RNA–Protein interactions for RNA: ENST00000468211.6

PTCH1-210, Transcript of patched 1, humanhuman

TSL 1 (best) BASIC

Gene PTCH1, Length 1,254 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-210ENST00000468211 FHL2Q14192 279 aa16.77■□□□□ 0.28
PTCH1-210ENST00000468211 Q6ZRN7 208 aaPredicted RBP16.77■□□□□ 0.28
PTCH1-210ENST00000468211 KCNIP2Q9NS61 270 aa16.77■□□□□ 0.28
PTCH1-210ENST00000468211 BTF3P20290 206 aaKnown RBP16.76■□□□□ 0.27
PTCH1-210ENST00000468211 MUC21Q5SSG8 566 aa16.76■□□□□ 0.27
PTCH1-210ENST00000468211 PPP1R1CQ8WVI7 109 aa16.76■□□□□ 0.27
PTCH1-210ENST00000468211 ATP5SQ99766 215 aa16.76■□□□□ 0.27
PTCH1-210ENST00000468211 ARPC5LQ9BPX5 153 aa16.76■□□□□ 0.27
PTCH1-210ENST00000468211 MDFICQ9P1T7 246 aa16.76■□□□□ 0.27
PTCH1-210ENST00000468211 ICOSQ9Y6W8 199 aa16.76■□□□□ 0.27
PTCH1-210ENST00000468211 SIVA1O15304 175 aa16.75■□□□□ 0.27
PTCH1-210ENST00000468211 PRAF2O60831 178 aa16.75■□□□□ 0.27
PTCH1-210ENST00000468211 CRYBA4P53673 196 aa16.75■□□□□ 0.27
PTCH1-210ENST00000468211 CYCSP99999 105 aaKnown RBP16.75■□□□□ 0.27
PTCH1-210ENST00000468211 C8orf49Q96NF6 230 aa16.75■□□□□ 0.27
PTCH1-210ENST00000468211 PRO0255Q9UI72 69 aa16.75■□□□□ 0.27
PTCH1-210ENST00000468211 TRBV7-9A0A0J9YWB2 115 aa16.74■□□□□ 0.27
PTCH1-210ENST00000468211 RBAKDNA6NC62 111 aa16.74■□□□□ 0.27
PTCH1-210ENST00000468211 C17orf112F2Z3M2 114 aa16.74■□□□□ 0.27
PTCH1-210ENST00000468211 NXPH4O95158 308 aa16.74■□□□□ 0.27
PTCH1-210ENST00000468211 UBE2L3P68036 154 aaKnown RBP16.74■□□□□ 0.27
PTCH1-210ENST00000468211 ZNF266Q14584 549 aa16.74■□□□□ 0.27
PTCH1-210ENST00000468211 FFAR4Q5NUL3 377 aa16.74■□□□□ 0.27
PTCH1-210ENST00000468211 ZNF415Q09FC8 603 aa16.73■□□□□ 0.27
PTCH1-210ENST00000468211 SMIM3Q9BZL3 60 aa16.73■□□□□ 0.27
PTCH1-210ENST00000468211 HHLA3Q9XRX5 114 aa16.73■□□□□ 0.27
PTCH1-210ENST00000468211 HSPB11Q9Y547 144 aa16.73■□□□□ 0.27
PTCH1-210ENST00000468211 TNFRSF18Q9Y5U5 241 aa16.73■□□□□ 0.27
PTCH1-210ENST00000468211 MPC2O95563 127 aa16.72■□□□□ 0.27
PTCH1-210ENST00000468211 CSN1S1P47710 185 aa16.72■□□□□ 0.27
PTCH1-210ENST00000468211 LYPD5Q6UWN5 251 aa16.72■□□□□ 0.27
PTCH1-210ENST00000468211 LYPD1Q8N2G4 141 aa16.72■□□□□ 0.27
PTCH1-210ENST00000468211 MARVELD1Q9BSK0 173 aa16.72■□□□□ 0.27
PTCH1-210ENST00000468211 DIRC3C9JPN6 131 aa16.71■□□□□ 0.27
PTCH1-210ENST00000468211 SFTA3P0C7M3 94 aa16.71■□□□□ 0.27
PTCH1-210ENST00000468211 FUSP35637 526 aaKnown RBP eCLIP16.7■□□□□ 0.26
PTCH1-210ENST00000468211 Q6AWC8 147 aa16.7■□□□□ 0.26
PTCH1-210ENST00000468211 Q8N1X5 172 aa16.7■□□□□ 0.26
PTCH1-210ENST00000468211 ZNF479Q96JC4 524 aa16.7■□□□□ 0.26
PTCH1-210ENST00000468211 WFDC1Q9HC57 220 aa16.7■□□□□ 0.26
PTCH1-210ENST00000468211 SLAQ13239 276 aa16.69■□□□□ 0.26
PTCH1-210ENST00000468211 TMEM183BQ1AE95 376 aa16.69■□□□□ 0.26
PTCH1-210ENST00000468211 KHDC3LQ587J8 217 aa16.69■□□□□ 0.26
PTCH1-210ENST00000468211 TMEM183AQ8IXX5 376 aa16.69■□□□□ 0.26
PTCH1-210ENST00000468211 HYLS1Q96M11 299 aa16.69■□□□□ 0.26
PTCH1-210ENST00000468211 RPL12P30050 165 aaKnown RBP16.68■□□□□ 0.26
PTCH1-210ENST00000468211 MRPL23Q16540 153 aaKnown RBP16.68■□□□□ 0.26
PTCH1-210ENST00000468211 TRGV4A0A0C4DH28 118 aa16.67■□□□□ 0.26
PTCH1-210ENST00000468211 A6NHS1 94 aa16.67■□□□□ 0.26
PTCH1-210ENST00000468211 SSNA1O43805 119 aa16.67■□□□□ 0.26
PTCH1-210ENST00000468211 SCGB1C1Q8TD33 95 aa16.67■□□□□ 0.26
PTCH1-210ENST00000468211 MBD2Q9UBB5 411 aa16.67■□□□□ 0.26
PTCH1-210ENST00000468211 LENEPQ9Y5L5 61 aa16.67■□□□□ 0.26
PTCH1-210ENST00000468211 IFNA5P01569 189 aa16.66■□□□□ 0.26
PTCH1-210ENST00000468211 NEGR1Q7Z3B1 354 aa16.66■□□□□ 0.26
PTCH1-210ENST00000468211 IQCF2Q8IXL9 164 aa16.66■□□□□ 0.26
PTCH1-210ENST00000468211 OR10G4Q8NGN3 311 aa16.66■□□□□ 0.26
PTCH1-210ENST00000468211 RASL10AQ92737 203 aa16.66■□□□□ 0.26
PTCH1-210ENST00000468211 SCRT2Q9NQ03 307 aa16.66■□□□□ 0.26
PTCH1-210ENST00000468211 RPH3ALQ9UNE2 315 aa16.66■□□□□ 0.26
PTCH1-210ENST00000468211 PGPA6NDG6 321 aa16.65■□□□□ 0.26
PTCH1-210ENST00000468211 K7EQD1 137 aa16.65■□□□□ 0.26
PTCH1-210ENST00000468211 TAS2R45P59539 299 aa16.65■□□□□ 0.26
PTCH1-210ENST00000468211 FAM159AQ6UWV7 190 aa16.65■□□□□ 0.26
PTCH1-210ENST00000468211 TVP23CQ96ET8 276 aa16.65■□□□□ 0.26
PTCH1-210ENST00000468211 OTORQ9NRC9 128 aa16.65■□□□□ 0.26
PTCH1-210ENST00000468211 NAGKQ9UJ70 344 aa16.65■□□□□ 0.26
PTCH1-210ENST00000468211 GNRH2O43555 120 aa16.64■□□□□ 0.25
PTCH1-210ENST00000468211 TMED6Q8WW62 240 aa16.64■□□□□ 0.25
PTCH1-210ENST00000468211 SPXQ9BT56 116 aa16.64■□□□□ 0.25
PTCH1-210ENST00000468211 PTTG2Q9NZH5 202 aa16.64■□□□□ 0.25
PTCH1-210ENST00000468211 TRGV11A0A075B6L2 103 aa16.63■□□□□ 0.25
PTCH1-210ENST00000468211 PET100P0DJ07 73 aa16.63■□□□□ 0.25
PTCH1-210ENST00000468211 GYPEP15421 78 aa16.63■□□□□ 0.25
PTCH1-210ENST00000468211 RAB2AP61019 212 aa16.63■□□□□ 0.25
PTCH1-210ENST00000468211 TDRG1Q3Y452 100 aa16.63■□□□□ 0.25
PTCH1-210ENST00000468211 GOLT1AQ6ZVE7 132 aa16.63■□□□□ 0.25
PTCH1-210ENST00000468211 WFDC10BQ8IUB3 73 aa16.63■□□□□ 0.25
PTCH1-210ENST00000468211 TRAV8-1A0A0A6YYK1 113 aa16.62■□□□□ 0.25
PTCH1-210ENST00000468211 IGHV3-16A0A0C4DH30 117 aa16.61■□□□□ 0.25
PTCH1-210ENST00000468211 F6UZH7 168 aa16.61■□□□□ 0.25
PTCH1-210ENST00000468211 HMGB3O15347 200 aaKnown RBP16.61■□□□□ 0.25
PTCH1-210ENST00000468211 SRIP30626 198 aa16.61■□□□□ 0.25
PTCH1-210ENST00000468211 GNG5P63218 68 aa16.61■□□□□ 0.25
PTCH1-210ENST00000468211 CMTM2Q8TAZ6 248 aa16.61■□□□□ 0.25
PTCH1-210ENST00000468211 LOC100131303A0A0U1RQF7 123 aa16.6■□□□□ 0.25
PTCH1-210ENST00000468211 DNAH10OSP0CZ25 163 aa16.6■□□□□ 0.25
PTCH1-210ENST00000468211 ACOT6Q3I5F7 207 aaPredicted RBP16.6■□□□□ 0.25
PTCH1-210ENST00000468211 LY96Q9Y6Y9 160 aa16.6■□□□□ 0.25
PTCH1-210ENST00000468211 TRAV4A0A0B4J268 109 aa16.59■□□□□ 0.25
PTCH1-210ENST00000468211 PQLC2Q6ZP29 291 aa16.59■□□□□ 0.25
PTCH1-210ENST00000468211 TYMSP04818 313 aa16.58■□□□□ 0.24
PTCH1-210ENST00000468211 ERVFC1-1P60608 527 aa16.58■□□□□ 0.24
PTCH1-210ENST00000468211 SGK494Q96LW2 274 aa16.58■□□□□ 0.24
PTCH1-210ENST00000468211 PGPEP1Q9NXJ5 209 aa16.58■□□□□ 0.24
PTCH1-210ENST00000468211 A0A1W2PPV4 95 aa16.57■□□□□ 0.24
PTCH1-210ENST00000468211 M0R2P5 195 aa16.57■□□□□ 0.24
PTCH1-210ENST00000468211 ORM1P02763 201 aa16.57■□□□□ 0.24
PTCH1-210ENST00000468211 DEFA1P59665 94 aa16.57■□□□□ 0.24
PTCH1-210ENST00000468211 DEFA3P59666 94 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms