RNA–Protein interactions for RNA: ENST00000468723.1

GPNMB-207, Transcript of glycoprotein nmb, humanhuman

TSL 2

Gene GPNMB, Length 808 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPNMB-207ENST00000468723 MINOS1-NBL1R4GNA1 71 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 HSPE1-MOB4S4R3N1 261 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 HUWE1Q7Z6Z7 4374 aaKnown RBP2.28□□□□□ -2.04
GPNMB-207ENST00000468723 NBEAL1Q6ZS30 2694 aa2.28□□□□□ -2.04
GPNMB-207ENST00000468723 IGKV2-28A0A075B6P5 120 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 TEX50A0A1B0GTY4 177 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 VGLL3A8MV65 326 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 A8MWP4 228 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 IGKV2D-28P01615 120 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 REG1AP05451 166 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 BLVRBP30043 206 aaPredicted RBP2.27□□□□□ -2.05
GPNMB-207ENST00000468723 RBX1P62877 108 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 TMEM267Q0VDI3 215 aaPredicted RBP2.27□□□□□ -2.05
GPNMB-207ENST00000468723 PLGLAQ15195 96 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 MMDQ15546 238 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 ADM2Q7Z4H4 148 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 SLC51BQ86UW2 128 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 C5orf56Q8N8D9 126 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 PXT1Q8NFP0 134 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 MRPL30Q8TCC3 161 aaKnown RBP2.27□□□□□ -2.05
GPNMB-207ENST00000468723 ACY3Q96HD9 319 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 LINC00477Q96M19 166 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 CNBD2Q96M20 576 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 SEC22CQ9BRL7 303 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 TMEM138Q9NPI0 162 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 CKLFQ9UBR5 152 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 AK3Q9UIJ7 227 aa2.27□□□□□ -2.05
GPNMB-207ENST00000468723 AMMECR1Q9Y4X0 333 aaPredicted RBP2.27□□□□□ -2.05
GPNMB-207ENST00000468723 IGKV1OR2-108A0A075B7D4 117 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 MEIS3P1A6NDR6 274 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 A6NED7 52 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 EFCAB10A6NFE3 127 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 A8MUU9 505 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 RBP4P02753 201 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 SCTP09683 121 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 SAA2P0DJI9 122 aaPredicted RBP2.26□□□□□ -2.05
GPNMB-207ENST00000468723 HIST1H1EP10412 219 aaKnown RBP2.26□□□□□ -2.05
GPNMB-207ENST00000468723 CD34P28906 385 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 DYNLT3P51808 116 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 MOBPQ13875 183 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 MORN2Q502X0 79 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 HSD17B12Q53GQ0 312 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 UNQ5815/PRO19632Q6UWF5 114 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 Q8N2B8 174 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 ZNF439Q8NDP4 499 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 OR11H1Q8NG94 326 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 OR51D1Q8NGF3 324 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 OR2T10Q8NGZ9 312 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 OR51H1Q8NH63 302 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 GRPEL2Q8TAA5 225 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 ARHGAP5-AS1Q96IT6 56 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 B9D2Q9BPU9 175 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 NABP2Q9BQ15 211 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 PECRQ9BY49 303 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 GNB1LQ9BYB4 327 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 EIF5A2Q9GZV4 153 aaKnown RBP2.26□□□□□ -2.05
GPNMB-207ENST00000468723 MED28Q9H204 178 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 ERGIC3Q9Y282 383 aa2.26□□□□□ -2.05
GPNMB-207ENST00000468723 IGHV3OR16-8A0A075B7F1 116 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 TRAV41A0A0B4J266 112 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 IRGMA1A4Y4 181 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 ORC5O43913 435 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 IGHG2P01859 326 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 PRH1P02810 166 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 CSN2P05814 226 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 GZMHP20718 246 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 TPPP2P59282 170 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 AP3S2P59780 193 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 KRTAP10-10P60014 251 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 LSM3P62310 102 aaKnown RBP2.25□□□□□ -2.05
GPNMB-207ENST00000468723 HERVK_113P63121 156 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 FABP5Q01469 135 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 MPV17LQ2QL34 196 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 CCDC58Q4VC31 144 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 TMEM69Q5SWH9 247 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 KPRPQ5T749 579 aaPredicted RBP2.25□□□□□ -2.05
GPNMB-207ENST00000468723 GLT8D1Q68CQ7 371 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 ZFAND6Q6FIF0 208 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 IZUMO2Q6UXV1 221 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 TMEM91Q6ZNR0 172 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 IDO2Q6ZQW0 420 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 NEGR1Q7Z3B1 354 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 Q8N6K4 173 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 Q8WTZ3 238 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 CPNE2Q96FN4 548 aaPredicted RBP2.25□□□□□ -2.05
GPNMB-207ENST00000468723 CMSS1Q9BQ75 279 aaKnown RBP2.25□□□□□ -2.05
GPNMB-207ENST00000468723 MND1Q9BWT6 205 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 SCRT1Q9BWW7 348 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 LPAR5Q9H1C0 372 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 ATG5Q9H1Y0 275 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 OR2D2Q9H210 308 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 ABCG5Q9H222 651 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 SCN3BQ9NY72 215 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 ABRACLQ9P1F3 81 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 METTL1Q9UBP6 276 aaKnown RBP2.25□□□□□ -2.05
GPNMB-207ENST00000468723 LSM2Q9Y333 95 aaKnown RBP2.25□□□□□ -2.05
GPNMB-207ENST00000468723 RBM7Q9Y580 266 aaKnown RBP2.25□□□□□ -2.05
GPNMB-207ENST00000468723 PHLDA3Q9Y5J5 127 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 TRAPPC1Q9Y5R8 145 aa2.25□□□□□ -2.05
GPNMB-207ENST00000468723 DYNC2H1Q8NCM8 4307 aaKnown RBP2.24□□□□□ -2.05
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms