RNA–Protein interactions for RNA: ENST00000470170.1

COL11A1-208, Transcript of collagen type XI alpha 1 chain, humanhuman

TSL 2

Gene COL11A1, Length 785 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-208ENST00000470170 IGLV3-9A0A075B6K5 115 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 TRAV7A0A075B6U4 112 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 IGKV1OR2-108A0A075B7D4 117 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 TRBV10-2A0A0K0K1G8 114 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 OOSP1A8MZH6 123 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 H3BQ85 93 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 H7C2G1 150 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 EDF1O60869 148 aaKnown RBP2.37□□□□□ -2.03
COL11A1-208ENST00000470170 SNCGO76070 127 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 SHBGP04278 402 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 GYPBP06028 91 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 IGLC1P0CG04 106 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 C12orf73Q69YU5 71 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 LINC00471Q8N535 108 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 Q8NDZ9 215 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 ATP6V0E2Q8NHE4 81 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 CCL4L1Q8NHW4 92 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 CLEC2BQ92478 149 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 FAM215AQ9Y5M1 114 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 SCAF11Q99590 1463 aaKnown RBP2.37□□□□□ -2.03
COL11A1-208ENST00000470170 SIPA1L1O43166 1804 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 CUL7Q14999 1698 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 OBSL1O75147 1896 aa2.37□□□□□ -2.03
COL11A1-208ENST00000470170 ATG2AQ2TAZ0 1938 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 ALKQ9UM73 1620 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 IGHV1-24A0A0C4DH33 117 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 C17orf98A8MV24 154 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 ZNF705FA8MVS1 300 aaPredicted RBP2.36□□□□□ -2.03
COL11A1-208ENST00000470170 H3BQ15 152 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 SSSCA1O60232 199 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 PITX3O75364 302 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 ZNF737O75373 536 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 IL7P13232 177 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 DCDP81605 110 aaKnown RBP2.36□□□□□ -2.03
COL11A1-208ENST00000470170 IQCJQ1A5X6 159 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 ESRGQ1W209 222 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 MIC13Q5XKP0 118 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 Q6ZS92 163 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 SPTSSAQ969W0 71 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 RETNLBQ9BQ08 111 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 NABP2Q9BQ15 211 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 TMEM242Q9NWH2 141 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 RPRD2Q5VT52 1461 aaKnown RBP2.36□□□□□ -2.03
COL11A1-208ENST00000470170 LRRC9Q6ZRR7 1453 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 ATG2BQ96BY7 2078 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 DNMBPQ6XZF7 1577 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 MROH2BQ7Z745 1585 aa2.36□□□□□ -2.03
COL11A1-208ENST00000470170 LRP6O75581 1613 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 POLA1P09884 1462 aaPredicted RBP2.35□□□□□ -2.03
COL11A1-208ENST00000470170 IGKV1D-37A0A075B6S9 117 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 J3QLW9 94 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 NDUFB6O95139 128 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 IL5P05113 134 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 PIPP12273 146 aaPredicted RBP2.35□□□□□ -2.03
COL11A1-208ENST00000470170 COL8A2P25067 703 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 FAM229BQ4G0N7 80 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 Q6ZS52 159 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 C1orf64Q8NEQ6 169 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 VSTM2AQ8TAG5 236 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 TSKUQ8WUA8 353 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 Q96M85 177 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 S100A13Q99584 98 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 SMIM7Q9BQ49 75 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 CST11Q9H112 138 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 COL18A1P39060 1754 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 N4BP2Q86UW6 1770 aaPredicted RBP2.35□□□□□ -2.03
COL11A1-208ENST00000470170 DSCAMO60469 2012 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 TRPM1Q7Z4N2 1603 aa2.35□□□□□ -2.03
COL11A1-208ENST00000470170 COL27A1Q8IZC6 1860 aaPredicted RBP2.35□□□□□ -2.03
COL11A1-208ENST00000470170 EML6Q6ZMW3 1958 aa2.34□□□□□ -2.03
COL11A1-208ENST00000470170 ARHGEF28Q8N1W1 1705 aaKnown RBP2.34□□□□□ -2.03
COL11A1-208ENST00000470170 MUC21A0A0G2JKD1 596 aa2.34□□□□□ -2.03
COL11A1-208ENST00000470170 hDV103S1A0JD37 113 aa2.34□□□□□ -2.03
COL11A1-208ENST00000470170 M0R233 179 aa2.34□□□□□ -2.03
COL11A1-208ENST00000470170 PROSCO94903 275 aa2.34□□□□□ -2.03
COL11A1-208ENST00000470170 ASIPP42127 132 aa2.34□□□□□ -2.03
COL11A1-208ENST00000470170 ATP5EP56381 51 aaPredicted RBP2.34□□□□□ -2.03
COL11A1-208ENST00000470170 ZNF816Q0VGE8 651 aaPredicted RBP2.34□□□□□ -2.03
COL11A1-208ENST00000470170 FOXF1Q12946 379 aa2.34□□□□□ -2.03
COL11A1-208ENST00000470170 PEA15Q15121 130 aa2.34□□□□□ -2.03
COL11A1-208ENST00000470170 POP5Q969H6 163 aaKnown RBP2.34□□□□□ -2.03
COL11A1-208ENST00000470170 LSM10Q969L4 123 aaKnown RBP2.34□□□□□ -2.03
COL11A1-208ENST00000470170 SLC50A1Q9BRV3 221 aa2.34□□□□□ -2.03
COL11A1-208ENST00000470170 C14orf132Q9NPU4 83 aa2.34□□□□□ -2.03
COL11A1-208ENST00000470170 LINC00312Q9Y6C7 94 aa2.34□□□□□ -2.03
COL11A1-208ENST00000470170 GLI3P10071 1580 aa2.34□□□□□ -2.03
COL11A1-208ENST00000470170 MYH7BA7E2Y1 1941 aa2.34□□□□□ -2.04
COL11A1-208ENST00000470170 KDM5AP29375 1690 aaKnown RBP2.34□□□□□ -2.04
COL11A1-208ENST00000470170 FYCO1Q9BQS8 1478 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 MAP3K1Q13233 1512 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 KDM5DQ9BY66 1539 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 ARHGEF12Q9NZN5 1544 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 ADGRB1O14514 1584 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 C11orf86A6NJI1 115 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 E7EQL1 145 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 F8W1H4 67 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 RPL36A-HNRNPH2H7BZ11 118 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 GNRH2O43555 120 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 GYPAP02724 150 aa2.33□□□□□ -2.04
COL11A1-208ENST00000470170 TRAPPC2P0DI81 140 aa2.33□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms