RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 LYPD1Q8N2G4 141 aa12□□□□□ -0.49
COL7A1-208ENST00000470076 PHYHIPLQ96FC7 376 aa12□□□□□ -0.49
COL7A1-208ENST00000470076 MRPL16Q9NX20 251 aaKnown RBP12□□□□□ -0.49
COL7A1-208ENST00000470076 RBAKDNA6NC62 111 aa11.99□□□□□ -0.49
COL7A1-208ENST00000470076 H0YIZ8 118 aa11.99□□□□□ -0.49
COL7A1-208ENST00000470076 OR7C2O60412 319 aa11.99□□□□□ -0.49
COL7A1-208ENST00000470076 PRAF2O60831 178 aa11.99□□□□□ -0.49
COL7A1-208ENST00000470076 IGHV3-53P01767 116 aa11.99□□□□□ -0.49
COL7A1-208ENST00000470076 Q6ZQT7 251 aa11.99□□□□□ -0.49
COL7A1-208ENST00000470076 Q8N1X5 172 aa11.99□□□□□ -0.49
COL7A1-208ENST00000470076 Q8TAT8 98 aa11.99□□□□□ -0.49
COL7A1-208ENST00000470076 HHLA3Q9XRX5 114 aa11.99□□□□□ -0.49
COL7A1-208ENST00000470076 NXPH4O95158 308 aa11.98□□□□□ -0.49
COL7A1-208ENST00000470076 CRYBA4P53673 196 aa11.98□□□□□ -0.49
COL7A1-208ENST00000470076 RANP62826 216 aaKnown RBP11.98□□□□□ -0.49
COL7A1-208ENST00000470076 ZNF266Q14584 549 aa11.98□□□□□ -0.49
COL7A1-208ENST00000470076 MRPL23Q16540 153 aaKnown RBP11.98□□□□□ -0.49
COL7A1-208ENST00000470076 Q6ZRN7 208 aaPredicted RBP11.98□□□□□ -0.49
COL7A1-208ENST00000470076 FHL2Q14192 279 aa11.97□□□□□ -0.49
COL7A1-208ENST00000470076 ATP5SQ99766 215 aa11.97□□□□□ -0.49
COL7A1-208ENST00000470076 LENEPQ9Y5L5 61 aa11.97□□□□□ -0.49
COL7A1-208ENST00000470076 UPK1BO75841 260 aa11.96□□□□□ -0.49
COL7A1-208ENST00000470076 UBE2L3P68036 154 aaKnown RBP11.96□□□□□ -0.49
COL7A1-208ENST00000470076 PPP1R1CQ8WVI7 109 aa11.96□□□□□ -0.49
COL7A1-208ENST00000470076 C8orf49Q96NF6 230 aa11.96□□□□□ -0.49
COL7A1-208ENST00000470076 INMT-MINDY4F8WBC2 141 aa11.95□□□□□ -0.5
COL7A1-208ENST00000470076 TAS2R45P59539 299 aa11.95□□□□□ -0.5
COL7A1-208ENST00000470076 KHDC3LQ587J8 217 aa11.95□□□□□ -0.5
COL7A1-208ENST00000470076 FFAR4Q5NUL3 377 aa11.95□□□□□ -0.5
COL7A1-208ENST00000470076 MUC21Q5SSG8 566 aa11.95□□□□□ -0.5
COL7A1-208ENST00000470076 Q6AWC8 147 aa11.95□□□□□ -0.5
COL7A1-208ENST00000470076 LYPD5Q6UWN5 251 aa11.95□□□□□ -0.5
COL7A1-208ENST00000470076 NEGR1Q7Z3B1 354 aa11.95□□□□□ -0.5
COL7A1-208ENST00000470076 SPXQ9BT56 116 aa11.95□□□□□ -0.5
COL7A1-208ENST00000470076 SCRT2Q9NQ03 307 aa11.95□□□□□ -0.5
COL7A1-208ENST00000470076 TRGV4A0A0C4DH28 118 aa11.94□□□□□ -0.5
COL7A1-208ENST00000470076 EREGO14944 169 aa11.94□□□□□ -0.5
COL7A1-208ENST00000470076 PET100P0DJ07 73 aa11.94□□□□□ -0.5
COL7A1-208ENST00000470076 H2BFSP57053 126 aa11.94□□□□□ -0.5
COL7A1-208ENST00000470076 FAM159AQ6UWV7 190 aa11.94□□□□□ -0.5
COL7A1-208ENST00000470076 NFE4Q86UQ8 179 aa11.94□□□□□ -0.5
COL7A1-208ENST00000470076 IQCF2Q8IXL9 164 aa11.94□□□□□ -0.5
COL7A1-208ENST00000470076 TMED6Q8WW62 240 aa11.94□□□□□ -0.5
COL7A1-208ENST00000470076 RASL10AQ92737 203 aa11.94□□□□□ -0.5
COL7A1-208ENST00000470076 PGPEP1Q9NXJ5 209 aa11.94□□□□□ -0.5
COL7A1-208ENST00000470076 MDFICQ9P1T7 246 aa11.94□□□□□ -0.5
COL7A1-208ENST00000470076 HSPB11Q9Y547 144 aa11.94□□□□□ -0.5
COL7A1-208ENST00000470076 TRGV11A0A075B6L2 103 aa11.93□□□□□ -0.5
COL7A1-208ENST00000470076 TRAV9-2A0A087WT02 112 aa11.93□□□□□ -0.5
COL7A1-208ENST00000470076 DIRC3C9JPN6 131 aa11.93□□□□□ -0.5
COL7A1-208ENST00000470076 IFNA5P01569 189 aa11.93□□□□□ -0.5
COL7A1-208ENST00000470076 ERVFC1-1P60608 527 aa11.93□□□□□ -0.5
COL7A1-208ENST00000470076 OR10G4Q8NGN3 311 aa11.93□□□□□ -0.5
COL7A1-208ENST00000470076 SCGB1C1Q8TD33 95 aa11.93□□□□□ -0.5
COL7A1-208ENST00000470076 K7EP13 123 aa11.92□□□□□ -0.5
COL7A1-208ENST00000470076 MPC2O95563 127 aa11.92□□□□□ -0.5
COL7A1-208ENST00000470076 SRIP30626 198 aa11.92□□□□□ -0.5
COL7A1-208ENST00000470076 TMEM183BQ1AE95 376 aa11.92□□□□□ -0.5
COL7A1-208ENST00000470076 TMEM183AQ8IXX5 376 aa11.92□□□□□ -0.5
COL7A1-208ENST00000470076 PCNPQ8WW12 178 aaKnown RBP11.92□□□□□ -0.5
COL7A1-208ENST00000470076 ZNF479Q96JC4 524 aa11.92□□□□□ -0.5
COL7A1-208ENST00000470076 MARVELD1Q9BSK0 173 aa11.92□□□□□ -0.5
COL7A1-208ENST00000470076 LY96Q9Y6Y9 160 aa11.92□□□□□ -0.5
COL7A1-208ENST00000470076 K7EQD1 137 aa11.91□□□□□ -0.5
COL7A1-208ENST00000470076 ORM1P02763 201 aa11.91□□□□□ -0.5
COL7A1-208ENST00000470076 SFTA3P0C7M3 94 aa11.91□□□□□ -0.5
COL7A1-208ENST00000470076 RPL12P30050 165 aaKnown RBP11.91□□□□□ -0.5
COL7A1-208ENST00000470076 IFITM3Q01628 133 aa11.91□□□□□ -0.5
COL7A1-208ENST00000470076 TDRG1Q3Y452 100 aa11.91□□□□□ -0.5
COL7A1-208ENST00000470076 FAM74A1Q5RGS3 127 aa11.91□□□□□ -0.5
COL7A1-208ENST00000470076 CMTM2Q8TAZ6 248 aa11.91□□□□□ -0.5
COL7A1-208ENST00000470076 HYLS1Q96M11 299 aa11.91□□□□□ -0.5
COL7A1-208ENST00000470076 OTORQ9NRC9 128 aa11.91□□□□□ -0.5
COL7A1-208ENST00000470076 PTTG2Q9NZH5 202 aa11.91□□□□□ -0.5
COL7A1-208ENST00000470076 SSNA1O43805 119 aa11.9□□□□□ -0.5
COL7A1-208ENST00000470076 CDPF1Q6NVV7 123 aa11.9□□□□□ -0.5
COL7A1-208ENST00000470076 ARL6IP6Q8N6S5 226 aa11.9□□□□□ -0.5
COL7A1-208ENST00000470076 SMIM3Q9BZL3 60 aa11.9□□□□□ -0.5
COL7A1-208ENST00000470076 PGPA6NDG6 321 aa11.89□□□□□ -0.51
COL7A1-208ENST00000470076 GYPEP15421 78 aa11.89□□□□□ -0.51
COL7A1-208ENST00000470076 TXNDC17Q9BRA2 123 aa11.89□□□□□ -0.51
COL7A1-208ENST00000470076 MBD2Q9UBB5 411 aa11.89□□□□□ -0.51
COL7A1-208ENST00000470076 NAGKQ9UJ70 344 aa11.89□□□□□ -0.51
COL7A1-208ENST00000470076 TNFRSF18Q9Y5U5 241 aa11.89□□□□□ -0.51
COL7A1-208ENST00000470076 TRAV4A0A0B4J268 109 aa11.88□□□□□ -0.51
COL7A1-208ENST00000470076 C9JCJ5 164 aa11.88□□□□□ -0.51
COL7A1-208ENST00000470076 EVI2AP22794 236 aa11.88□□□□□ -0.51
COL7A1-208ENST00000470076 ACOT6Q3I5F7 207 aaPredicted RBP11.88□□□□□ -0.51
COL7A1-208ENST00000470076 PQLC2Q6ZP29 291 aa11.88□□□□□ -0.51
COL7A1-208ENST00000470076 TRAV21A0A0B4J279 112 aa11.87□□□□□ -0.51
COL7A1-208ENST00000470076 A0A1W2PPV4 95 aa11.87□□□□□ -0.51
COL7A1-208ENST00000470076 M0R2P5 195 aa11.87□□□□□ -0.51
COL7A1-208ENST00000470076 DNAH10OSP0CZ25 163 aa11.87□□□□□ -0.51
COL7A1-208ENST00000470076 GOLT1AQ6ZVE7 132 aa11.87□□□□□ -0.51
COL7A1-208ENST00000470076 WFDC10BQ8IUB3 73 aa11.87□□□□□ -0.51
COL7A1-208ENST00000470076 OR4C5Q8NGB2 326 aa11.87□□□□□ -0.51
COL7A1-208ENST00000470076 MSRB1Q9NZV6 116 aa11.87□□□□□ -0.51
COL7A1-208ENST00000470076 RPH3ALQ9UNE2 315 aa11.87□□□□□ -0.51
COL7A1-208ENST00000470076 A0A087WTM6 91 aa11.86□□□□□ -0.51
COL7A1-208ENST00000470076 IGHV3-16A0A0C4DH30 117 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms