RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 C9orf47Q6ZRZ4 202 aa12.51□□□□□ -0.41
SORT1-203ENST00000471996 MGST2Q99735 147 aa12.51□□□□□ -0.41
SORT1-203ENST00000471996 PRELID1Q9Y255 219 aa12.51□□□□□ -0.41
SORT1-203ENST00000471996 TRBV19A0A075B6N1 114 aa12.5□□□□□ -0.41
SORT1-203ENST00000471996 CENPXA8MT69 81 aa12.5□□□□□ -0.41
SORT1-203ENST00000471996 LECT2O14960 151 aa12.5□□□□□ -0.41
SORT1-203ENST00000471996 PPP1R1AQ13522 171 aa12.5□□□□□ -0.41
SORT1-203ENST00000471996 ZNF846Q147U1 533 aa12.5□□□□□ -0.41
SORT1-203ENST00000471996 OR10J3Q5JRS4 329 aa12.5□□□□□ -0.41
SORT1-203ENST00000471996 NHLRC2Q8NBF2 726 aa12.5□□□□□ -0.41
SORT1-203ENST00000471996 TNXBP22105 4242 aa12.5□□□□□ -0.41
SORT1-203ENST00000471996 TRAV4A0A0B4J268 109 aa12.49□□□□□ -0.41
SORT1-203ENST00000471996 BAK1Q16611 211 aa12.49□□□□□ -0.41
SORT1-203ENST00000471996 ACOT6Q3I5F7 207 aaPredicted RBP12.49□□□□□ -0.41
SORT1-203ENST00000471996 NDUFB6O95139 128 aa12.48□□□□□ -0.41
SORT1-203ENST00000471996 NDUFB4O95168 129 aa12.48□□□□□ -0.41
SORT1-203ENST00000471996 IGLV2-8P01709 118 aa12.48□□□□□ -0.41
SORT1-203ENST00000471996 ARL16Q0P5N6 197 aa12.48□□□□□ -0.41
SORT1-203ENST00000471996 TMEM78Q5T7P6 136 aa12.48□□□□□ -0.41
SORT1-203ENST00000471996 Q6ZRG5 221 aa12.48□□□□□ -0.41
SORT1-203ENST00000471996 SPXQ9BT56 116 aa12.48□□□□□ -0.41
SORT1-203ENST00000471996 GGACTQ9BVM4 153 aa12.48□□□□□ -0.41
SORT1-203ENST00000471996 IGKV2-40A0A087WW87 121 aaPredicted RBP12.47□□□□□ -0.41
SORT1-203ENST00000471996 IGKV2D-40P01614 121 aaPredicted RBP12.47□□□□□ -0.41
SORT1-203ENST00000471996 HIST1H1EP10412 219 aaKnown RBP12.47□□□□□ -0.41
SORT1-203ENST00000471996 OR4C5Q8NGB2 326 aa12.47□□□□□ -0.41
SORT1-203ENST00000471996 ZNF492Q9P255 531 aa12.47□□□□□ -0.41
SORT1-203ENST00000471996 PFN1P07737 140 aaKnown RBP12.46□□□□□ -0.41
SORT1-203ENST00000471996 MT1HL1P0DM35 61 aa12.46□□□□□ -0.41
SORT1-203ENST00000471996 PDE6HQ13956 83 aa12.46□□□□□ -0.41
SORT1-203ENST00000471996 MUC21Q5SSG8 566 aa12.46□□□□□ -0.41
SORT1-203ENST00000471996 EXOC3-AS1Q8N2X6 119 aa12.46□□□□□ -0.41
SORT1-203ENST00000471996 OR1L4Q8NGR5 311 aa12.46□□□□□ -0.41
SORT1-203ENST00000471996 TIMM9Q9Y5J7 89 aa12.46□□□□□ -0.41
SORT1-203ENST00000471996 C9orf170A2RU37 121 aa12.45□□□□□ -0.42
SORT1-203ENST00000471996 RBFOX3A6NFN3 312 aa12.45□□□□□ -0.42
SORT1-203ENST00000471996 TSC22D2O75157 780 aa12.45□□□□□ -0.42
SORT1-203ENST00000471996 CAMLGP49069 296 aa12.45□□□□□ -0.42
SORT1-203ENST00000471996 HNRNPA3P51991 378 aaKnown RBP12.45□□□□□ -0.42
SORT1-203ENST00000471996 TAS2R30P59541 319 aa12.45□□□□□ -0.42
SORT1-203ENST00000471996 LELP1Q5T871 98 aa12.45□□□□□ -0.42
SORT1-203ENST00000471996 SDHCQ99643 169 aaPredicted RBP12.45□□□□□ -0.42
SORT1-203ENST00000471996 TMEM14CQ9P0S9 112 aa12.45□□□□□ -0.42
SORT1-203ENST00000471996 GATA1P15976 413 aaPredicted RBP12.44□□□□□ -0.42
SORT1-203ENST00000471996 RPL37AP61513 92 aaKnown RBP12.44□□□□□ -0.42
SORT1-203ENST00000471996 MIC13Q5XKP0 118 aa12.44□□□□□ -0.42
SORT1-203ENST00000471996 LINC00299Q6ZSB3 139 aa12.44□□□□□ -0.42
SORT1-203ENST00000471996 C12orf45Q8N5I9 185 aaPredicted RBP12.44□□□□□ -0.42
SORT1-203ENST00000471996 BAALCQ8WXS3 180 aa12.44□□□□□ -0.42
SORT1-203ENST00000471996 DAZAP1Q96EP5 407 aaKnown RBP12.44□□□□□ -0.42
SORT1-203ENST00000471996 PFDN5Q99471 154 aa12.44□□□□□ -0.42
SORT1-203ENST00000471996 TRAV8-3A0A0A6YYJ7 113 aa12.43□□□□□ -0.42
SORT1-203ENST00000471996 TRBV7-9A0A0J9YWB2 115 aa12.43□□□□□ -0.42
SORT1-203ENST00000471996 IL7P13232 177 aa12.43□□□□□ -0.42
SORT1-203ENST00000471996 ZNF138P52744 262 aa12.43□□□□□ -0.42
SORT1-203ENST00000471996 RAB31Q13636 194 aa12.43□□□□□ -0.42
SORT1-203ENST00000471996 TMEM183BQ1AE95 376 aa12.43□□□□□ -0.42
SORT1-203ENST00000471996 NRARPQ7Z6K4 114 aa12.43□□□□□ -0.42
SORT1-203ENST00000471996 TMEM183AQ8IXX5 376 aa12.43□□□□□ -0.42
SORT1-203ENST00000471996 AAMDCQ9H7C9 122 aa12.43□□□□□ -0.42
SORT1-203ENST00000471996 IGHV3-16A0A0C4DH30 117 aa12.42□□□□□ -0.42
SORT1-203ENST00000471996 ZNF266Q14584 549 aa12.42□□□□□ -0.42
SORT1-203ENST00000471996 TRGV11A0A075B6L2 103 aa12.41□□□□□ -0.42
SORT1-203ENST00000471996 IGLV2-11P01706 119 aa12.41□□□□□ -0.42
SORT1-203ENST00000471996 PYYP10082 97 aa12.41□□□□□ -0.42
SORT1-203ENST00000471996 FAM122CQ6P4D5 195 aa12.41□□□□□ -0.42
SORT1-203ENST00000471996 Q8N976 141 aa12.41□□□□□ -0.42
SORT1-203ENST00000471996 Q8TAT8 98 aa12.41□□□□□ -0.42
SORT1-203ENST00000471996 M0R2P5 195 aa12.4□□□□□ -0.42
SORT1-203ENST00000471996 SCGB1D2O95969 90 aa12.4□□□□□ -0.42
SORT1-203ENST00000471996 BTCP35070 178 aa12.4□□□□□ -0.42
SORT1-203ENST00000471996 FAM159AQ6UWV7 190 aa12.4□□□□□ -0.42
SORT1-203ENST00000471996 Q8N3U1 123 aa12.4□□□□□ -0.42
SORT1-203ENST00000471996 FLVCR2Q9UPI3 526 aa12.4□□□□□ -0.42
SORT1-203ENST00000471996 RNF222A6NCQ9 220 aa12.39□□□□□ -0.43
SORT1-203ENST00000471996 Q6AWC8 147 aa12.39□□□□□ -0.43
SORT1-203ENST00000471996 SLC25A29Q8N8R3 303 aa12.39□□□□□ -0.43
SORT1-203ENST00000471996 SLC39A9Q9NUM3 307 aa12.39□□□□□ -0.43
SORT1-203ENST00000471996 COX11Q9Y6N1 276 aa12.39□□□□□ -0.43
SORT1-203ENST00000471996 C7orf66A4D0T2 115 aa12.38□□□□□ -0.43
SORT1-203ENST00000471996 LYRM1O43325 122 aa12.38□□□□□ -0.43
SORT1-203ENST00000471996 RPL29P47914 159 aaKnown RBP12.38□□□□□ -0.43
SORT1-203ENST00000471996 TOR2AQ5JU69 321 aa12.38□□□□□ -0.43
SORT1-203ENST00000471996 ATP6V0E2Q8NHE4 81 aa12.38□□□□□ -0.43
SORT1-203ENST00000471996 MITD1Q8WV92 249 aa12.38□□□□□ -0.43
SORT1-203ENST00000471996 PRADC1Q9BSG0 188 aa12.38□□□□□ -0.43
SORT1-203ENST00000471996 CCDC32Q9BV29 185 aa12.38□□□□□ -0.43
SORT1-203ENST00000471996 GTSF1LQ9H1H1 148 aa12.38□□□□□ -0.43
SORT1-203ENST00000471996 PLA2G10O15496 165 aa12.37□□□□□ -0.43
SORT1-203ENST00000471996 GPN1Q9HCN4 374 aaPredicted RBP12.37□□□□□ -0.43
SORT1-203ENST00000471996 WDR83OSQ9Y284 106 aa12.37□□□□□ -0.43
SORT1-203ENST00000471996 FBLL1A6NHQ2 334 aaKnown RBP12.36□□□□□ -0.43
SORT1-203ENST00000471996 RHOHQ15669 191 aa12.36□□□□□ -0.43
SORT1-203ENST00000471996 IAH1Q2TAA2 248 aaPredicted RBP12.36□□□□□ -0.43
SORT1-203ENST00000471996 DAZ4Q86SG3 579 aaKnown RBP12.36□□□□□ -0.43
SORT1-203ENST00000471996 C20orf85Q9H1P6 137 aa12.36□□□□□ -0.43
SORT1-203ENST00000471996 DAZ3Q9NR90 486 aaKnown RBP12.36□□□□□ -0.43
SORT1-203ENST00000471996 TRBV6-4A0A1B0GX49 114 aa12.35□□□□□ -0.43
SORT1-203ENST00000471996 TCRBP04435 133 aa12.35□□□□□ -0.43
SORT1-203ENST00000471996 S100ZQ8WXG8 99 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms