RNA–Protein interactions for RNA: ENST00000462494.5

ACTB-207, Transcript of actin beta, humanhuman

TSL 5

Gene ACTB, Length 2,245 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-207ENST00000462494 IGHV1-69P01742 117 aa12.98□□□□□ -0.33
ACTB-207ENST00000462494 VAMP3Q15836 100 aa12.98□□□□□ -0.33
ACTB-207ENST00000462494 LY6EQ16553 131 aa12.98□□□□□ -0.33
ACTB-207ENST00000462494 CBY3A6NI87 242 aa12.97□□□□□ -0.33
ACTB-207ENST00000462494 TAX1BP3O14907 124 aa12.97□□□□□ -0.33
ACTB-207ENST00000462494 ARL3P36405 182 aa12.97□□□□□ -0.33
ACTB-207ENST00000462494 LEPP41159 167 aa12.97□□□□□ -0.33
ACTB-207ENST00000462494 C2orf91Q6ZV80 131 aa12.97□□□□□ -0.33
ACTB-207ENST00000462494 PIFOQ8TCI5 191 aa12.97□□□□□ -0.33
ACTB-207ENST00000462494 J3KRW8 73 aa12.97□□□□□ -0.33
ACTB-207ENST00000462494 PRORYQ9H606 182 aa12.97□□□□□ -0.33
ACTB-207ENST00000462494 U3KQE9 123 aa12.97□□□□□ -0.33
ACTB-207ENST00000462494 ABCA2Q9BZC7 2435 aa12.96□□□□□ -0.33
ACTB-207ENST00000462494 IGHV4-61A0A0C4DH41 118 aa12.96□□□□□ -0.33
ACTB-207ENST00000462494 FAM223BA6NKX1 122 aa12.96□□□□□ -0.33
ACTB-207ENST00000462494 TRBV12-3P01733 135 aa12.96□□□□□ -0.33
ACTB-207ENST00000462494 FAM223AQ8IWN6 122 aa12.96□□□□□ -0.33
ACTB-207ENST00000462494 DEFB125Q8N687 156 aa12.96□□□□□ -0.33
ACTB-207ENST00000462494 UFC1Q9Y3C8 167 aa12.96□□□□□ -0.33
ACTB-207ENST00000462494 COL12A1Q99715 3063 aa12.96□□□□□ -0.33
ACTB-207ENST00000462494 MRPL53Q96EL3 112 aaKnown RBP12.96□□□□□ -0.34
ACTB-207ENST00000462494 PIMREGQ9BSJ6 248 aa12.96□□□□□ -0.34
ACTB-207ENST00000462494 DKK2Q9UBU2 259 aa12.96□□□□□ -0.34
ACTB-207ENST00000462494 UNQ9165/PRO28630Q6UXU0 137 aa12.95□□□□□ -0.34
ACTB-207ENST00000462494 C9orf47Q6ZRZ4 202 aa12.95□□□□□ -0.34
ACTB-207ENST00000462494 SMAD7O15105 426 aaKnown RBP12.94□□□□□ -0.34
ACTB-207ENST00000462494 IGHV4-38-2P0DP08 117 aa12.94□□□□□ -0.34
ACTB-207ENST00000462494 C19orf54Q5BKX5 351 aa12.94□□□□□ -0.34
ACTB-207ENST00000462494 SMIM15Q7Z3B0 74 aa12.94□□□□□ -0.34
ACTB-207ENST00000462494 C20orf173Q96LM9 149 aa12.94□□□□□ -0.34
ACTB-207ENST00000462494 NXT2Q9NPJ8 142 aaKnown RBP12.94□□□□□ -0.34
ACTB-207ENST00000462494 TRAV26-2A0A0B4J265 109 aa12.94□□□□□ -0.34
ACTB-207ENST00000462494 IGHV7-4-1A0A0J9YVY3 117 aa12.94□□□□□ -0.34
ACTB-207ENST00000462494 IGHV3-11P01762 117 aa12.94□□□□□ -0.34
ACTB-207ENST00000462494 FGF6P10767 208 aa12.94□□□□□ -0.34
ACTB-207ENST00000462494 OR1N2Q8NGR9 330 aa12.94□□□□□ -0.34
ACTB-207ENST00000462494 GLMPQ8WWB7 406 aa12.94□□□□□ -0.34
ACTB-207ENST00000462494 HIF1ANQ9NWT6 349 aa12.94□□□□□ -0.34
ACTB-207ENST00000462494 NMUP48645 174 aa12.93□□□□□ -0.34
ACTB-207ENST00000462494 SPANXN1Q5VSR9 72 aa12.93□□□□□ -0.34
ACTB-207ENST00000462494 OR4C5Q8NGB2 326 aa12.93□□□□□ -0.34
ACTB-207ENST00000462494 DPF1Q92782 380 aa12.93□□□□□ -0.34
ACTB-207ENST00000462494 CCL19Q99731 98 aa12.93□□□□□ -0.34
ACTB-207ENST00000462494 IGF1P05019 195 aa12.93□□□□□ -0.34
ACTB-207ENST00000462494 FCER1GP30273 86 aa12.93□□□□□ -0.34
ACTB-207ENST00000462494 RPL11P62913 178 aaKnown RBP12.93□□□□□ -0.34
ACTB-207ENST00000462494 PRR9Q5T870 116 aa12.93□□□□□ -0.34
ACTB-207ENST00000462494 MAP1AP78559 2803 aaPredicted RBP12.93□□□□□ -0.34
ACTB-207ENST00000462494 TMEM97Q5BJF2 176 aa12.92□□□□□ -0.34
ACTB-207ENST00000462494 OR2K2Q8NGT1 345 aa12.92□□□□□ -0.34
ACTB-207ENST00000462494 H3BUX3 64 aa12.92□□□□□ -0.34
ACTB-207ENST00000462494 H3BVH4 76 aa12.92□□□□□ -0.34
ACTB-207ENST00000462494 PRSS1P07477 247 aa12.92□□□□□ -0.34
ACTB-207ENST00000462494 DEFB1P60022 68 aa12.92□□□□□ -0.34
ACTB-207ENST00000462494 C9orf139Q6ZV77 190 aa12.92□□□□□ -0.34
ACTB-207ENST00000462494 TMEM158Q8WZ71 300 aa12.92□□□□□ -0.34
ACTB-207ENST00000462494 IGKV3-7A0A075B6H7 116 aa12.91□□□□□ -0.34
ACTB-207ENST00000462494 CD5LO43866 347 aa12.91□□□□□ -0.34
ACTB-207ENST00000462494 BOD1L2Q8IYS8 172 aa12.91□□□□□ -0.34
ACTB-207ENST00000462494 MEGF9Q9H1U4 602 aa12.91□□□□□ -0.34
ACTB-207ENST00000462494 SELENOKQ9Y6D0 94 aa12.91□□□□□ -0.34
ACTB-207ENST00000462494 LINC01546A6NGU7 62 aa12.9□□□□□ -0.34
ACTB-207ENST00000462494 CRIP2P52943 208 aaPredicted RBP12.9□□□□□ -0.34
ACTB-207ENST00000462494 LCNL1Q6ZST4 164 aa12.9□□□□□ -0.34
ACTB-207ENST00000462494 ATP6V0BQ99437 205 aa12.9□□□□□ -0.34
ACTB-207ENST00000462494 PF4V1P10720 104 aa12.9□□□□□ -0.34
ACTB-207ENST00000462494 PCP2Q8IVA1 136 aa12.9□□□□□ -0.34
ACTB-207ENST00000462494 Q8N8P6 123 aa12.9□□□□□ -0.34
ACTB-207ENST00000462494 KLK15Q9H2R5 256 aa12.9□□□□□ -0.34
ACTB-207ENST00000462494 NDUFA4O00483 81 aa12.89□□□□□ -0.35
ACTB-207ENST00000462494 SPRY2O43597 315 aa12.89□□□□□ -0.35
ACTB-207ENST00000462494 BLCAPP62952 87 aa12.89□□□□□ -0.35
ACTB-207ENST00000462494 AMMECR1LQ6DCA0 310 aa12.89□□□□□ -0.35
ACTB-207ENST00000462494 GPHB5Q86YW7 130 aa12.89□□□□□ -0.35
ACTB-207ENST00000462494 OR10J6PQ8NGY7 276 aa12.89□□□□□ -0.35
ACTB-207ENST00000462494 C10orf105Q8TEF2 133 aa12.89□□□□□ -0.35
ACTB-207ENST00000462494 NPFFR1Q9GZQ6 430 aa12.89□□□□□ -0.35
ACTB-207ENST00000462494 A1L4Q6 167 aa12.89□□□□□ -0.35
ACTB-207ENST00000462494 CLEC2AQ6UVW9 174 aa12.89□□□□□ -0.35
ACTB-207ENST00000462494 ATP5J2P56134 94 aa12.88□□□□□ -0.35
ACTB-207ENST00000462494 Q6ZS46 218 aa12.88□□□□□ -0.35
ACTB-207ENST00000462494 FOXC2Q99958 501 aa12.88□□□□□ -0.35
ACTB-207ENST00000462494 PPP1R14DQ9NXH3 145 aa12.88□□□□□ -0.35
ACTB-207ENST00000462494 IGLV2-18A0A075B6J9 118 aa12.88□□□□□ -0.35
ACTB-207ENST00000462494 IGHV4-30-2A0A087WSY4 118 aa12.88□□□□□ -0.35
ACTB-207ENST00000462494 C7orf71A4D174 169 aa12.88□□□□□ -0.35
ACTB-207ENST00000462494 ODF1Q14990 250 aa12.88□□□□□ -0.35
ACTB-207ENST00000462494 NRACQ8N912 160 aa12.88□□□□□ -0.35
ACTB-207ENST00000462494 OR4X2Q8NGF9 303 aa12.88□□□□□ -0.35
ACTB-207ENST00000462494 IGHG2P01859 326 aa12.87□□□□□ -0.35
ACTB-207ENST00000462494 LINC00477Q96M19 166 aa12.87□□□□□ -0.35
ACTB-207ENST00000462494 M0R381 172 aa12.86□□□□□ -0.35
ACTB-207ENST00000462494 SMIM17P0DL12 118 aa12.86□□□□□ -0.35
ACTB-207ENST00000462494 SEC11AP67812 179 aa12.86□□□□□ -0.35
ACTB-207ENST00000462494 OR9G4Q8NGQ1 327 aa12.86□□□□□ -0.35
ACTB-207ENST00000462494 USMG5Q96IX5 58 aa12.86□□□□□ -0.35
ACTB-207ENST00000462494 SPG11Q96JI7 2443 aa12.86□□□□□ -0.35
ACTB-207ENST00000462494 F6UB75 175 aa12.86□□□□□ -0.35
ACTB-207ENST00000462494 S100A4P26447 101 aaKnown RBP12.86□□□□□ -0.35
ACTB-207ENST00000462494 LAGE3Q14657 143 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms