RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 C17orf77Q96MU5 243 aa7□□□□□ -1.29
SMARCE1-207ENST00000469334 SCGB3A1Q96QR1 104 aa7□□□□□ -1.29
SMARCE1-207ENST00000469334 MSRB1Q9NZV6 116 aa7□□□□□ -1.29
SMARCE1-207ENST00000469334 M0R3E3 92 aa7□□□□□ -1.29
SMARCE1-207ENST00000469334 ZNF672Q499Z4 452 aaPredicted RBP7□□□□□ -1.29
SMARCE1-207ENST00000469334 Q6ZT83 130 aa7□□□□□ -1.29
SMARCE1-207ENST00000469334 BAALCQ8WXS3 180 aa7□□□□□ -1.29
SMARCE1-207ENST00000469334 GAFA1Q96PS6 74 aa7□□□□□ -1.29
SMARCE1-207ENST00000469334 VKORC1Q9BQB6 163 aa7□□□□□ -1.29
SMARCE1-207ENST00000469334 SMIM2Q9BVW6 85 aa7□□□□□ -1.29
SMARCE1-207ENST00000469334 DKK4Q9UBT3 224 aa7□□□□□ -1.29
SMARCE1-207ENST00000469334 DNAH14Q0VDD8 3507 aa6.99□□□□□ -1.29
SMARCE1-207ENST00000469334 LYZL6O75951 148 aa6.99□□□□□ -1.29
SMARCE1-207ENST00000469334 NDUFA7O95182 113 aa6.99□□□□□ -1.29
SMARCE1-207ENST00000469334 GATA1P15976 413 aaPredicted RBP6.99□□□□□ -1.29
SMARCE1-207ENST00000469334 GATA4P43694 442 aa6.99□□□□□ -1.29
SMARCE1-207ENST00000469334 EFNA4P52798 201 aa6.99□□□□□ -1.29
SMARCE1-207ENST00000469334 RPS28P62857 69 aaKnown RBP6.99□□□□□ -1.29
SMARCE1-207ENST00000469334 ERCC8Q13216 396 aa6.99□□□□□ -1.29
SMARCE1-207ENST00000469334 MRGPRG-AS1Q2M3A8 158 aa6.99□□□□□ -1.29
SMARCE1-207ENST00000469334 SLC25A29Q8N8R3 303 aa6.99□□□□□ -1.29
SMARCE1-207ENST00000469334 OR13C6PQ8NH95 151 aa6.99□□□□□ -1.29
SMARCE1-207ENST00000469334 H3BT86 120 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 I3L2K1 104 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 IGKV1-17P01599 117 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 IGLV1-44P01699 117 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 IGHV3-33P01772 117 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 ORM1P02763 201 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 CECR9P0C854 216 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 TMEM155Q4W5P6 130 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 DEFB121Q5J5C9 76 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 TMEM170BQ5T4T1 132 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 C3orf22Q8N5N4 141 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 RNF125Q96EQ8 232 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 RNF7Q9UBF6 113 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 UQCRQO14949 82 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 LINC00694P0DN24 101 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 C9orf153Q5TBE3 101 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 ZNF575Q86XF7 245 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 ZNRD1Q9P1U0 126 aa6.98□□□□□ -1.29
SMARCE1-207ENST00000469334 C5orf42Q9H799 3197 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 IGHV4-4A0A075B6R2 117 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 IGKV2-40A0A087WW87 121 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 NPFFO15130 113 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 TGFAP01135 160 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 IGKV2D-40P01614 121 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 CD59P13987 128 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 ZNF80P51504 273 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 ZNF491Q8N8L2 437 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 SLC50A1Q9BRV3 221 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 CHCHD5Q9BSY4 110 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 TPSG1Q9NRR2 321 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 IGHV3-21A0A0B4J1V1 117 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 PF4V1P10720 104 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 CRIP2P52943 208 aaPredicted RBP6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 EBI3Q14213 229 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 FAM201AQ5SY85 155 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 TMEM263Q8WUH6 116 aaKnown RBP6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 LINC00526Q96FQ7 95 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 CHD7Q9P2D1 2997 aa6.97□□□□□ -1.29
SMARCE1-207ENST00000469334 DNAJC13O75165 2243 aa6.96□□□□□ -1.29
SMARCE1-207ENST00000469334 XIRP2A4UGR9 3374 aa6.96□□□□□ -1.3
SMARCE1-207ENST00000469334 INTS1Q8N201 2190 aaKnown RBP6.96□□□□□ -1.3
SMARCE1-207ENST00000469334 TRBV30A0A0K0K1B3 111 aa6.96□□□□□ -1.3
SMARCE1-207ENST00000469334 TEX49A0A1B0GTD5 131 aa6.96□□□□□ -1.3
SMARCE1-207ENST00000469334 ACYP1P07311 99 aa6.96□□□□□ -1.3
SMARCE1-207ENST00000469334 CRYGBP07316 175 aa6.96□□□□□ -1.3
SMARCE1-207ENST00000469334 RPL7P18124 248 aaKnown RBP6.96□□□□□ -1.3
SMARCE1-207ENST00000469334 ADIPOQQ15848 244 aa6.96□□□□□ -1.3
SMARCE1-207ENST00000469334 TRPT1Q86TN4 253 aaKnown RBP6.96□□□□□ -1.3
SMARCE1-207ENST00000469334 TMEM219Q86XT9 240 aa6.96□□□□□ -1.3
SMARCE1-207ENST00000469334 VCANP13611 3396 aa6.96□□□□□ -1.3
SMARCE1-207ENST00000469334 TEX22C9J3V5 150 aa6.95□□□□□ -1.3
SMARCE1-207ENST00000469334 DUX4L9Q6RFH8 374 aaPredicted RBP6.95□□□□□ -1.3
SMARCE1-207ENST00000469334 HES7Q9BYE0 225 aa6.95□□□□□ -1.3
SMARCE1-207ENST00000469334 CACNA1AO00555 2505 aa6.95□□□□□ -1.3
SMARCE1-207ENST00000469334 EYSQ5T1H1 3165 aa6.95□□□□□ -1.3
SMARCE1-207ENST00000469334 IGHV1-69DA0A0B4J2H0 117 aa6.95□□□□□ -1.3
SMARCE1-207ENST00000469334 RBAKDNA6NC62 111 aa6.95□□□□□ -1.3
SMARCE1-207ENST00000469334 TEX36Q5VZQ5 186 aa6.95□□□□□ -1.3
SMARCE1-207ENST00000469334 IGHV1-18A0A0C4DH31 117 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 C11orf86A6NJI1 115 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 TRGV3P03979 118 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 CD3EP07766 207 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 CCL4P13236 92 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 GLRXP35754 106 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 HERVK_113P63121 156 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 TNFAIP6P98066 277 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 ZNF56Q15929 161 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 C2orf82Q6UX34 121 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 C2orf66Q6UXQ4 117 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 FAM19A5Q7Z5A7 132 aaPredicted RBP6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 C1orf210Q8IVY1 113 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 FAM216BQ8N7L0 139 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 POM121L12Q8N7R1 296 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 CCL13Q99616 98 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 UBTD1Q9HAC8 227 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 TRIOBPQ9H2D6 2365 aa6.94□□□□□ -1.3
SMARCE1-207ENST00000469334 FAM236AA0A1B0GUQ0 79 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 66.2 ms