RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 C20orf173Q96LM9 149 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 KLK15Q9H2R5 256 aa11.23□□□□□ -0.61
CBWD3-205ENST00000469687 NPSP0C0P6 89 aa11.22□□□□□ -0.61
CBWD3-205ENST00000469687 SRSF2Q01130 221 aaKnown RBP11.22□□□□□ -0.61
CBWD3-205ENST00000469687 FOXE3Q13461 319 aa11.22□□□□□ -0.61
CBWD3-205ENST00000469687 GLMPQ8WWB7 406 aa11.22□□□□□ -0.61
CBWD3-205ENST00000469687 CNFNQ9BYD5 112 aa11.22□□□□□ -0.61
CBWD3-205ENST00000469687 ST20Q9HBF5 79 aa11.22□□□□□ -0.61
CBWD3-205ENST00000469687 SELENOKQ9Y6D0 94 aa11.22□□□□□ -0.61
CBWD3-205ENST00000469687 DLEU1O43261 78 aa11.21□□□□□ -0.61
CBWD3-205ENST00000469687 AVPP01185 164 aa11.21□□□□□ -0.61
CBWD3-205ENST00000469687 DEFB1P60022 68 aa11.21□□□□□ -0.61
CBWD3-205ENST00000469687 ACACBO00763 2458 aa11.21□□□□□ -0.61
CBWD3-205ENST00000469687 IGF1P05019 195 aa11.21□□□□□ -0.62
CBWD3-205ENST00000469687 GATA1P15976 413 aaPredicted RBP11.21□□□□□ -0.62
CBWD3-205ENST00000469687 TMEM78Q5T7P6 136 aa11.21□□□□□ -0.62
CBWD3-205ENST00000469687 GPHB5Q86YW7 130 aa11.21□□□□□ -0.62
CBWD3-205ENST00000469687 C16orf92Q96LL3 132 aa11.21□□□□□ -0.62
CBWD3-205ENST00000469687 PRR9Q5T870 116 aa11.2□□□□□ -0.62
CBWD3-205ENST00000469687 SCRT2Q9NQ03 307 aa11.2□□□□□ -0.62
CBWD3-205ENST00000469687 MYO18BQ8IUG5 2567 aa11.2□□□□□ -0.62
CBWD3-205ENST00000469687 ZANQ9Y493 2812 aa11.2□□□□□ -0.62
CBWD3-205ENST00000469687 A6NDX4 124 aa11.2□□□□□ -0.62
CBWD3-205ENST00000469687 CYB5R2Q6BCY4 276 aa11.2□□□□□ -0.62
CBWD3-205ENST00000469687 HSBP1L1C9JCN9 74 aa11.19□□□□□ -0.62
CBWD3-205ENST00000469687 J3KRW8 73 aa11.19□□□□□ -0.62
CBWD3-205ENST00000469687 IGHG2P01859 326 aa11.19□□□□□ -0.62
CBWD3-205ENST00000469687 MSMBP08118 114 aa11.19□□□□□ -0.62
CBWD3-205ENST00000469687 EVI2AP22794 236 aa11.19□□□□□ -0.62
CBWD3-205ENST00000469687 C9orf47Q6ZRZ4 202 aa11.19□□□□□ -0.62
CBWD3-205ENST00000469687 WFDC3Q8IUB2 231 aa11.19□□□□□ -0.62
CBWD3-205ENST00000469687 FBN2P35556 2912 aa11.19□□□□□ -0.62
CBWD3-205ENST00000469687 IGHV7-4-1A0A0J9YVY3 117 aa11.18□□□□□ -0.62
CBWD3-205ENST00000469687 NDUFS8O00217 210 aa11.18□□□□□ -0.62
CBWD3-205ENST00000469687 MRPL53Q96EL3 112 aaKnown RBP11.18□□□□□ -0.62
CBWD3-205ENST00000469687 PF4V1P10720 104 aa11.18□□□□□ -0.62
CBWD3-205ENST00000469687 HIST1H1AQ02539 215 aaPredicted RBP11.18□□□□□ -0.62
CBWD3-205ENST00000469687 ZNF738Q8NE65 137 aa11.18□□□□□ -0.62
CBWD3-205ENST00000469687 HIF1ANQ9NWT6 349 aa11.18□□□□□ -0.62
CBWD3-205ENST00000469687 IGKV3-7A0A075B6H7 116 aa11.17□□□□□ -0.62
CBWD3-205ENST00000469687 TCF21O43680 179 aa11.17□□□□□ -0.62
CBWD3-205ENST00000469687 HBDP02042 147 aa11.17□□□□□ -0.62
CBWD3-205ENST00000469687 MPV17L2Q567V2 206 aa11.17□□□□□ -0.62
CBWD3-205ENST00000469687 SLC25A34Q6PIV7 304 aa11.17□□□□□ -0.62
CBWD3-205ENST00000469687 TCTAP57738 103 aa11.17□□□□□ -0.62
CBWD3-205ENST00000469687 TMEM95Q3KNT9 176 aa11.17□□□□□ -0.62
CBWD3-205ENST00000469687 ATP6V0BQ99437 205 aa11.17□□□□□ -0.62
CBWD3-205ENST00000469687 POLQO75417 2590 aa11.17□□□□□ -0.62
CBWD3-205ENST00000469687 ZFYVE26Q68DK2 2539 aa11.17□□□□□ -0.62
CBWD3-205ENST00000469687 NDUFA4O00483 81 aa11.16□□□□□ -0.62
CBWD3-205ENST00000469687 SNAI2O43623 268 aa11.16□□□□□ -0.62
CBWD3-205ENST00000469687 EDN2P20800 178 aa11.16□□□□□ -0.62
CBWD3-205ENST00000469687 CACNG7P62955 275 aa11.16□□□□□ -0.62
CBWD3-205ENST00000469687 ZNF124Q15973 351 aa11.16□□□□□ -0.62
CBWD3-205ENST00000469687 GOLT1BQ9Y3E0 138 aa11.16□□□□□ -0.62
CBWD3-205ENST00000469687 USP9YO00507 2555 aaPredicted RBP11.16□□□□□ -0.62
CBWD3-205ENST00000469687 SOCS3O14543 225 aa11.16□□□□□ -0.62
CBWD3-205ENST00000469687 SPRY2O43597 315 aa11.16□□□□□ -0.62
CBWD3-205ENST00000469687 TNFRSF6BO95407 300 aa11.16□□□□□ -0.62
CBWD3-205ENST00000469687 C9orf139Q6ZV77 190 aa11.16□□□□□ -0.62
CBWD3-205ENST00000469687 OR4X2Q8NGF9 303 aa11.16□□□□□ -0.62
CBWD3-205ENST00000469687 C18orf15Q96N68 181 aa11.16□□□□□ -0.62
CBWD3-205ENST00000469687 MAP1LC3AQ9H492 121 aa11.16□□□□□ -0.62
CBWD3-205ENST00000469687 ANKRD17O75179 2603 aaKnown RBP11.15□□□□□ -0.62
CBWD3-205ENST00000469687 CENPEQ02224 2701 aa11.15□□□□□ -0.62
CBWD3-205ENST00000469687 TRAV26-2A0A0B4J265 109 aa11.15□□□□□ -0.62
CBWD3-205ENST00000469687 GAGE1Q13065 139 aa11.15□□□□□ -0.62
CBWD3-205ENST00000469687 DOPEY2Q9Y3R5 2298 aa11.14□□□□□ -0.63
CBWD3-205ENST00000469687 F6UB75 175 aa11.14□□□□□ -0.63
CBWD3-205ENST00000469687 RPL11P62913 178 aaKnown RBP11.14□□□□□ -0.63
CBWD3-205ENST00000469687 TM4SF20Q53R12 229 aa11.14□□□□□ -0.63
CBWD3-205ENST00000469687 ANKRD39Q53RE8 183 aa11.14□□□□□ -0.63
CBWD3-205ENST00000469687 IFI27L1Q96BM0 104 aa11.14□□□□□ -0.63
CBWD3-205ENST00000469687 MS4A6AQ9H2W1 248 aa11.14□□□□□ -0.63
CBWD3-205ENST00000469687 H3BVH4 76 aa11.14□□□□□ -0.63
CBWD3-205ENST00000469687 NUDT3O95989 172 aa11.14□□□□□ -0.63
CBWD3-205ENST00000469687 KIR3DS1Q14943 382 aa11.14□□□□□ -0.63
CBWD3-205ENST00000469687 USMG5Q96IX5 58 aa11.14□□□□□ -0.63
CBWD3-205ENST00000469687 NPFFR1Q9GZQ6 430 aa11.14□□□□□ -0.63
CBWD3-205ENST00000469687 UFC1Q9Y3C8 167 aa11.14□□□□□ -0.63
CBWD3-205ENST00000469687 IGLV1-40P01703 118 aa11.13□□□□□ -0.63
CBWD3-205ENST00000469687 PPBPP02775 128 aa11.13□□□□□ -0.63
CBWD3-205ENST00000469687 SRD5A1P18405 259 aa11.13□□□□□ -0.63
CBWD3-205ENST00000469687 ZFAND2AQ8N6M9 145 aa11.13□□□□□ -0.63
CBWD3-205ENST00000469687 PPP1R14DQ9NXH3 145 aa11.13□□□□□ -0.63
CBWD3-205ENST00000469687 FAM208BQ5VWN6 2430 aa11.13□□□□□ -0.63
CBWD3-205ENST00000469687 PRB1P04280 392 aa11.13□□□□□ -0.63
CBWD3-205ENST00000469687 LGALS9BQ3B8N2 356 aa11.13□□□□□ -0.63
CBWD3-205ENST00000469687 LGALS9CQ6DKI2 356 aa11.13□□□□□ -0.63
CBWD3-205ENST00000469687 MAPK1IP1LQ8NDC0 245 aa11.13□□□□□ -0.63
CBWD3-205ENST00000469687 SPOCK3Q9BQ16 436 aa11.13□□□□□ -0.63
CBWD3-205ENST00000469687 B4DSR2 109 aa11.12□□□□□ -0.63
CBWD3-205ENST00000469687 H3BUA1 57 aa11.12□□□□□ -0.63
CBWD3-205ENST00000469687 COX8AP10176 69 aa11.12□□□□□ -0.63
CBWD3-205ENST00000469687 LEPP41159 167 aa11.12□□□□□ -0.63
CBWD3-205ENST00000469687 BVES-AS1Q5T3Y7 98 aa11.12□□□□□ -0.63
CBWD3-205ENST00000469687 C10orf99Q6UWK7 81 aa11.12□□□□□ -0.63
CBWD3-205ENST00000469687 DKK2Q9UBU2 259 aa11.12□□□□□ -0.63
CBWD3-205ENST00000469687 CFHR3Q02985 330 aa11.11□□□□□ -0.63
CBWD3-205ENST00000469687 SPANXN1Q5VSR9 72 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms