RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 IGHV4-59P01825 116 aa11.47□□□□□ -0.57
UBXN11-213ENST00000472155 CRIP2P52943 208 aaPredicted RBP11.47□□□□□ -0.57
UBXN11-213ENST00000472155 ZNF493Q6ZR52 646 aa11.47□□□□□ -0.57
UBXN11-213ENST00000472155 GLMPQ8WWB7 406 aa11.47□□□□□ -0.57
UBXN11-213ENST00000472155 TMEM70Q9BUB7 260 aa11.47□□□□□ -0.57
UBXN11-213ENST00000472155 AKAP9Q99996 3911 aa11.47□□□□□ -0.57
UBXN11-213ENST00000472155 A0A096LNJ9 63 aa11.46□□□□□ -0.57
UBXN11-213ENST00000472155 FAM223BA6NKX1 122 aa11.46□□□□□ -0.57
UBXN11-213ENST00000472155 SRD5A1P18405 259 aa11.46□□□□□ -0.57
UBXN11-213ENST00000472155 FAM223AQ8IWN6 122 aa11.46□□□□□ -0.57
UBXN11-213ENST00000472155 hDV102S1A0JD36 115 aa11.46□□□□□ -0.58
UBXN11-213ENST00000472155 SYS1-DBNDD2H3BUS1 97 aa11.46□□□□□ -0.58
UBXN11-213ENST00000472155 FABP5P3A8MUU1 101 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 F6UB75 175 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 DEFB112Q30KQ8 113 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 TM4SF20Q53R12 229 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 Q6AWC8 147 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 OR4X2Q8NGF9 303 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 C16orf92Q96LL3 132 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 SIGLEC8Q9NYZ4 499 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 TMEM8BA6NDV4 472 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 B4DSR2 109 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 NPYP01303 97 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 GATA1P15976 413 aaPredicted RBP11.45□□□□□ -0.58
UBXN11-213ENST00000472155 ZNF25P17030 456 aaPredicted RBP11.45□□□□□ -0.58
UBXN11-213ENST00000472155 KIR3DS1Q14943 382 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 C21orf62-AS1Q17RA5 79 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 PRELID3AQ96N28 172 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 SPOCK3Q9BQ16 436 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 SLC50A1Q9BRV3 221 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 CHD6Q8TD26 2715 aa11.45□□□□□ -0.58
UBXN11-213ENST00000472155 OR4C46A6NHA9 309 aa11.44□□□□□ -0.58
UBXN11-213ENST00000472155 BMI1P35226 326 aa11.44□□□□□ -0.58
UBXN11-213ENST00000472155 TFPI2P48307 235 aa11.44□□□□□ -0.58
UBXN11-213ENST00000472155 PRSS3P2Q8NHM4 247 aa11.44□□□□□ -0.58
UBXN11-213ENST00000472155 A0A096LNT2 108 aa11.44□□□□□ -0.58
UBXN11-213ENST00000472155 RAB9AP51151 201 aa11.44□□□□□ -0.58
UBXN11-213ENST00000472155 PRSS57Q6UWY2 283 aa11.44□□□□□ -0.58
UBXN11-213ENST00000472155 Q6ZN92 141 aa11.44□□□□□ -0.58
UBXN11-213ENST00000472155 ARL6IP6Q8N6S5 226 aa11.44□□□□□ -0.58
UBXN11-213ENST00000472155 TMEM190Q8WZ59 177 aa11.44□□□□□ -0.58
UBXN11-213ENST00000472155 AP5S1Q9NUS5 200 aa11.44□□□□□ -0.58
UBXN11-213ENST00000472155 RNF185Q96GF1 192 aa11.43□□□□□ -0.58
UBXN11-213ENST00000472155 RPL11P62913 178 aaKnown RBP11.43□□□□□ -0.58
UBXN11-213ENST00000472155 OR10AG1Q8NH19 301 aa11.43□□□□□ -0.58
UBXN11-213ENST00000472155 ITPR3Q14573 2671 aa11.43□□□□□ -0.58
UBXN11-213ENST00000472155 TRAV9-2A0A087WT02 112 aa11.42□□□□□ -0.58
UBXN11-213ENST00000472155 TMEM78Q5T7P6 136 aa11.42□□□□□ -0.58
UBXN11-213ENST00000472155 U3KQK5 164 aa11.42□□□□□ -0.58
UBXN11-213ENST00000472155 SETD2Q9BYW2 2564 aaPredicted RBP11.42□□□□□ -0.58
UBXN11-213ENST00000472155 A0A1B0GW15 77 aa11.42□□□□□ -0.58
UBXN11-213ENST00000472155 CRXO43186 299 aaPredicted RBP11.42□□□□□ -0.58
UBXN11-213ENST00000472155 TGFAP01135 160 aa11.42□□□□□ -0.58
UBXN11-213ENST00000472155 EVI2AP22794 236 aa11.42□□□□□ -0.58
UBXN11-213ENST00000472155 FA2HQ7L5A8 372 aa11.42□□□□□ -0.58
UBXN11-213ENST00000472155 WFDC3Q8IUB2 231 aa11.42□□□□□ -0.58
UBXN11-213ENST00000472155 ZNF738Q8NE65 137 aa11.42□□□□□ -0.58
UBXN11-213ENST00000472155 RBAKDNA6NC62 111 aa11.41□□□□□ -0.58
UBXN11-213ENST00000472155 RNF223E7ERA6 249 aa11.41□□□□□ -0.58
UBXN11-213ENST00000472155 IGLV1-40P01703 118 aa11.41□□□□□ -0.58
UBXN11-213ENST00000472155 CKS2P33552 79 aa11.41□□□□□ -0.58
UBXN11-213ENST00000472155 LINC01559Q495D7 138 aa11.41□□□□□ -0.58
UBXN11-213ENST00000472155 CR1P17927 2039 aa11.41□□□□□ -0.58
UBXN11-213ENST00000472155 ORMDL3Q8N138 153 aa11.41□□□□□ -0.58
UBXN11-213ENST00000472155 ZNF843Q8N446 348 aa11.41□□□□□ -0.58
UBXN11-213ENST00000472155 PRRC2AP48634 2157 aaKnown RBP11.41□□□□□ -0.58
UBXN11-213ENST00000472155 NDUFA4O00483 81 aa11.4□□□□□ -0.58
UBXN11-213ENST00000472155 OR5AL1P0C617 328 aa11.4□□□□□ -0.58
UBXN11-213ENST00000472155 S100A7P31151 101 aa11.4□□□□□ -0.58
UBXN11-213ENST00000472155 CFHR3Q02985 330 aa11.4□□□□□ -0.58
UBXN11-213ENST00000472155 WFDC12Q8WWY7 111 aa11.4□□□□□ -0.58
UBXN11-213ENST00000472155 UQCR10Q9UDW1 63 aa11.4□□□□□ -0.58
UBXN11-213ENST00000472155 AGRNO00468 2067 aa11.4□□□□□ -0.58
UBXN11-213ENST00000472155 SOCS3O14543 225 aa11.4□□□□□ -0.58
UBXN11-213ENST00000472155 TCTAP57738 103 aa11.4□□□□□ -0.58
UBXN11-213ENST00000472155 C9orf47Q6ZRZ4 202 aa11.4□□□□□ -0.58
UBXN11-213ENST00000472155 ZNF747Q9BV97 191 aa11.4□□□□□ -0.58
UBXN11-213ENST00000472155 NPFFR1Q9GZQ6 430 aa11.4□□□□□ -0.58
UBXN11-213ENST00000472155 TRAV26-2A0A0B4J265 109 aa11.39□□□□□ -0.59
UBXN11-213ENST00000472155 IGHV7-4-1A0A0J9YVY3 117 aa11.39□□□□□ -0.59
UBXN11-213ENST00000472155 FBLL1A6NHQ2 334 aaKnown RBP11.39□□□□□ -0.59
UBXN11-213ENST00000472155 NPSP0C0P6 89 aa11.39□□□□□ -0.59
UBXN11-213ENST00000472155 RPS20P60866 119 aaKnown RBP11.39□□□□□ -0.59
UBXN11-213ENST00000472155 HIST2H2BDQ6DRA6 164 aa11.39□□□□□ -0.59
UBXN11-213ENST00000472155 STPG4Q8N801 248 aa11.39□□□□□ -0.59
UBXN11-213ENST00000472155 RHPN1-AS1Q9BWJ2 59 aa11.39□□□□□ -0.59
UBXN11-213ENST00000472155 TSPOP30536 169 aa11.39□□□□□ -0.59
UBXN11-213ENST00000472155 HNRNPA3P51991 378 aaKnown RBP11.39□□□□□ -0.59
UBXN11-213ENST00000472155 Q6ZVH6 145 aa11.39□□□□□ -0.59
UBXN11-213ENST00000472155 OR8A1Q8NGG7 326 aa11.39□□□□□ -0.59
UBXN11-213ENST00000472155 TMEM208Q9BTX3 173 aa11.39□□□□□ -0.59
UBXN11-213ENST00000472155 MAP1LC3CQ9BXW4 147 aa11.39□□□□□ -0.59
UBXN11-213ENST00000472155 TMEM191AQ9H0A3 160 aa11.39□□□□□ -0.59
UBXN11-213ENST00000472155 NIPBLQ6KC79 2804 aaeCLIP11.38□□□□□ -0.59
UBXN11-213ENST00000472155 LINC01356Q8N9X3 169 aa11.38□□□□□ -0.59
UBXN11-213ENST00000472155 USMG5Q96IX5 58 aa11.38□□□□□ -0.59
UBXN11-213ENST00000472155 DUX5Q96PT3 197 aa11.38□□□□□ -0.59
UBXN11-213ENST00000472155 CNFNQ9BYD5 112 aa11.38□□□□□ -0.59
UBXN11-213ENST00000472155 FLNAP21333 2647 aaKnown RBP11.38□□□□□ -0.59
UBXN11-213ENST00000472155 ACANP16112 2415 aa11.37□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms