RNA–Protein interactions for RNA: ENST00000469858.5

SMC4-211, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 1,971 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-211ENST00000469858 PPP1R14DQ9NXH3 145 aa13.62□□□□□ -0.23
SMC4-211ENST00000469858 WNK1Q9H4A3 2382 aa13.62□□□□□ -0.23
SMC4-211ENST00000469858 FAM231BA6NCW3 169 aa13.62□□□□□ -0.23
SMC4-211ENST00000469858 NDUFA6P56556 154 aa13.62□□□□□ -0.23
SMC4-211ENST00000469858 RAB4BP61018 213 aa13.62□□□□□ -0.23
SMC4-211ENST00000469858 SNRPD3P62318 126 aaKnown RBP13.62□□□□□ -0.23
SMC4-211ENST00000469858 RBPMS2Q6ZRY4 209 aaKnown RBP13.62□□□□□ -0.23
SMC4-211ENST00000469858 DYNLRB2Q8TF09 96 aa13.62□□□□□ -0.23
SMC4-211ENST00000469858 FABP5P3A8MUU1 101 aa13.61□□□□□ -0.23
SMC4-211ENST00000469858 PAFAH1B2P68402 229 aa13.61□□□□□ -0.23
SMC4-211ENST00000469858 WDR73Q6P4I2 378 aa13.61□□□□□ -0.23
SMC4-211ENST00000469858 GNB1LQ9BYB4 327 aa13.61□□□□□ -0.23
SMC4-211ENST00000469858 MRPL18Q9H0U6 180 aaKnown RBP13.61□□□□□ -0.23
SMC4-211ENST00000469858 C5orf52A6NGY3 159 aa13.6□□□□□ -0.23
SMC4-211ENST00000469858 TMEM136Q6ZRR5 245 aa13.6□□□□□ -0.23
SMC4-211ENST00000469858 LENEPQ9Y5L5 61 aa13.6□□□□□ -0.23
SMC4-211ENST00000469858 J3KRW8 73 aa13.6□□□□□ -0.23
SMC4-211ENST00000469858 NSUN5P1Q3KNT7 163 aa13.6□□□□□ -0.23
SMC4-211ENST00000469858 XKRY2A2RUG3 117 aa13.59□□□□□ -0.23
SMC4-211ENST00000469858 ORM1P02763 201 aa13.59□□□□□ -0.23
SMC4-211ENST00000469858 CAMPP49913 170 aa13.59□□□□□ -0.23
SMC4-211ENST00000469858 COX19Q49B96 90 aa13.59□□□□□ -0.23
SMC4-211ENST00000469858 ATP5L2Q7Z4Y8 100 aa13.59□□□□□ -0.23
SMC4-211ENST00000469858 TMEM61Q8N0U2 210 aa13.59□□□□□ -0.23
SMC4-211ENST00000469858 TPPP3Q9BW30 176 aa13.59□□□□□ -0.23
SMC4-211ENST00000469858 F8P00451 2351 aa13.59□□□□□ -0.23
SMC4-211ENST00000469858 MT-ND6P03923 174 aa13.58□□□□□ -0.24
SMC4-211ENST00000469858 PRR9Q5T870 116 aa13.58□□□□□ -0.24
SMC4-211ENST00000469858 GDF5OSQ5U4N7 250 aa13.58□□□□□ -0.24
SMC4-211ENST00000469858 RASL11AQ6T310 242 aa13.58□□□□□ -0.24
SMC4-211ENST00000469858 ADARB2-AS1A8MUL3 147 aa13.58□□□□□ -0.24
SMC4-211ENST00000469858 CD33P20138 364 aa13.58□□□□□ -0.24
SMC4-211ENST00000469858 FOXA3P55318 350 aaPredicted RBP13.58□□□□□ -0.24
SMC4-211ENST00000469858 KRTAP10-3P60369 221 aa13.58□□□□□ -0.24
SMC4-211ENST00000469858 A0A1B0GXF2 115 aa13.57□□□□□ -0.24
SMC4-211ENST00000469858 HLA-DQA1P01909 254 aa13.57□□□□□ -0.24
SMC4-211ENST00000469858 HBBP68871 147 aa13.57□□□□□ -0.24
SMC4-211ENST00000469858 ZFAND2AQ8N6M9 145 aa13.57□□□□□ -0.24
SMC4-211ENST00000469858 BAHCC1Q9P281 2608 aa13.57□□□□□ -0.24
SMC4-211ENST00000469858 RPS20P60866 119 aaKnown RBP13.56□□□□□ -0.24
SMC4-211ENST00000469858 DEFB114Q30KQ6 69 aa13.56□□□□□ -0.24
SMC4-211ENST00000469858 SORL1Q92673 2214 aa13.56□□□□□ -0.24
SMC4-211ENST00000469858 C2CD3Q4AC94 2353 aa13.56□□□□□ -0.24
SMC4-211ENST00000469858 LINC01559Q495D7 138 aa13.56□□□□□ -0.24
SMC4-211ENST00000469858 CD300EQ496F6 205 aaPredicted RBP13.56□□□□□ -0.24
SMC4-211ENST00000469858 Q6AWC8 147 aa13.56□□□□□ -0.24
SMC4-211ENST00000469858 Q6ZQT7 251 aa13.56□□□□□ -0.24
SMC4-211ENST00000469858 FAM19A4Q96LR4 140 aa13.56□□□□□ -0.24
SMC4-211ENST00000469858 C11orf21Q9P2W6 132 aa13.56□□□□□ -0.24
SMC4-211ENST00000469858 UBE2CO00762 179 aa13.55□□□□□ -0.24
SMC4-211ENST00000469858 ARMS2P0C7Q2 107 aa13.55□□□□□ -0.24
SMC4-211ENST00000469858 AGRNO00468 2067 aa13.55□□□□□ -0.24
SMC4-211ENST00000469858 A0A0J9YX75 114 aa13.54□□□□□ -0.24
SMC4-211ENST00000469858 A0A1B0GUT8 65 aa13.54□□□□□ -0.24
SMC4-211ENST00000469858 GRIFINA4D1Z8 144 aa13.54□□□□□ -0.24
SMC4-211ENST00000469858 GPX1P07203 203 aa13.54□□□□□ -0.24
SMC4-211ENST00000469858 EBLN2Q6P2I7 272 aa13.54□□□□□ -0.24
SMC4-211ENST00000469858 SSBP4Q9BWG4 385 aaPredicted RBP13.54□□□□□ -0.24
SMC4-211ENST00000469858 IGKV3D-20A0A0C4DH25 116 aa13.54□□□□□ -0.24
SMC4-211ENST00000469858 SLAQ13239 276 aa13.54□□□□□ -0.24
SMC4-211ENST00000469858 KIAA1644Q3SXP7 199 aa13.54□□□□□ -0.24
SMC4-211ENST00000469858 PRR31Q5SQ13 230 aa13.54□□□□□ -0.24
SMC4-211ENST00000469858 LYZL1Q6UWQ5 148 aa13.54□□□□□ -0.24
SMC4-211ENST00000469858 TRAV2A0A0B4J234 112 aa13.53□□□□□ -0.24
SMC4-211ENST00000469858 IGKV3-20P01619 116 aa13.53□□□□□ -0.24
SMC4-211ENST00000469858 APCSP02743 223 aa13.53□□□□□ -0.24
SMC4-211ENST00000469858 KIR3DS1Q14943 382 aa13.53□□□□□ -0.24
SMC4-211ENST00000469858 ZNF575Q86XF7 245 aa13.53□□□□□ -0.24
SMC4-211ENST00000469858 NDUFA11Q86Y39 141 aa13.53□□□□□ -0.24
SMC4-211ENST00000469858 BORCS7Q96B45 105 aa13.53□□□□□ -0.24
SMC4-211ENST00000469858 TRBV7-9A0A0J9YWB2 115 aa13.52□□□□□ -0.24
SMC4-211ENST00000469858 CRISP2P16562 243 aa13.52□□□□□ -0.24
SMC4-211ENST00000469858 HOXA5P20719 270 aa13.52□□□□□ -0.24
SMC4-211ENST00000469858 RNASE4P34096 147 aaKnown RBP13.52□□□□□ -0.24
SMC4-211ENST00000469858 SSTP61278 116 aa13.52□□□□□ -0.24
SMC4-211ENST00000469858 RIGQ13278 110 aa13.52□□□□□ -0.24
SMC4-211ENST00000469858 GFI1BQ5VTD9 330 aa13.52□□□□□ -0.24
SMC4-211ENST00000469858 FER1L6-AS1Q8NA97 138 aa13.52□□□□□ -0.24
SMC4-211ENST00000469858 A0A1B0GUS0 222 aa13.52□□□□□ -0.25
SMC4-211ENST00000469858 DEFB131AP59861 70 aa13.52□□□□□ -0.25
SMC4-211ENST00000469858 NAGKQ9UJ70 344 aa13.52□□□□□ -0.25
SMC4-211ENST00000469858 TRAV21A0A0B4J279 112 aa13.51□□□□□ -0.25
SMC4-211ENST00000469858 MUC21A0A0G2JKD1 596 aa13.51□□□□□ -0.25
SMC4-211ENST00000469858 MUC21A0A140T8X8 626 aa13.51□□□□□ -0.25
SMC4-211ENST00000469858 IGLC6P0CF74 106 aa13.51□□□□□ -0.25
SMC4-211ENST00000469858 AKR1D1P51857 326 aa13.51□□□□□ -0.25
SMC4-211ENST00000469858 PDZD11Q5EBL8 140 aa13.51□□□□□ -0.25
SMC4-211ENST00000469858 MUC21Q5SSG8 566 aa13.51□□□□□ -0.25
SMC4-211ENST00000469858 FOXI2Q6ZQN5 318 aa13.51□□□□□ -0.25
SMC4-211ENST00000469858 APRG1Q8IVJ8 170 aa13.51□□□□□ -0.25
SMC4-211ENST00000469858 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.51□□□□□ -0.25
SMC4-211ENST00000469858 SIGLEC8Q9NYZ4 499 aa13.51□□□□□ -0.25
SMC4-211ENST00000469858 CYSRT1A8MQ03 144 aa13.51□□□□□ -0.25
SMC4-211ENST00000469858 CTRLP40313 264 aa13.5□□□□□ -0.25
SMC4-211ENST00000469858 SPAG8Q99932 426 aaPredicted RBP13.5□□□□□ -0.25
SMC4-211ENST00000469858 OR4C46A6NHA9 309 aa13.49□□□□□ -0.25
SMC4-211ENST00000469858 KLLNB2CW77 178 aa13.49□□□□□ -0.25
SMC4-211ENST00000469858 SAP30O75446 220 aa13.49□□□□□ -0.25
SMC4-211ENST00000469858 DUSP14O95147 198 aaKnown RBP13.49□□□□□ -0.25
SMC4-211ENST00000469858 TRAV25A0A0B4J276 109 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms