RNA–Protein interactions for RNA: ENST00000468770.1

SNRPD3-205, Transcript of small nuclear ribonucleoprotein D3 polypeptide, humanhuman

TSL 1 (best)

Gene SNRPD3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPD3-205ENST00000468770 MED28Q9H204 178 aa5□□□□□ -1.61
SNRPD3-205ENST00000468770 Q9H8V8 135 aa5□□□□□ -1.61
SNRPD3-205ENST00000468770 OTORQ9NRC9 128 aa5□□□□□ -1.61
SNRPD3-205ENST00000468770 TP53TG3Q9ULZ0 132 aa5□□□□□ -1.61
SNRPD3-205ENST00000468770 PTTG1O95997 202 aa4.99□□□□□ -1.61
SNRPD3-205ENST00000468770 RAB2AP61019 212 aa4.99□□□□□ -1.61
SNRPD3-205ENST00000468770 ZNF266Q14584 549 aa4.99□□□□□ -1.61
SNRPD3-205ENST00000468770 ESRGQ1W209 222 aa4.99□□□□□ -1.61
SNRPD3-205ENST00000468770 RGS21Q2M5E4 152 aa4.99□□□□□ -1.61
SNRPD3-205ENST00000468770 MUC21Q5SSG8 566 aa4.99□□□□□ -1.61
SNRPD3-205ENST00000468770 FAM159AQ6UWV7 190 aa4.99□□□□□ -1.61
SNRPD3-205ENST00000468770 C6orf223Q8N319 242 aa4.99□□□□□ -1.61
SNRPD3-205ENST00000468770 C18orf15Q96N68 181 aa4.99□□□□□ -1.61
SNRPD3-205ENST00000468770 RPH3ALQ9UNE2 315 aa4.99□□□□□ -1.61
SNRPD3-205ENST00000468770 LENEPQ9Y5L5 61 aa4.99□□□□□ -1.61
SNRPD3-205ENST00000468770 DNAH2Q9P225 4427 aa4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 DNAH6Q9C0G6 4158 aa4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 hCG_2014768A0A024R1R8 64 aa4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 HMGB3O15347 200 aaKnown RBP4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 PAX4O43316 350 aa4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 IGHV3-53P01767 116 aa4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 MED14OSP0DP75 135 aa4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 ZNF415Q09FC8 603 aa4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 SLAQ13239 276 aa4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 LCE2DQ5TA82 110 aaPredicted RBP4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 HSD17B11Q8NBQ5 300 aa4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 TMED6Q8WW62 240 aa4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 VSIG2Q96IQ7 327 aa4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 ST6GAL2Q96JF0 529 aa4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 MRPL16Q9NX20 251 aaKnown RBP4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 MDFICQ9P1T7 246 aa4.98□□□□□ -1.61
SNRPD3-205ENST00000468770 TRGV11A0A075B6L2 103 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 A0A096LPF7 62 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 MBP02144 154 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 CDC34P49427 236 aaPredicted RBP4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 SERF2P84101 59 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 TNP2Q05952 138 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 TMEM183BQ1AE95 376 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 TTC32Q5I0X7 151 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 Q6AWC8 147 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 GOLT1AQ6ZVE7 132 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 TMEM183AQ8IXX5 376 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 ARL6IP6Q8N6S5 226 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 INO80EQ8NBZ0 244 aaPredicted RBP4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 OR2G3Q8NGZ4 309 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 ASB13Q8WXK3 278 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 AQP10Q96PS8 301 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 SPXQ9BT56 116 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 PSMG3Q9BT73 122 aaPredicted RBP4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 UPK3BQ9BT76 320 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 TREM1Q9NP99 234 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 PRO0255Q9UI72 69 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 NAGKQ9UJ70 344 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 HHLA3Q9XRX5 114 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 MRPS16Q9Y3D3 137 aaKnown RBP4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 ICOSQ9Y6W8 199 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 MUC4Q99102 2169 aa4.97□□□□□ -1.61
SNRPD3-205ENST00000468770 KIAA1109Q2LD37 5005 aa4.96□□□□□ -1.61
SNRPD3-205ENST00000468770 TRAV8-1A0A0A6YYK1 113 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 TRAV21A0A0B4J279 112 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 TRGV4A0A0C4DH28 118 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 A0A1W2PPQ1 181 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 K7EQM0 130 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 GIPP09681 153 aaPredicted RBP4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 STAG3L2P0CL84 134 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 STAG3L3P0CL85 134 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 ARL14EPLP0DKL9 152 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 ATP6V0CP27449 155 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 GNG5P63218 68 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 Q5BKY6 102 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 RASL10AQ92737 203 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 RAB24Q969Q5 203 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 C8orf49Q96NF6 230 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 NDFIP1Q9BT67 221 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 ACTR3CQ9C0K3 210 aaPredicted RBP4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 TNFSF18Q9UNG2 199 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 HECTD4Q9Y4D8 3996 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 FAT2Q9NYQ8 4349 aa4.96□□□□□ -1.62
SNRPD3-205ENST00000468770 FXYD6-FXYD2A0A087WZ82 144 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 BORCS7-ASMTA0A0B4J1R7 106 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 SERTM2A0A1B0GWG4 89 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 F6UZH7 168 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 GNRH2O43555 120 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 CXorf1O96002 111 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 TCRAP04437 139 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 GCHFRP30047 84 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 CRYBA4P53673 196 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 SUMO1P63165 101 aaKnown RBP4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 FHL2Q14192 279 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 MRPL23Q16540 153 aaKnown RBP4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 TDRG1Q3Y452 100 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 ZNF575Q86XF7 245 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 C5orf17Q8NAS9 161 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 ZNF479Q96JC4 524 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 KCNS1Q96KK3 526 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 SGK494Q96LW2 274 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 SH3BGRL3Q9H299 93 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 SDF2L1Q9HCN8 221 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 TMEM167BQ9NRX6 74 aa4.95□□□□□ -1.62
SNRPD3-205ENST00000468770 DNAH17Q9UFH2 4485 aa4.95□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms