFTA3P0C7M3 94 aa12.28□□□□□ -0.44
CCM2-205ENST00000472223 KIR3DS1Q14943 382 aa12.28□□□□□ -0.44
CCM2-205ENST00000472223 NDUFA5Q16718 116 aa12.28□□□□□ -0.44
CCM2-205ENST00000472223 PRR27Q6MZM9 219 aa12.28□□□□□ -0.44
CCM2-205ENST00000472223 COX8CQ7Z4L0 72 aa12.28□□□□□ -0.44
CCM2-205ENST00000472223 CSNK1G2-AS1Q8NCQ2 148 aa12.28□□□□□ -0.44
CCM2-205ENST00000472223 KCNS1Q96KK3 526 aa12.28□□□□□ -0.44
CCM2-205ENST00000472223 NAGKQ9UJ70 344 aa12.28□□□□□ -0.44
CCM2-205ENST00000472223 LY96Q9Y6Y9 160 aa12.28□□□□□ -0.44
CCM2-205ENST00000472223 C9JQL5 133 aa12.27□□□□□ -0.45
CCM2-205ENST00000472223 RRN3P1Q2M238 152 aa12.27□□□□□ -0.45
CCM2-205ENST00000472223 ZC2HC1AQ96GY0 325 aa12.27□□□□□ -0.45
CCM2-205ENST00000472223 TM2D3Q9BRN9 247 aa12.27□□□□□ -0.45
CCM2-205ENST00000472223 NAT8Q9UHE5 227 aa12.27□□□□□ -0.45
CCM2-205ENST00000472223 CBY3A6NI87 242 aa12.26□□□□□ -0.45
CCM2-205ENST00000472223 ZNF324O75467 553 aaPredicted RBP12.26□□□□□ -0.45
CCM2-205ENST00000472223 PRR9Q5T870 116 aa12.26□□□□□ -0.45
CCM2-205ENST00000472223 ZNF705AQ6ZN79 300 aaPredicted RBP12.26□□□□□ -0.45
CCM2-205ENST00000472223 C1orf158Q8N1D5 194 aa12.26□□□□□ -0.45
CCM2-205ENST00000472223 OCC1Q8TAD7 63 aa12.26□□□□□ -0.45
CCM2-205ENST00000472223 OVOL2Q9BRP0 275 aa12.26□□□□□ -0.45
CCM2-205ENST00000472223 MLST8Q9BVC4 326 aa12.26□□□□□ -0.45
CCM2-205ENST00000472223 IGHV1OR15-1A0A075B7D0 117 aa12.25□□□□□ -0.45
CCM2-205ENST00000472223 ORM1P02763 201 aa12.25□□□□□ -0.45
CCM2-205ENST00000472223 MIFP14174 115 aa12.25□□□□□ -0.45
CCM2-205ENST00000472223 NEU1Q99519 415 aa12.25□□□□□ -0.45
CCM2-205ENST00000472223 SDF2L1Q9HCN8 221 aa12.25□□□□□ -0.45
CCM2-205ENST00000472223 PGPEP1LA6NFU8 196 aa12.24□□□□□ -0.45
CCM2-205ENST00000472223 F8W036 122 aa12.24□□□□□ -0.45
CCM2-205ENST00000472223 SH2D1AO60880 128 aa12.24□□□□□ -0.45
CCM2-205ENST00000472223 ZNF80P51504 273 aaPredicted RBP12.24□□□□□ -0.45
CCM2-205ENST00000472223 MUC21Q5SSG8 566 aa12.24□□□□□ -0.45
CCM2-205ENST00000472223 TRBV20OR9-2A0A075B6H5 130 aa12.23□□□□□ -0.45
CCM2-205ENST00000472223 TRGV11A0A075B6L2 103 aa12.23□□□□□ -0.45
CCM2-205ENST00000472223 TMEM218A2RU14 115 aa12.23□□□□□ -0.45
CCM2-205ENST00000472223 TMEM189A5PLL7 270 aa12.23□□□□□ -0.45
CCM2-205ENST00000472223 ZNF705GA8MUZ8 300 aaPredicted RBP12.23□□□□□ -0.45
CCM2-205ENST00000472223 OR5I1Q13606 314 aa12.23□□□□□ -0.45
CCM2-205ENST00000472223 ADIRFQ15847 76 aa12.23□□□□□ -0.45
CCM2-205ENST00000472223 ZNF493Q6ZR52 646 aa12.23□□□□□ -0.45
CCM2-205ENST00000472223 LINC00467Q9BRT7 94 aa12.23□□□□□ -0.45
CCM2-205ENST00000472223 RETNQ9HD89 108 aa12.23□□□□□ -0.45
CCM2-205ENST00000472223 MEGF8Q7Z7M0 2845 aa12.23□□□□□ -0.45
CCM2-205ENST00000472223 XKRY2A2RUG3 117 aa12.22□□□□□ -0.45
CCM2-205ENST00000472223 B4DEV8 164 aa12.22□□□□□ -0.45
CCM2-205ENST00000472223 IGLV2-8P01709 118 aa12.22□□□□□ -0.45
CCM2-205ENST00000472223 P01737 135 aa12.22□□□□□ -0.45
CCM2-205ENST00000472223 RBMY1A1P0DJD3 496 aaKnown RBP12.22□□□□□ -0.45
CCM2-205ENST00000472223 RBMY1CP0DJD4 496 aa12.22□□□□□ -0.45
CCM2-205ENST00000472223 ERVFC1-1P60608 527 aa12.22□□□□□ -0.45
CCM2-205ENST00000472223 RBMY1FQ15415 496 aaKnown RBP12.22□□□□□ -0.45
CCM2-205ENST00000472223 C15orf54Q8N8G6 183 aa12.22□□□□□ -0.45
CCM2-205ENST00000472223 C16orf74Q96GX8 76 aa12.22□□□□□ -0.45
CCM2-205ENST00000472223 SNURFLB1AK76 121 aa12.21□□□□□ -0.45
CCM2-205ENST00000472223 S100A4P26447 101 aaKnown RBP12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms