RNA–Protein interactions for RNA: ENST00000464454.1

CLK1-208, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 484 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-208ENST00000464454 CD2P06729 351 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 MAXP61244 160 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 RRAS2P62070 204 aaPredicted RBP0.98□□□□□ -2.25
CLK1-208ENST00000464454 NCS1P62166 190 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 BTG2P78543 158 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 EMX2Q04743 252 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 CCSMST1Q4G0I0 132 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 SPRNQ5BIV9 151 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 ZNF833PQ6ZTB9 187 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 MMGT1Q8N4V1 131 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 LINC00052Q96N35 136 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 ZNF714Q96N38 554 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 AMELYQ99218 206 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 NABP2Q9BQ15 211 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 GGACTQ9BVM4 153 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 SLC35B3Q9H1N7 401 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 TMEM14CQ9P0S9 112 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 KDM5CP41229 1560 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 NUP210Q8TEM1 1887 aaPredicted RBP0.98□□□□□ -2.25
CLK1-208ENST00000464454 COL1A1P02452 1464 aaPredicted RBP0.98□□□□□ -2.25
CLK1-208ENST00000464454 ERBINQ96RT1 1412 aa0.98□□□□□ -2.25
CLK1-208ENST00000464454 FER1L6Q2WGJ9 1857 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 ADGRB1O14514 1584 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 hDV103S1A0JD37 113 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 PITX3O75364 302 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 ERC2-IT1O76042 136 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 IGHV3-33P01772 117 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 SLC25A4P12235 298 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 TPT1P13693 172 aaKnown RBP0.97□□□□□ -2.25
CLK1-208ENST00000464454 FABP4P15090 132 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 S100A1P23297 94 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 CDK6Q00534 326 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 PRB3Q04118 309 aaPredicted RBP0.97□□□□□ -2.25
CLK1-208ENST00000464454 LINC00322Q6ZN03 302 aaPredicted RBP0.97□□□□□ -2.25
CLK1-208ENST00000464454 ARPINQ7Z6K5 226 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 TEX29Q8N6K0 151 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 BRK1Q8WUW1 75 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 MUCL1Q96DR8 90 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 METTL1Q9UBP6 276 aaKnown RBP0.97□□□□□ -2.25
CLK1-208ENST00000464454 MPC1Q9Y5U8 109 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 DLC1Q96QB1 1528 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 UHRF1BP1LA0JNW5 1464 aa0.97□□□□□ -2.25
CLK1-208ENST00000464454 TRBV20-1A0A075B6N2 111 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 TRAV16A0A0A6YYK6 109 aaPredicted RBP0.96□□□□□ -2.26
CLK1-208ENST00000464454 M0R233 179 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 M0R2P5 195 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 NUPR1O60356 82 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 IGF2P01344 180 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 TRACP01848 142 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 CD3DP04234 171 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 BLCAPP62952 87 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 PLGLB1Q02325 96 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 HSD17B12Q53GQ0 312 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 GLIPR1L1Q6UWM5 242 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 IZUMO2Q6UXV1 221 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 CTAGE3PQ8IX95 158 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 ZNF431Q8TF32 576 aaPredicted RBP0.96□□□□□ -2.26
CLK1-208ENST00000464454 VPS25Q9BRG1 176 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 SMIM3Q9BZL3 60 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 TMEM191AQ9H0A3 160 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 TNFSF18Q9UNG2 199 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 GRIN2AQ12879 1464 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 RIMS1Q86UR5 1692 aaKnown RBP0.96□□□□□ -2.26
CLK1-208ENST00000464454 MYO5AQ9Y4I1 1855 aaKnown RBP0.96□□□□□ -2.26
CLK1-208ENST00000464454 PTPRGP23470 1445 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 SMG6Q86US8 1419 aaKnown RBP0.96□□□□□ -2.26
CLK1-208ENST00000464454 CASP8AP2Q9UKL3 1982 aa0.96□□□□□ -2.26
CLK1-208ENST00000464454 SNRNP200O75643 2136 aaKnown RBP0.95□□□□□ -2.26
CLK1-208ENST00000464454 ANKRD31Q8N7Z5 1873 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 FAM236AA0A1B0GUQ0 79 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 FAM236BA0A1B0GV22 79 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 C9orf170A2RU37 121 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 ZNF670-ZNF695F2Z2N8 137 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 CDC42EP2O14613 210 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 NCR3O14931 201 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 SMIM24O75264 130 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 CD14P08571 375 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 CXCL8P10145 99 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 HIST1H1BP16401 226 aaKnown RBP0.95□□□□□ -2.26
CLK1-208ENST00000464454 COPZ1P61923 177 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 LSM3P62310 102 aaKnown RBP0.95□□□□□ -2.26
CLK1-208ENST00000464454 ATP11AUNQ6ZP68 121 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 OR5AS1Q8N127 324 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 PLPP5Q8NEB5 264 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 ARL11Q969Q4 196 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 TMEM203Q969S6 136 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 DPH3Q96FX2 82 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 OR4C12Q96R67 309 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 LPAR5Q9H1C0 372 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 SAR1AQ9NR31 198 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 TPRKBQ9Y3C4 175 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 EML5Q05BV3 1969 aa0.95□□□□□ -2.26
CLK1-208ENST00000464454 LAMA4Q16363 1823 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 PNMA8CA0A1B0GUJ8 204 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 LOC107986453A0A1B0GWG9 222 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 FAM92AA1XBS5 289 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 F8W1H4 67 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 J3QR89 54 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 YPEL1O60688 119 aa0.94□□□□□ -2.26
CLK1-208ENST00000464454 MT-ND6P03923 174 aa0.94□□□□□ -2.26
Retrieved 100 of 20,778 RNA–protein pairs in 63.8 ms