RNA–Protein interactions for RNA: ENST00000462668.5

SMC4-203, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 4,235 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-203ENST00000462668 MUC6Q6W4X9 2439 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 RYR1P21817 5038 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 DOCK9Q9BZ29 2069 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 C7orf71A4D174 169 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 H3BT86 120 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 TCL1BO95988 128 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 NAPSAO96009 420 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 CKS1BP61024 79 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 TRAPPC6BQ86SZ2 158 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 GRPEL2Q8TAA5 225 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 DIRC1Q969H9 104 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 YPEL2Q96QA6 119 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 CGREF1Q99674 301 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 SOX21Q9Y651 276 aaPredicted RBP1.5□□□□□ -2.17
SMC4-203ENST00000462668 ZNF727A8MUV8 499 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 SYNGR2O43760 224 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 P0C880 135 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 S100A11P31949 105 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 RAB5CP51148 216 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 DNAJB13P59910 316 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 ZNF705AQ6ZN79 300 aaPredicted RBP1.5□□□□□ -2.17
SMC4-203ENST00000462668 Q6ZQT0 140 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 MIEN1Q9BRT3 115 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 PIEZO2Q9H5I5 2752 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 LGALS3P17931 250 aaKnown RBP1.5□□□□□ -2.17
SMC4-203ENST00000462668 NFYBP25208 207 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 KRTAP10-8P60410 259 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 CCDC153Q494R4 210 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 SPACA4Q8TDM5 124 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 FGF13Q92913 245 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 NAT8BQ9UHF3 227 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 CEP192Q8TEP8 1941 aa1.5□□□□□ -2.17
SMC4-203ENST00000462668 C9JAW5 83 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 H7C2G1 150 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 OR2T1O43869 369 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 NNATQ16517 81 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 CCDC58Q4VC31 144 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 KRTAP5-11Q6L8G4 156 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 HIST1H2BLQ99880 126 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 HIGD1AQ9Y241 93 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 NOTCH3Q9UM47 2321 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 ZNF407Q9C0G0 2248 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 LOC107984640A0A0U1RRK4 108 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 A0A1W2PNN7 141 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 CYB5BO43169 146 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 TMEM155Q4W5P6 130 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 MRPS24Q96EL2 167 aaKnown RBP1.49□□□□□ -2.17
SMC4-203ENST00000462668 BORCS8Q96FH0 119 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 C20orf166-AS1Q96NR2 134 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 SLC39A9Q9NUM3 307 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 A0A0J9YX75 114 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 RFPL4AA6NLU0 287 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 RFPL4AL1F8VTS6 287 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 DBIP07108 87 aaKnown RBP1.49□□□□□ -2.17
SMC4-203ENST00000462668 EVI2AP22794 236 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 RPL22P35268 128 aaKnown RBP1.49□□□□□ -2.17
SMC4-203ENST00000462668 KRTAP10-7P60409 375 aaPredicted RBP1.49□□□□□ -2.17
SMC4-203ENST00000462668 ROMO1P60602 79 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 ZC2HC1AQ96GY0 325 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 ARHGAP32A7KAX9 2087 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 DNAH2Q9P225 4427 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 PLXNA2O75051 1894 aa1.49□□□□□ -2.17
SMC4-203ENST00000462668 A0A1B0GW64 132 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 HLA-EP13747 358 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 PSMF1Q92530 271 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 LINC00467Q9BRT7 94 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 HSPB8Q9UJY1 196 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 PCM1Q15154 2024 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 SDC4P31431 198 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 TMBIM6P55061 237 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 GLYATL3Q5SZD4 288 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 PRADC1Q9BSG0 188 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 TRPM6Q9BX84 2022 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 KIAA1109Q2LD37 5005 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 MYH8P13535 1937 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 HELZP42694 1942 aaKnown RBP1.48□□□□□ -2.17
SMC4-203ENST00000462668 TRGV10A0A0A0MS01 117 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 KRTAP9-6A8MVA2 160 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 NCR2O95944 276 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 S100A4P26447 101 aaKnown RBP1.48□□□□□ -2.17
SMC4-203ENST00000462668 KRTAP10-10P60014 251 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 Q8IYB0 196 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 SCN8AQ9UQD0 1980 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 VPS13DQ5THJ4 4388 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 B4DSR2 109 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 PEBP1P30086 187 aaKnown RBP1.48□□□□□ -2.17
SMC4-203ENST00000462668 ARPP19P56211 112 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 LGALSLQ3ZCW2 172 aaPredicted RBP1.48□□□□□ -2.17
SMC4-203ENST00000462668 OR4S1Q8NGB4 309 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 OR4K15Q8NH41 348 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 ZNF418Q8TF45 676 aaPredicted RBP1.48□□□□□ -2.17
SMC4-203ENST00000462668 APCP25054 2843 aa1.48□□□□□ -2.17
SMC4-203ENST00000462668 NIPBLQ6KC79 2804 aaeCLIP1.48□□□□□ -2.173e-6■□□□□ 8.5
SMC4-203ENST00000462668 GABARAPH6UMI1 98 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 TXNDC9O14530 226 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 TP53I11O14683 189 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 BANF1O75531 89 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 ZNF90Q03938 601 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 PDZD9Q8IXQ8 264 aa1.47□□□□□ -2.17
SMC4-203ENST00000462668 SLC30A7Q8NEW0 376 aa1.47□□□□□ -2.17
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms