RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 LINC00479Q96M42 142 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 SMIM7Q9BQ49 75 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 PAXXQ9BUH6 204 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 TMEM14CQ9P0S9 112 aa3.53□□□□□ -1.84
SF3B1-208ENST00000470268 TRBV19A0A075B6N1 114 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 TGIF2-C20orf24A0A0A6YYL0 155 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 TRAV8-2A0A0B4J237 113 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 GGTLC3B5MD39 225 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 CXorf1O96002 111 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 MT-ND4LP03901 98 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 NBEAP1P0C6P0 100 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 HIST1H1EP10412 219 aaKnown RBP3.52□□□□□ -1.85
SF3B1-208ENST00000470268 RPL7P18124 248 aaKnown RBP3.52□□□□□ -1.85
SF3B1-208ENST00000470268 HLA-DMBP28068 263 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 TFPI2P48307 235 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 TAS2R45P59539 299 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 UBE2L3P68036 154 aaKnown RBP3.52□□□□□ -1.85
SF3B1-208ENST00000470268 ADIRFQ15847 76 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 BLNKQ8WV28 456 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 TVP23CQ96ET8 276 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 GRAMD2BQ96HH9 432 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 SGK494Q96LW2 274 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 YPEL4Q96NS1 127 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 NIPSNAP3BQ9BS92 247 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 C2orf88Q9BSF0 95 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 MS4A6AQ9H2W1 248 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 SDF2L1Q9HCN8 221 aa3.52□□□□□ -1.85
SF3B1-208ENST00000470268 ZNF256Q9Y2P7 627 aaPredicted RBP3.52□□□□□ -1.85
SF3B1-208ENST00000470268 A0A087X0K7 114 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 RHODO00212 210 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 GALR1P47211 349 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 DEFB1P60022 68 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 RANP62826 216 aaKnown RBP3.51□□□□□ -1.85
SF3B1-208ENST00000470268 RPL23P62829 140 aaKnown RBP3.51□□□□□ -1.85
SF3B1-208ENST00000470268 SLAQ13239 276 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 PYY3Q5JQD4 70 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 EXOC3-AS1Q8N2X6 119 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 RNF182Q8N6D2 247 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 STXBP6Q8NFX7 210 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 DYNLRB2Q8TF09 96 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 ASCL2Q99929 193 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 NRN1Q9NPD7 142 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 ZNF331Q9NQX6 463 aaPredicted RBP3.51□□□□□ -1.85
SF3B1-208ENST00000470268 A0A0A0MQY5 61 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 HELTA6NFD8 242 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 K7EQG2 157 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 M0R3E3 92 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 IFNA1P01562 189 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 RAB5AP20339 215 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 DDTP30046 118 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 GNG5P63218 68 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 OR5I1Q13606 314 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 ELOBQ15370 118 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 RHEBQ15382 184 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 C9orf66Q5T8R8 295 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 RBPMS2Q6ZRY4 209 aaKnown RBP3.51□□□□□ -1.85
SF3B1-208ENST00000470268 S100A7AQ86SG5 101 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 NHLRC2Q8NBF2 726 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 ZNF479Q96JC4 524 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 GPR82Q96P67 336 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 SMDT1Q9H4I9 107 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 MANBALQ9NQG1 85 aa3.51□□□□□ -1.85
SF3B1-208ENST00000470268 PKD1L1Q8TDX9 2849 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 IFITM10A6NMD0 228 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 ZNF705FA8MVS1 300 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-208ENST00000470268 PRAC2D3DTV9 90 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 G3V4G9 280 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 K7EN84 100 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 CD7P09564 240 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 FRMD6-AS1P0C7T7 363 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 ZNF688P0C7X2 276 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 S100A2P29034 98 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 S100A7P31151 101 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 INSL3P51460 131 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 KRTAP10-11P60412 298 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 PKIAP61925 76 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 PDE6HQ13956 83 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 TMEM241Q24JQ0 296 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 ODF3L2Q3SX64 289 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 LBHQ53QV2 105 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-208ENST00000470268 SERTAD4-AS1Q5TG53 156 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 LINC01551Q86U37 167 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 SPAG8Q99932 426 aaPredicted RBP3.5□□□□□ -1.85
SF3B1-208ENST00000470268 PRO1933Q9H354 126 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 Q9H3A6 140 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 TMEM167BQ9NRX6 74 aa3.5□□□□□ -1.85
SF3B1-208ENST00000470268 TRAV25A0A0B4J276 109 aa3.49□□□□□ -1.85
SF3B1-208ENST00000470268 A0A1W2PRE2 83 aa3.49□□□□□ -1.85
SF3B1-208ENST00000470268 PGPA6NDG6 321 aa3.49□□□□□ -1.85
SF3B1-208ENST00000470268 CBY3A6NI87 242 aa3.49□□□□□ -1.85
SF3B1-208ENST00000470268 F6UB75 175 aa3.49□□□□□ -1.85
SF3B1-208ENST00000470268 TMEM250H0YL14 139 aa3.49□□□□□ -1.85
SF3B1-208ENST00000470268 ZNF253O75346 499 aa3.49□□□□□ -1.85
SF3B1-208ENST00000470268 PIK3CD-AS1Q5SR53 167 aa3.49□□□□□ -1.85
SF3B1-208ENST00000470268 DNLZQ5SXM8 178 aa3.49□□□□□ -1.85
SF3B1-208ENST00000470268 GDF5OSQ5U4N7 250 aa3.49□□□□□ -1.85
SF3B1-208ENST00000470268 OCC1Q8TAD7 63 aa3.49□□□□□ -1.85
SF3B1-208ENST00000470268 MCRIP2Q9BUT9 160 aaKnown RBP3.49□□□□□ -1.85
SF3B1-208ENST00000470268 TPPP3Q9BW30 176 aa3.49□□□□□ -1.85
SF3B1-208ENST00000470268 WFDC10AQ9H1F0 79 aa3.49□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 112.4 ms