RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 LINC01551Q86U37 167 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 SBSPONQ8IVN8 264 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 NHLRC2Q8NBF2 726 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 CMTM2Q8TAZ6 248 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 FMC1Q96HJ9 113 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 CARHSP1Q9Y2V2 147 aaKnown RBP7.16□□□□□ -1.26
SF3A1-207ENST00000471342 X6R8D5 127 aa7.16□□□□□ -1.26
SF3A1-207ENST00000471342 NBEAL2Q6ZNJ1 2754 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 KIR2DL5BA0A0G2JN68 375 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 KIR2DL5BA0A0G2JPC4 375 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 DUSP14O95147 198 aaKnown RBP7.15□□□□□ -1.26
SF3A1-207ENST00000471342 AKR1C3P42330 323 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 RPL23P62829 140 aaKnown RBP7.15□□□□□ -1.26
SF3A1-207ENST00000471342 OR5I1Q13606 314 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 DMRTA1Q5VZB9 504 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 EBLN2Q6P2I7 272 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 GTSCR1Q86UQ5 136 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 BAGE2Q86Y30 109 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 KIR2DL5AQ8N109 375 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 OR4B1Q8NGF8 309 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 OR10J6PQ8NGY7 276 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 KIR2DL5BQ8NHK3 375 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 ZFP30Q9Y2G7 519 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 LY96Q9Y6Y9 160 aa7.15□□□□□ -1.26
SF3A1-207ENST00000471342 AZU1P20160 251 aa7.14□□□□□ -1.27
SF3A1-207ENST00000471342 CSN1S1P47710 185 aa7.14□□□□□ -1.27
SF3A1-207ENST00000471342 IL17DQ8TAD2 202 aa7.14□□□□□ -1.27
SF3A1-207ENST00000471342 TM2D3Q9BRN9 247 aa7.14□□□□□ -1.27
SF3A1-207ENST00000471342 LINC00467Q9BRT7 94 aa7.14□□□□□ -1.27
SF3A1-207ENST00000471342 CSTL1Q9H114 145 aa7.14□□□□□ -1.27
SF3A1-207ENST00000471342 TREM1Q9NP99 234 aa7.14□□□□□ -1.27
SF3A1-207ENST00000471342 TP53TG3Q9ULZ0 132 aa7.14□□□□□ -1.27
SF3A1-207ENST00000471342 LOC102724200A0A096LPH7 203 aaPredicted RBP7.13□□□□□ -1.27
SF3A1-207ENST00000471342 FBLL1A6NHQ2 334 aaKnown RBP7.13□□□□□ -1.27
SF3A1-207ENST00000471342 SPRY2O43597 315 aa7.13□□□□□ -1.27
SF3A1-207ENST00000471342 S100A9P06702 114 aaKnown RBP7.13□□□□□ -1.27
SF3A1-207ENST00000471342 CDKN1BP46527 198 aa7.13□□□□□ -1.27
SF3A1-207ENST00000471342 TDRG1Q3Y452 100 aa7.13□□□□□ -1.27
SF3A1-207ENST00000471342 ATRAIDQ6UW56 229 aa7.13□□□□□ -1.27
SF3A1-207ENST00000471342 STHQ8IWL8 128 aa7.13□□□□□ -1.27
SF3A1-207ENST00000471342 ISOC2Q96AB3 205 aa7.13□□□□□ -1.27
SF3A1-207ENST00000471342 SMIM12Q96EX1 92 aa7.13□□□□□ -1.27
SF3A1-207ENST00000471342 OVOL2Q9BRP0 275 aa7.13□□□□□ -1.27
SF3A1-207ENST00000471342 XCL2Q9UBD3 114 aa7.13□□□□□ -1.27
SF3A1-207ENST00000471342 COL7A1Q02388 2944 aa7.13□□□□□ -1.27
SF3A1-207ENST00000471342 STARD9Q9P2P6 4700 aa7.12□□□□□ -1.27
SF3A1-207ENST00000471342 C7orf71A4D174 169 aa7.12□□□□□ -1.27
SF3A1-207ENST00000471342 ZNF727A8MUV8 499 aa7.12□□□□□ -1.27
SF3A1-207ENST00000471342 SH2D1AO60880 128 aa7.12□□□□□ -1.27
SF3A1-207ENST00000471342 SAPCD1Q5SSQ6 148 aa7.12□□□□□ -1.27
SF3A1-207ENST00000471342 TMEM78Q5T7P6 136 aa7.12□□□□□ -1.27
SF3A1-207ENST00000471342 MORN3Q6PF18 240 aaPredicted RBP7.12□□□□□ -1.27
SF3A1-207ENST00000471342 C11orf72Q8NBR9 251 aa7.12□□□□□ -1.27
SF3A1-207ENST00000471342 NUDT10Q8NFP7 164 aa7.12□□□□□ -1.27
SF3A1-207ENST00000471342 RNF183Q96D59 192 aa7.12□□□□□ -1.27
SF3A1-207ENST00000471342 NUDT11Q96G61 164 aa7.12□□□□□ -1.27
SF3A1-207ENST00000471342 SMIM7Q9BQ49 75 aa7.12□□□□□ -1.27
SF3A1-207ENST00000471342 SEC11CQ9BY50 192 aa7.12□□□□□ -1.27
SF3A1-207ENST00000471342 RETNQ9HD89 108 aa7.12□□□□□ -1.27
SF3A1-207ENST00000471342 TRAV12-3A0A0B4J271 114 aa7.11□□□□□ -1.27
SF3A1-207ENST00000471342 KRBOX1C9JBD0 128 aa7.11□□□□□ -1.27
SF3A1-207ENST00000471342 J3KRW8 73 aa7.11□□□□□ -1.27
SF3A1-207ENST00000471342 PFN1P07737 140 aaKnown RBP7.11□□□□□ -1.27
SF3A1-207ENST00000471342 RNASE3P12724 160 aaKnown RBP7.11□□□□□ -1.27
SF3A1-207ENST00000471342 RNASE4P34096 147 aaKnown RBP7.11□□□□□ -1.27
SF3A1-207ENST00000471342 RPL19P84098 196 aaKnown RBP7.11□□□□□ -1.27
SF3A1-207ENST00000471342 DEFA6Q01524 100 aa7.11□□□□□ -1.27
SF3A1-207ENST00000471342 TMEM241Q24JQ0 296 aa7.11□□□□□ -1.27
SF3A1-207ENST00000471342 FAM74A3Q4VXF1 159 aa7.11□□□□□ -1.27
SF3A1-207ENST00000471342 SOHLH1Q5JUK2 328 aa7.11□□□□□ -1.27
SF3A1-207ENST00000471342 DNLZQ5SXM8 178 aa7.11□□□□□ -1.27
SF3A1-207ENST00000471342 FAM231DQ6ZW35 169 aa7.11□□□□□ -1.27
SF3A1-207ENST00000471342 Q8NAQ8 132 aa7.11□□□□□ -1.27
SF3A1-207ENST00000471342 RNASE7Q9H1E1 156 aaKnown RBP7.11□□□□□ -1.27
SF3A1-207ENST00000471342 ZMAT5Q9UDW3 170 aaKnown RBP7.11□□□□□ -1.27
SF3A1-207ENST00000471342 V9GYV3 84 aa7.11□□□□□ -1.27
SF3A1-207ENST00000471342 PLECQ15149 4684 aaKnown RBP7.1□□□□□ -1.27
SF3A1-207ENST00000471342 GNRH2O43555 120 aa7.1□□□□□ -1.27
SF3A1-207ENST00000471342 CA1P00915 261 aaPredicted RBP7.1□□□□□ -1.27
SF3A1-207ENST00000471342 LEPP41159 167 aa7.1□□□□□ -1.27
SF3A1-207ENST00000471342 GNG4P50150 75 aa7.1□□□□□ -1.27
SF3A1-207ENST00000471342 ANXA2RQ3ZCQ2 193 aa7.1□□□□□ -1.27
SF3A1-207ENST00000471342 LINC01559Q495D7 138 aa7.1□□□□□ -1.27
SF3A1-207ENST00000471342 SMUG1Q53HV7 270 aa7.1□□□□□ -1.27
SF3A1-207ENST00000471342 Q6ZWC4 215 aa7.1□□□□□ -1.27
SF3A1-207ENST00000471342 RNASE8Q8TDE3 154 aaKnown RBP7.1□□□□□ -1.27
SF3A1-207ENST00000471342 GTSF1Q8WW33 167 aa7.1□□□□□ -1.27
SF3A1-207ENST00000471342 YPEL4Q96NS1 127 aa7.1□□□□□ -1.27
SF3A1-207ENST00000471342 SCRT2Q9NQ03 307 aa7.1□□□□□ -1.27
SF3A1-207ENST00000471342 MDFICQ9P1T7 246 aa7.1□□□□□ -1.27
SF3A1-207ENST00000471342 NAT8Q9UHE5 227 aa7.1□□□□□ -1.27
SF3A1-207ENST00000471342 IGHV3-16A0A0C4DH30 117 aa7.09□□□□□ -1.27
SF3A1-207ENST00000471342 FABP5P3A8MUU1 101 aa7.09□□□□□ -1.27
SF3A1-207ENST00000471342 IGLC6P0CF74 106 aa7.09□□□□□ -1.27
SF3A1-207ENST00000471342 CEBPGP53567 150 aa7.09□□□□□ -1.27
SF3A1-207ENST00000471342 UBE2G1P62253 170 aa7.09□□□□□ -1.27
SF3A1-207ENST00000471342 NDUFA5Q16718 116 aa7.09□□□□□ -1.27
SF3A1-207ENST00000471342 NEU1Q99519 415 aa7.09□□□□□ -1.27
SF3A1-207ENST00000471342 C20orf144Q9BQM9 153 aa7.09□□□□□ -1.27
SF3A1-207ENST00000471342 SSBP4Q9BWG4 385 aaPredicted RBP7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms