RNA–Protein interactions for RNA: ENST00000463041.1

PTPRF-210, Transcript of protein tyrosine phosphatase, receptor type F, humanhuman

TSL 3

Gene PTPRF, Length 298 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRF-210ENST00000463041 TMED6Q8WW62 240 aa5.06□□□□□ -1.6
PTPRF-210ENST00000463041 PHYHIPLQ96FC7 376 aa5.06□□□□□ -1.6
PTPRF-210ENST00000463041 SMIM3Q9BZL3 60 aa5.06□□□□□ -1.6
PTPRF-210ENST00000463041 WFDC1Q9HC57 220 aa5.06□□□□□ -1.6
PTPRF-210ENST00000463041 MBD2Q9UBB5 411 aa5.06□□□□□ -1.6
PTPRF-210ENST00000463041 KLF12Q9Y4X4 402 aa5.06□□□□□ -1.6
PTPRF-210ENST00000463041 PGPA6NDG6 321 aa5.05□□□□□ -1.6
PTPRF-210ENST00000463041 BTF3P20290 206 aaKnown RBP5.05□□□□□ -1.6
PTPRF-210ENST00000463041 UBE2L3P68036 154 aaKnown RBP5.05□□□□□ -1.6
PTPRF-210ENST00000463041 TTC32Q5I0X7 151 aa5.05□□□□□ -1.6
PTPRF-210ENST00000463041 CMTM2Q8TAZ6 248 aa5.05□□□□□ -1.6
PTPRF-210ENST00000463041 VSIG2Q96IQ7 327 aa5.05□□□□□ -1.6
PTPRF-210ENST00000463041 ARPC5LQ9BPX5 153 aa5.05□□□□□ -1.6
PTPRF-210ENST00000463041 UPK3BQ9BT76 320 aa5.05□□□□□ -1.6
PTPRF-210ENST00000463041 TMPRSS5Q9H3S3 457 aa5.05□□□□□ -1.6
PTPRF-210ENST00000463041 OTORQ9NRC9 128 aa5.05□□□□□ -1.6
PTPRF-210ENST00000463041 TP53TG3Q9ULZ0 132 aa5.05□□□□□ -1.6
PTPRF-210ENST00000463041 ALG5Q9Y673 324 aa5.05□□□□□ -1.6
PTPRF-210ENST00000463041 RYR1P21817 5038 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 A0A096LPF7 62 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 A0A1W2PPQ1 181 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 PAX4O43316 350 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 PTTG1O95997 202 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 SERF2P84101 59 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 ZNF415Q09FC8 603 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 PRR9Q5T870 116 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 Q6AWC8 147 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 FAM159AQ6UWV7 190 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 Q6ZQT7 251 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 IQCF2Q8IXL9 164 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 OR10G4Q8NGN3 311 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 OR10G9Q8NGN4 311 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 OR10G7Q8NGN6 311 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 ST6GAL2Q96JF0 529 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 HYLS1Q96M11 299 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 SPXQ9BT56 116 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 MED28Q9H204 178 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 PRO0255Q9UI72 69 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 HHLA3Q9XRX5 114 aa5.04□□□□□ -1.6
PTPRF-210ENST00000463041 MRPS16Q9Y3D3 137 aaKnown RBP5.04□□□□□ -1.6
PTPRF-210ENST00000463041 TRGV11A0A075B6L2 103 aa5.03□□□□□ -1.6
PTPRF-210ENST00000463041 MBP02144 154 aa5.03□□□□□ -1.6
PTPRF-210ENST00000463041 TNP2Q05952 138 aa5.03□□□□□ -1.6
PTPRF-210ENST00000463041 FHL2Q14192 279 aa5.03□□□□□ -1.6
PTPRF-210ENST00000463041 MRPL23Q16540 153 aaKnown RBP5.03□□□□□ -1.6
PTPRF-210ENST00000463041 TDRG1Q3Y452 100 aa5.03□□□□□ -1.6
PTPRF-210ENST00000463041 OR2G3Q8NGZ4 309 aa5.03□□□□□ -1.6
PTPRF-210ENST00000463041 Q8TAT8 98 aa5.03□□□□□ -1.6
PTPRF-210ENST00000463041 ASB13Q8WXK3 278 aa5.03□□□□□ -1.6
PTPRF-210ENST00000463041 RASL10AQ92737 203 aa5.03□□□□□ -1.6
PTPRF-210ENST00000463041 AQP10Q96PS8 301 aa5.03□□□□□ -1.6
PTPRF-210ENST00000463041 PSMG3Q9BT73 122 aaPredicted RBP5.03□□□□□ -1.6
PTPRF-210ENST00000463041 MDFICQ9P1T7 246 aa5.03□□□□□ -1.6
PTPRF-210ENST00000463041 ICOSQ9Y6W8 199 aa5.03□□□□□ -1.6
PTPRF-210ENST00000463041 LRP1BQ9NZR2 4599 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 PCLOQ9Y6V0 5065 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 TRAV21A0A0B4J279 112 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 SERTM2A0A1B0GWG4 89 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 STAG3L2P0CL84 134 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 STAG3L3P0CL85 134 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 CDC34P49427 236 aaPredicted RBP5.02□□□□□ -1.61
PTPRF-210ENST00000463041 CRYBA4P53673 196 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 RAB2AP61019 212 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 MUC21Q5SSG8 566 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 GOLT1AQ6ZVE7 132 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 INO80EQ8NBZ0 244 aaPredicted RBP5.02□□□□□ -1.61
PTPRF-210ENST00000463041 SUN5Q8TC36 379 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 KCNS1Q96KK3 526 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 TREM1Q9NP99 234 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 MRPL16Q9NX20 251 aaKnown RBP5.02□□□□□ -1.61
PTPRF-210ENST00000463041 TNFSF18Q9UNG2 199 aa5.02□□□□□ -1.61
PTPRF-210ENST00000463041 TRGV4A0A0C4DH28 118 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 K7EQM0 130 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 SIVA1O15304 175 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 HMGB3O15347 200 aaKnown RBP5.01□□□□□ -1.61
PTPRF-210ENST00000463041 GNRH2O43555 120 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 EIF3GO75821 320 aaKnown RBP eCLIP5.01□□□□□ -1.61
PTPRF-210ENST00000463041 CXorf1O96002 111 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 IGHV3-53P01767 116 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 GIPP09681 153 aaPredicted RBP5.01□□□□□ -1.61
PTPRF-210ENST00000463041 ARL14EPLP0DKL9 152 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 ATP6V0CP27449 155 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 TMEM183BQ1AE95 376 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 LYPD5Q6UWN5 251 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 NEGR1Q7Z3B1 354 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 TMEM183AQ8IXX5 376 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 HSD17B11Q8NBQ5 300 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 RAB24Q969Q5 203 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 KRTAP17-1Q9BYP8 105 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 ACTR3CQ9C0K3 210 aaPredicted RBP5.01□□□□□ -1.61
PTPRF-210ENST00000463041 TMEM167BQ9NRX6 74 aa5.01□□□□□ -1.61
PTPRF-210ENST00000463041 HSPG2P98160 4391 aa5□□□□□ -1.61
PTPRF-210ENST00000463041 TRAV9-2A0A087WT02 112 aa5□□□□□ -1.61
PTPRF-210ENST00000463041 BORCS7-ASMTA0A0B4J1R7 106 aa5□□□□□ -1.61
PTPRF-210ENST00000463041 TRAV4A0A0B4J268 109 aa5□□□□□ -1.61
PTPRF-210ENST00000463041 IGHV3-16A0A0C4DH30 117 aa5□□□□□ -1.61
PTPRF-210ENST00000463041 FBLL1A6NHQ2 334 aaKnown RBP5□□□□□ -1.61
PTPRF-210ENST00000463041 C16orf90A8MZG2 172 aa5□□□□□ -1.61
PTPRF-210ENST00000463041 K7EP13 123 aa5□□□□□ -1.61
PTPRF-210ENST00000463041 M0R2P5 195 aa5□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 112.7 ms