RNA–Protein interactions for RNA: ENST00000469529.6

TRAF4-208, Transcript of TNF receptor associated factor 4, humanhuman

TSL 2

Gene TRAF4, Length 788 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-208ENST00000469529 FAM231BA6NCW3 169 aa9.42□□□□□ -0.9
TRAF4-208ENST00000469529 PFN1P07737 140 aaKnown RBP9.42□□□□□ -0.9
TRAF4-208ENST00000469529 ZNF705DP0CH99 300 aaPredicted RBP9.42□□□□□ -0.9
TRAF4-208ENST00000469529 ZNF705BP0CI00 300 aaPredicted RBP9.42□□□□□ -0.9
TRAF4-208ENST00000469529 MGST1P10620 155 aaKnown RBP9.42□□□□□ -0.9
TRAF4-208ENST00000469529 IGLL1P15814 213 aa9.42□□□□□ -0.9
TRAF4-208ENST00000469529 LEPP41159 167 aa9.42□□□□□ -0.9
TRAF4-208ENST00000469529 DEFB1P60022 68 aa9.42□□□□□ -0.9
TRAF4-208ENST00000469529 EGFEM1PQ0D2K5 195 aa9.42□□□□□ -0.9
TRAF4-208ENST00000469529 IBA57Q5T440 356 aaKnown RBP9.42□□□□□ -0.9
TRAF4-208ENST00000469529 FAM162BQ5T6X4 162 aa9.42□□□□□ -0.9
TRAF4-208ENST00000469529 Q6AWC8 147 aa9.42□□□□□ -0.9
TRAF4-208ENST00000469529 LINC00322Q6ZN03 302 aaPredicted RBP9.42□□□□□ -0.9
TRAF4-208ENST00000469529 Q8TAT8 98 aa9.42□□□□□ -0.9
TRAF4-208ENST00000469529 C8orf49Q96NF6 230 aa9.42□□□□□ -0.9
TRAF4-208ENST00000469529 AURKAIP1Q9NWT8 199 aaPredicted RBP9.42□□□□□ -0.9
TRAF4-208ENST00000469529 V9GYV3 84 aa9.42□□□□□ -0.9
TRAF4-208ENST00000469529 AMBPP02760 352 aa9.41□□□□□ -0.9
TRAF4-208ENST00000469529 FOXA3P55318 350 aaPredicted RBP9.41□□□□□ -0.9
TRAF4-208ENST00000469529 TRPT1Q86TN4 253 aaKnown RBP9.41□□□□□ -0.9
TRAF4-208ENST00000469529 NHLRC2Q8NBF2 726 aa9.41□□□□□ -0.9
TRAF4-208ENST00000469529 DAZAP1Q96EP5 407 aaKnown RBP9.41□□□□□ -0.9
TRAF4-208ENST00000469529 SMCO4Q9NRQ5 59 aa9.41□□□□□ -0.9
TRAF4-208ENST00000469529 TRRAPQ9Y4A5 3859 aa9.41□□□□□ -0.9
TRAF4-208ENST00000469529 KNCNA6PVL3 124 aa9.4□□□□□ -0.9
TRAF4-208ENST00000469529 H7BYZ3 331 aa9.4□□□□□ -0.9
TRAF4-208ENST00000469529 GATCO43716 136 aaKnown RBP9.4□□□□□ -0.9
TRAF4-208ENST00000469529 P01737 135 aa9.4□□□□□ -0.9
TRAF4-208ENST00000469529 GPX1P07203 203 aa9.4□□□□□ -0.9
TRAF4-208ENST00000469529 CD7P09564 240 aa9.4□□□□□ -0.9
TRAF4-208ENST00000469529 CDKN1BP46527 198 aa9.4□□□□□ -0.9
TRAF4-208ENST00000469529 ZNF80P51504 273 aaPredicted RBP9.4□□□□□ -0.9
TRAF4-208ENST00000469529 ACTL10Q5JWF8 245 aa9.4□□□□□ -0.9
TRAF4-208ENST00000469529 Q8N1Y9 231 aa9.4□□□□□ -0.9
TRAF4-208ENST00000469529 C20orf144Q9BQM9 153 aa9.4□□□□□ -0.9
TRAF4-208ENST00000469529 GFRA4Q9GZZ7 299 aa9.4□□□□□ -0.9
TRAF4-208ENST00000469529 RNASE7Q9H1E1 156 aaKnown RBP9.4□□□□□ -0.9
TRAF4-208ENST00000469529 TRAV9-1A0A075B6T8 112 aa9.39□□□□□ -0.91
TRAF4-208ENST00000469529 TRAV21A0A0B4J279 112 aa9.39□□□□□ -0.91
TRAF4-208ENST00000469529 A8MWL6 223 aa9.39□□□□□ -0.91
TRAF4-208ENST00000469529 ZNF324O75467 553 aaPredicted RBP9.39□□□□□ -0.91
TRAF4-208ENST00000469529 CXCL1P09341 107 aa9.39□□□□□ -0.91
TRAF4-208ENST00000469529 PRB4P10163 310 aaPredicted RBP9.39□□□□□ -0.91
TRAF4-208ENST00000469529 RPS20P60866 119 aaKnown RBP9.39□□□□□ -0.91
TRAF4-208ENST00000469529 LINC01559Q495D7 138 aa9.39□□□□□ -0.91
TRAF4-208ENST00000469529 GTSCR1Q86UQ5 136 aa9.39□□□□□ -0.91
TRAF4-208ENST00000469529 ZNF575Q86XF7 245 aa9.39□□□□□ -0.91
TRAF4-208ENST00000469529 YPEL4Q96NS1 127 aa9.39□□□□□ -0.91
TRAF4-208ENST00000469529 PYGO2Q9BRQ0 406 aa9.39□□□□□ -0.91
TRAF4-208ENST00000469529 NOTCH3Q9UM47 2321 aa9.38□□□□□ -0.91
TRAF4-208ENST00000469529 SORL1Q92673 2214 aa9.38□□□□□ -0.91
TRAF4-208ENST00000469529 SMIM27A0A1W2PRY6 76 aa9.38□□□□□ -0.91
TRAF4-208ENST00000469529 ZNF705GA8MUZ8 300 aaPredicted RBP9.38□□□□□ -0.91
TRAF4-208ENST00000469529 SH2D1AO60880 128 aa9.38□□□□□ -0.91
TRAF4-208ENST00000469529 NUTF2P61970 127 aaKnown RBP9.38□□□□□ -0.91
TRAF4-208ENST00000469529 DEFA6Q01524 100 aa9.38□□□□□ -0.91
TRAF4-208ENST00000469529 TDRG1Q3Y452 100 aa9.38□□□□□ -0.91
TRAF4-208ENST00000469529 DNLZQ5SXM8 178 aa9.38□□□□□ -0.91
TRAF4-208ENST00000469529 PRR27Q6MZM9 219 aa9.38□□□□□ -0.91
TRAF4-208ENST00000469529 MORN3Q6PF18 240 aaPredicted RBP9.38□□□□□ -0.91
TRAF4-208ENST00000469529 STHQ8IWL8 128 aa9.38□□□□□ -0.91
TRAF4-208ENST00000469529 TSKUQ8WUA8 353 aa9.38□□□□□ -0.91
TRAF4-208ENST00000469529 BTF3L4Q96K17 158 aa9.38□□□□□ -0.91
TRAF4-208ENST00000469529 RPP21Q9H633 154 aaKnown RBP9.38□□□□□ -0.91
TRAF4-208ENST00000469529 IL36BQ9NZH7 164 aa9.38□□□□□ -0.91
TRAF4-208ENST00000469529 TRBV24-1A0A075B6N3 115 aa9.37□□□□□ -0.91
TRAF4-208ENST00000469529 XKRY2A2RUG3 117 aa9.37□□□□□ -0.91
TRAF4-208ENST00000469529 C7orf71A4D174 169 aa9.37□□□□□ -0.91
TRAF4-208ENST00000469529 RBMY1BA6NDE4 496 aaKnown RBP9.37□□□□□ -0.91
TRAF4-208ENST00000469529 RBMY1EA6NEQ0 496 aaKnown RBP9.37□□□□□ -0.91
TRAF4-208ENST00000469529 A8MZ25 164 aa9.37□□□□□ -0.91
TRAF4-208ENST00000469529 CRXO43186 299 aaPredicted RBP9.37□□□□□ -0.91
TRAF4-208ENST00000469529 RBMY1DP0C7P1 496 aaKnown RBP9.37□□□□□ -0.91
TRAF4-208ENST00000469529 ZNF124Q15973 351 aa9.37□□□□□ -0.91
TRAF4-208ENST00000469529 LINC00467Q9BRT7 94 aa9.37□□□□□ -0.91
TRAF4-208ENST00000469529 MEGF8Q7Z7M0 2845 aa9.37□□□□□ -0.91
TRAF4-208ENST00000469529 TMEM189A5PLL7 270 aa9.36□□□□□ -0.91
TRAF4-208ENST00000469529 RNASE4P34096 147 aaKnown RBP9.36□□□□□ -0.91
TRAF4-208ENST00000469529 PRR9Q5T870 116 aa9.36□□□□□ -0.91
TRAF4-208ENST00000469529 SAMD5Q5TGI4 173 aa9.36□□□□□ -0.91
TRAF4-208ENST00000469529 OR2D3Q8NGH3 330 aa9.36□□□□□ -0.91
TRAF4-208ENST00000469529 IGKV3D-20A0A0C4DH25 116 aa9.35□□□□□ -0.91
TRAF4-208ENST00000469529 A0A1W2PPQ1 181 aa9.35□□□□□ -0.91
TRAF4-208ENST00000469529 SCO1O75880 301 aa9.35□□□□□ -0.91
TRAF4-208ENST00000469529 S100PP25815 95 aa9.35□□□□□ -0.91
TRAF4-208ENST00000469529 BTN1A1Q13410 526 aa9.35□□□□□ -0.91
TRAF4-208ENST00000469529 OXLD1Q5BKU9 147 aa9.35□□□□□ -0.91
TRAF4-208ENST00000469529 GFI1BQ5VTD9 330 aa9.35□□□□□ -0.91
TRAF4-208ENST00000469529 KCNIP4Q6PIL6 250 aa9.35□□□□□ -0.91
TRAF4-208ENST00000469529 KCNS1Q96KK3 526 aa9.35□□□□□ -0.91
TRAF4-208ENST00000469529 SSBP4Q9BWG4 385 aaPredicted RBP9.35□□□□□ -0.91
TRAF4-208ENST00000469529 C1QTNF4Q9BXJ3 329 aa9.35□□□□□ -0.91
TRAF4-208ENST00000469529 C11orf21Q9P2W6 132 aa9.35□□□□□ -0.91
TRAF4-208ENST00000469529 TP53TG3Q9ULZ0 132 aa9.35□□□□□ -0.91
TRAF4-208ENST00000469529 KIR2DL5BA0A0G2JN68 375 aa9.34□□□□□ -0.91
TRAF4-208ENST00000469529 KIR2DL5BA0A0G2JPC4 375 aa9.34□□□□□ -0.91
TRAF4-208ENST00000469529 COLCA2A8K830 154 aa9.34□□□□□ -0.91
TRAF4-208ENST00000469529 GIG44P09565 113 aaPredicted RBP9.34□□□□□ -0.91
TRAF4-208ENST00000469529 KIR3DS1Q14943 382 aa9.34□□□□□ -0.91
TRAF4-208ENST00000469529 ELOBQ15370 118 aa9.34□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms