RNA–Protein interactions for RNA: ENST00000469300.6

LIMS2-213, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 4,807 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-213ENST00000469300 CD300EQ496F6 205 aaPredicted RBP11.93□□□□□ -0.5
LIMS2-213ENST00000469300 HIVEP2P31629 2446 aa11.93□□□□□ -0.5
LIMS2-213ENST00000469300 LGALS1P09382 135 aaKnown RBP11.93□□□□□ -0.5
LIMS2-213ENST00000469300 ERCC8Q13216 396 aa11.93□□□□□ -0.5
LIMS2-213ENST00000469300 IL15RAQ13261 267 aa11.93□□□□□ -0.5
LIMS2-213ENST00000469300 MORN3Q6PF18 240 aaPredicted RBP11.93□□□□□ -0.5
LIMS2-213ENST00000469300 COL4A3Q01955 1670 aa11.93□□□□□ -0.5
LIMS2-213ENST00000469300 KLF12Q9Y4X4 402 aa11.93□□□□□ -0.5
LIMS2-213ENST00000469300 NCOR2Q9Y618 2525 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 PIEZO2Q9H5I5 2752 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 PRR20EP86478 221 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 PRR20CP86479 221 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 PRR20DP86480 221 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 PRR20BP86481 221 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 PRR20AP86496 221 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 SPRNQ5BIV9 151 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 C9orf153Q5TBE3 101 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 ZNF491Q8N8L2 437 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 IGHV1OR15-1A0A075B7D0 117 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 NCR2O95944 276 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 ZNF114Q8NC26 417 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 XCL2Q9UBD3 114 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 C9orf118A6NHY6 69 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 TNFRSF6BO95407 300 aa11.92□□□□□ -0.5
LIMS2-213ENST00000469300 TRPT1Q86TN4 253 aaKnown RBP11.92□□□□□ -0.5
LIMS2-213ENST00000469300 PCNX3Q9H6A9 2034 aa11.91□□□□□ -0.5
LIMS2-213ENST00000469300 GAGE12HA6NDE8 117 aa11.91□□□□□ -0.5
LIMS2-213ENST00000469300 FAM231DQ6ZW35 169 aa11.91□□□□□ -0.5
LIMS2-213ENST00000469300 TMEM86BQ8N661 226 aa11.91□□□□□ -0.5
LIMS2-213ENST00000469300 ZNF106Q9H2Y7 1883 aaKnown RBP11.91□□□□□ -0.5
LIMS2-213ENST00000469300 TEX43Q6ZNM6 134 aa11.91□□□□□ -0.5
LIMS2-213ENST00000469300 PRR25Q96S07 402 aa11.91□□□□□ -0.5
LIMS2-213ENST00000469300 EDA2RQ9HAV5 297 aa11.91□□□□□ -0.5
LIMS2-213ENST00000469300 CSPG4Q6UVK1 2322 aa11.91□□□□□ -0.5
LIMS2-213ENST00000469300 SPINK13Q1W4C9 94 aa11.91□□□□□ -0.5
LIMS2-213ENST00000469300 MRPL53Q96EL3 112 aaKnown RBP11.91□□□□□ -0.5
LIMS2-213ENST00000469300 LINC00479Q96M42 142 aa11.9□□□□□ -0.5
LIMS2-213ENST00000469300 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.9□□□□□ -0.5
LIMS2-213ENST00000469300 TRBV7-9A0A0J9YWB2 115 aa11.9□□□□□ -0.5
LIMS2-213ENST00000469300 ETDBQ3ZM63 59 aa11.9□□□□□ -0.5
LIMS2-213ENST00000469300 PLEKHB2Q96CS7 222 aa11.9□□□□□ -0.5
LIMS2-213ENST00000469300 TRAV2A0A0B4J234 112 aa11.9□□□□□ -0.5
LIMS2-213ENST00000469300 AZU1P20160 251 aa11.9□□□□□ -0.5
LIMS2-213ENST00000469300 CSTL1Q9H114 145 aa11.9□□□□□ -0.5
LIMS2-213ENST00000469300 LENEPQ9Y5L5 61 aa11.9□□□□□ -0.5
LIMS2-213ENST00000469300 PRSS46E5RG02 174 aa11.9□□□□□ -0.51
LIMS2-213ENST00000469300 Q71RC1 249 aaPredicted RBP11.9□□□□□ -0.51
LIMS2-213ENST00000469300 TMEM131Q92545 1883 aa11.9□□□□□ -0.51
LIMS2-213ENST00000469300 IGHV3-53P01767 116 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 DEFB130BP0DP73 79 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 DEFB130AP0DP74 79 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 F8W1H4 67 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 HAPLN4Q86UW8 402 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 LRRC75A-AS1Q8N1F1 130 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 STPG4Q8N801 248 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 C11orf52Q96A22 123 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 IGHV7-81A0A0B4J1V7 117 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 IGLV1-47P01700 117 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 IGHV4-38-2P0DP08 117 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 IGHV3-73A0A0B4J1V6 119 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 K7EP34 96 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 PGPEP1Q9NXJ5 209 aa11.89□□□□□ -0.51
LIMS2-213ENST00000469300 PTPN13Q12923 2485 aa11.88□□□□□ -0.51
LIMS2-213ENST00000469300 DAD1P61803 113 aa11.88□□□□□ -0.51
LIMS2-213ENST00000469300 C2orf82Q6UX34 121 aa11.88□□□□□ -0.51
LIMS2-213ENST00000469300 RASL10AQ92737 203 aa11.88□□□□□ -0.51
LIMS2-213ENST00000469300 SPXQ9BT56 116 aa11.88□□□□□ -0.51
LIMS2-213ENST00000469300 TMEM89A2RUT3 159 aa11.88□□□□□ -0.51
LIMS2-213ENST00000469300 GGTLC3B5MD39 225 aa11.88□□□□□ -0.51
LIMS2-213ENST00000469300 SRSF2Q01130 221 aaKnown RBP11.88□□□□□ -0.51
LIMS2-213ENST00000469300 SPANXDQ9BXN6 97 aa11.88□□□□□ -0.51
LIMS2-213ENST00000469300 VWC2Q2TAL6 325 aa11.88□□□□□ -0.51
LIMS2-213ENST00000469300 IGFBPL1Q8WX77 278 aa11.88□□□□□ -0.51
LIMS2-213ENST00000469300 CCL24O00175 119 aa11.88□□□□□ -0.51
LIMS2-213ENST00000469300 FSTL3O95633 263 aa11.88□□□□□ -0.51
LIMS2-213ENST00000469300 PPDPFLQ8WWR9 84 aa11.88□□□□□ -0.51
LIMS2-213ENST00000469300 HOXD3P31249 432 aaPredicted RBP11.87□□□□□ -0.51
LIMS2-213ENST00000469300 FOXI2Q6ZQN5 318 aa11.87□□□□□ -0.51
LIMS2-213ENST00000469300 CHAC1Q9BUX1 264 aa11.87□□□□□ -0.51
LIMS2-213ENST00000469300 AMN1Q8IY45 258 aa11.87□□□□□ -0.51
LIMS2-213ENST00000469300 LSM4Q9Y4Z0 139 aaKnown RBP11.87□□□□□ -0.51
LIMS2-213ENST00000469300 LOXL1Q08397 574 aaPredicted RBP11.87□□□□□ -0.51
LIMS2-213ENST00000469300 Q6ZWC4 215 aa11.86□□□□□ -0.51
LIMS2-213ENST00000469300 FXYD5Q96DB9 178 aa11.86□□□□□ -0.51
LIMS2-213ENST00000469300 IGKV3D-20A0A0C4DH25 116 aa11.86□□□□□ -0.51
LIMS2-213ENST00000469300 GAGE12JA6NER3 117 aa11.86□□□□□ -0.51
LIMS2-213ENST00000469300 SLC25A20O43772 301 aa11.86□□□□□ -0.51
LIMS2-213ENST00000469300 GAGE7O76087 117 aa11.86□□□□□ -0.51
LIMS2-213ENST00000469300 GAGE12FP0CL80 117 aa11.86□□□□□ -0.51
LIMS2-213ENST00000469300 GAGE12GP0CL81 117 aa11.86□□□□□ -0.51
LIMS2-213ENST00000469300 GAGE12IP0CL82 117 aa11.86□□□□□ -0.51
LIMS2-213ENST00000469300 GAGE4Q13068 117 aa11.86□□□□□ -0.51
LIMS2-213ENST00000469300 WISP2O76076 250 aa11.86□□□□□ -0.51
LIMS2-213ENST00000469300 ZC2HC1BQ5TFG8 222 aa11.86□□□□□ -0.51
LIMS2-213ENST00000469300 A0A087WWL8 130 aa11.85□□□□□ -0.51
LIMS2-213ENST00000469300 M0R2P5 195 aa11.85□□□□□ -0.51
LIMS2-213ENST00000469300 ZNF726P1Q15940 193 aa11.85□□□□□ -0.51
LIMS2-213ENST00000469300 IGLV11-55A0A075B6I3 123 aa11.85□□□□□ -0.51
LIMS2-213ENST00000469300 INS-IGF2F8WCM5 200 aa11.85□□□□□ -0.51
LIMS2-213ENST00000469300 GAGE5Q13069 117 aa11.85□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms