RNA–Protein interactions for RNA: ENST00000471842.1

LTA-215, Transcript of lymphotoxin alpha, humanhuman

TSL 2

Gene LTA, Length 1,497 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTA-215ENST00000471842 TSPOP30536 169 aa9.32□□□□□ -0.92
LTA-215ENST00000471842 RPL29P47914 159 aaKnown RBP9.32□□□□□ -0.92
LTA-215ENST00000471842 KIR3DS1Q14943 382 aa9.32□□□□□ -0.92
LTA-215ENST00000471842 VWC2Q2TAL6 325 aa9.32□□□□□ -0.92
LTA-215ENST00000471842 BLNKQ8WV28 456 aa9.32□□□□□ -0.92
LTA-215ENST00000471842 C16orf74Q96GX8 76 aa9.32□□□□□ -0.92
LTA-215ENST00000471842 BCL2L11O43521 198 aa9.31□□□□□ -0.92
LTA-215ENST00000471842 NUDT3O95989 172 aa9.31□□□□□ -0.92
LTA-215ENST00000471842 PYYP10082 97 aa9.31□□□□□ -0.92
LTA-215ENST00000471842 GUK1Q16774 197 aa9.31□□□□□ -0.92
LTA-215ENST00000471842 ATP6V1FQ16864 119 aa9.31□□□□□ -0.92
LTA-215ENST00000471842 GCSAMLQ5JQS6 135 aa9.31□□□□□ -0.92
LTA-215ENST00000471842 KCNRGQ8N5I3 272 aa9.31□□□□□ -0.92
LTA-215ENST00000471842 OR5C1Q8NGR4 320 aa9.31□□□□□ -0.92
LTA-215ENST00000471842 ATG101Q9BSB4 218 aa9.31□□□□□ -0.92
LTA-215ENST00000471842 NPCDR1Q9BY65 106 aa9.31□□□□□ -0.92
LTA-215ENST00000471842 NOP10Q9NPE3 64 aaKnown RBP9.31□□□□□ -0.92
LTA-215ENST00000471842 ZNF586Q9NXT0 402 aa9.31□□□□□ -0.92
LTA-215ENST00000471842 OR5AC2Q9NZP5 309 aa9.31□□□□□ -0.92
LTA-215ENST00000471842 TIMM9Q9Y5J7 89 aa9.31□□□□□ -0.92
LTA-215ENST00000471842 FXYD6-FXYD2A0A087WZ82 144 aa9.3□□□□□ -0.92
LTA-215ENST00000471842 TRAV12-3A0A0B4J271 114 aa9.3□□□□□ -0.92
LTA-215ENST00000471842 E5RGE8 158 aa9.3□□□□□ -0.92
LTA-215ENST00000471842 H7BYZ3 331 aa9.3□□□□□ -0.92
LTA-215ENST00000471842 LEPP41159 167 aa9.3□□□□□ -0.92
LTA-215ENST00000471842 CEBPGP53567 150 aa9.3□□□□□ -0.92
LTA-215ENST00000471842 IL15RAQ13261 267 aa9.3□□□□□ -0.92
LTA-215ENST00000471842 GFI1BQ5VTD9 330 aa9.3□□□□□ -0.92
LTA-215ENST00000471842 OR2D3Q8NGH3 330 aa9.3□□□□□ -0.92
LTA-215ENST00000471842 SAT2Q96F10 170 aaPredicted RBP9.3□□□□□ -0.92
LTA-215ENST00000471842 SLC25A31Q9H0C2 315 aa9.3□□□□□ -0.92
LTA-215ENST00000471842 DNAH10Q8IVF4 4471 aa9.3□□□□□ -0.92
LTA-215ENST00000471842 M0R3E3 92 aa9.29□□□□□ -0.92
LTA-215ENST00000471842 EREGO14944 169 aa9.29□□□□□ -0.92
LTA-215ENST00000471842 PPP1R2P9O14990 202 aa9.29□□□□□ -0.92
LTA-215ENST00000471842 ATP5G1P05496 136 aa9.29□□□□□ -0.92
LTA-215ENST00000471842 NPSP0C0P6 89 aa9.29□□□□□ -0.92
LTA-215ENST00000471842 ATP5G3P48201 142 aa9.29□□□□□ -0.92
LTA-215ENST00000471842 AKR1C8PQ5T2L2 129 aa9.29□□□□□ -0.92
LTA-215ENST00000471842 OR10D4PQ8NGN7 298 aa9.29□□□□□ -0.92
LTA-215ENST00000471842 ACTR3CQ9C0K3 210 aaPredicted RBP9.29□□□□□ -0.92
LTA-215ENST00000471842 TIMM8BQ9Y5J9 83 aaPredicted RBP9.29□□□□□ -0.92
LTA-215ENST00000471842 TRBV19A0A075B6N1 114 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 PLAC8L1A1L4L8 177 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 TMEM238C9JI98 176 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 MPDU1O75352 247 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 ERCC8Q13216 396 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 RHEBQ15382 184 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 EXOC3-AS1Q8N2X6 119 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 C15orf53Q8NAA6 179 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 TMEM263Q8WUH6 116 aaKnown RBP9.28□□□□□ -0.92
LTA-215ENST00000471842 RNF141Q8WVD5 230 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 SNHG12Q9BXW3 62 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 NMES1Q9C002 83 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 PRO1933Q9H354 126 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 AAMDCQ9H7C9 122 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 RPH3ALQ9UNE2 315 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 RNF222A6NCQ9 220 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 IFITM10A6NMD0 228 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 SNURFLB1AK76 121 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 NPIPB6E9PJ23 425 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 CT45A10P0DMU9 189 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 JOSD1Q15040 202 aaPredicted RBP9.28□□□□□ -0.92
LTA-215ENST00000471842 DMRTA1Q5VZB9 504 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 MIR17HGQ75NE6 70 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 RNASE8Q8TDE3 154 aaKnown RBP9.28□□□□□ -0.92
LTA-215ENST00000471842 SLC25A2Q9BXI2 301 aa9.28□□□□□ -0.92
LTA-215ENST00000471842 GAGE12BA1L429 117 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 CBY3A6NI87 242 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 PRSS29PA6NIE9 313 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 GAGE7O76087 117 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 GCGP01275 180 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 OR10J4P0C629 311 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 GAGE12FP0CL80 117 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 GAGE12GP0CL81 117 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 GAGE12IP0CL82 117 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 HIST1H1EP10412 219 aaKnown RBP9.27□□□□□ -0.93
LTA-215ENST00000471842 CYCSP99999 105 aaKnown RBP9.27□□□□□ -0.93
LTA-215ENST00000471842 OR5I1Q13606 314 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 ZNF493Q6ZR52 646 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 LINC00336Q6ZUF6 198 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 SMIM3Q9BZL3 60 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 KCNIP2Q9NS61 270 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 TMEM14CQ9P0S9 112 aa9.27□□□□□ -0.93
LTA-215ENST00000471842 IGKV2-40A0A087WW87 121 aaPredicted RBP9.26□□□□□ -0.93
LTA-215ENST00000471842 C17orf112F2Z3M2 114 aa9.26□□□□□ -0.93
LTA-215ENST00000471842 H0YIZ8 118 aa9.26□□□□□ -0.93
LTA-215ENST00000471842 ZNF253O75346 499 aa9.26□□□□□ -0.93
LTA-215ENST00000471842 IGKV2D-40P01614 121 aaPredicted RBP9.26□□□□□ -0.93
LTA-215ENST00000471842 H2BFSP57053 126 aa9.26□□□□□ -0.93
LTA-215ENST00000471842 ICAM4Q14773 271 aa9.26□□□□□ -0.93
LTA-215ENST00000471842 HIST3H2BBQ8N257 126 aa9.26□□□□□ -0.93
LTA-215ENST00000471842 PPP1R1CQ8WVI7 109 aa9.26□□□□□ -0.93
LTA-215ENST00000471842 C20orf144Q9BQM9 153 aa9.26□□□□□ -0.93
LTA-215ENST00000471842 OR7C2O60412 319 aa9.25□□□□□ -0.93
LTA-215ENST00000471842 NDUFB4O95168 129 aa9.25□□□□□ -0.93
LTA-215ENST00000471842 RNASE4P34096 147 aaKnown RBP9.25□□□□□ -0.93
LTA-215ENST00000471842 ERVFC1-1P60608 527 aa9.25□□□□□ -0.93
LTA-215ENST00000471842 SSX7Q7RTT5 188 aa9.25□□□□□ -0.93
LTA-215ENST00000471842 WDR61Q9GZS3 305 aaKnown RBP9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms