RNA–Protein interactions for RNA: ENST00000462482.1

SKA3-204, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 750 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-204ENST00000462482 SRIP30626 198 aa10.54□□□□□ -0.72
SKA3-204ENST00000462482 CRYBA4P53673 196 aa10.54□□□□□ -0.72
SKA3-204ENST00000462482 IL15RAQ13261 267 aa10.54□□□□□ -0.72
SKA3-204ENST00000462482 MIR17HGQ75NE6 70 aa10.54□□□□□ -0.72
SKA3-204ENST00000462482 NDUFA13Q9P0J0 144 aa10.54□□□□□ -0.72
SKA3-204ENST00000462482 LY96Q9Y6Y9 160 aa10.54□□□□□ -0.72
SKA3-204ENST00000462482 OR7C2O60412 319 aa10.53□□□□□ -0.72
SKA3-204ENST00000462482 PRAF2O60831 178 aa10.53□□□□□ -0.72
SKA3-204ENST00000462482 OR10J4P0C629 311 aa10.53□□□□□ -0.72
SKA3-204ENST00000462482 NHLH2Q02577 135 aa10.53□□□□□ -0.72
SKA3-204ENST00000462482 PRR9Q5T870 116 aa10.53□□□□□ -0.72
SKA3-204ENST00000462482 LYPD5Q6UWN5 251 aa10.53□□□□□ -0.72
SKA3-204ENST00000462482 FAM167A-AS1Q96KT0 104 aa10.53□□□□□ -0.72
SKA3-204ENST00000462482 TRGV11A0A075B6L2 103 aa10.52□□□□□ -0.73
SKA3-204ENST00000462482 K7EP13 123 aa10.52□□□□□ -0.73
SKA3-204ENST00000462482 ORM1P02763 201 aa10.52□□□□□ -0.73
SKA3-204ENST00000462482 EVI2AP22794 236 aa10.52□□□□□ -0.73
SKA3-204ENST00000462482 FHL2Q14192 279 aa10.52□□□□□ -0.73
SKA3-204ENST00000462482 MUC21Q5SSG8 566 aa10.52□□□□□ -0.73
SKA3-204ENST00000462482 FAM159AQ6UWV7 190 aa10.52□□□□□ -0.73
SKA3-204ENST00000462482 Q6ZRN7 208 aaPredicted RBP10.52□□□□□ -0.73
SKA3-204ENST00000462482 LYPD1Q8N2G4 141 aa10.52□□□□□ -0.73
SKA3-204ENST00000462482 Q8TAT8 98 aa10.52□□□□□ -0.73
SKA3-204ENST00000462482 SPXQ9BT56 116 aa10.52□□□□□ -0.73
SKA3-204ENST00000462482 RBAKDNA6NC62 111 aa10.51□□□□□ -0.73
SKA3-204ENST00000462482 RANP62826 216 aaKnown RBP10.51□□□□□ -0.73
SKA3-204ENST00000462482 CYCSP99999 105 aaKnown RBP10.51□□□□□ -0.73
SKA3-204ENST00000462482 LRRC37A5PQ49AS3 106 aa10.51□□□□□ -0.73
SKA3-204ENST00000462482 FXYD5Q96DB9 178 aa10.51□□□□□ -0.73
SKA3-204ENST00000462482 TXNDC17Q9BRA2 123 aa10.51□□□□□ -0.73
SKA3-204ENST00000462482 WDR61Q9GZS3 305 aaKnown RBP10.51□□□□□ -0.73
SKA3-204ENST00000462482 TAS2R45P59539 299 aa10.5□□□□□ -0.73
SKA3-204ENST00000462482 UBE2L3P68036 154 aaKnown RBP10.5□□□□□ -0.73
SKA3-204ENST00000462482 ZNF266Q14584 549 aa10.5□□□□□ -0.73
SKA3-204ENST00000462482 ENKURQ8TC29 256 aa10.5□□□□□ -0.73
SKA3-204ENST00000462482 PHYHIPLQ96FC7 376 aa10.5□□□□□ -0.73
SKA3-204ENST00000462482 LENEPQ9Y5L5 61 aa10.5□□□□□ -0.73
SKA3-204ENST00000462482 DNAH5Q8TE73 4624 aa10.49□□□□□ -0.73
SKA3-204ENST00000462482 C9JCJ5 164 aa10.49□□□□□ -0.73
SKA3-204ENST00000462482 GYPEP15421 78 aa10.49□□□□□ -0.73
SKA3-204ENST00000462482 TMEM183BQ1AE95 376 aa10.49□□□□□ -0.73
SKA3-204ENST00000462482 Q6ZQT7 251 aa10.49□□□□□ -0.73
SKA3-204ENST00000462482 IQCF2Q8IXL9 164 aa10.49□□□□□ -0.73
SKA3-204ENST00000462482 TMEM183AQ8IXX5 376 aa10.49□□□□□ -0.73
SKA3-204ENST00000462482 OR10G4Q8NGN3 311 aa10.49□□□□□ -0.73
SKA3-204ENST00000462482 CMTM2Q8TAZ6 248 aa10.49□□□□□ -0.73
SKA3-204ENST00000462482 NMES1Q9C002 83 aa10.49□□□□□ -0.73
SKA3-204ENST00000462482 MSRB1Q9NZV6 116 aa10.49□□□□□ -0.73
SKA3-204ENST00000462482 K7EQD1 137 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 SIX6O95475 246 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 SFTA3P0C7M3 94 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 KHDC3LQ587J8 217 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 FAM74A1Q5RGS3 127 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 C10orf126Q8N4M7 172 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 SCGB1C1Q8TD33 95 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 RASL10AQ92737 203 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 FRZBQ92765 325 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 ZNF479Q96JC4 524 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 OR5AC2Q9NZP5 309 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 MDFICQ9P1T7 246 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 NAGKQ9UJ70 344 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 TNFRSF18Q9Y5U5 241 aa10.48□□□□□ -0.73
SKA3-204ENST00000462482 A0A087WTM6 91 aa10.47□□□□□ -0.73
SKA3-204ENST00000462482 ASAH1Q13510 395 aa10.47□□□□□ -0.73
SKA3-204ENST00000462482 FFAR4Q5NUL3 377 aa10.47□□□□□ -0.73
SKA3-204ENST00000462482 Q6AWC8 147 aa10.47□□□□□ -0.73
SKA3-204ENST00000462482 SH2D6Q7Z4S9 175 aa10.47□□□□□ -0.73
SKA3-204ENST00000462482 OR4C5Q8NGB2 326 aa10.47□□□□□ -0.73
SKA3-204ENST00000462482 S100ZQ8WXG8 99 aa10.47□□□□□ -0.73
SKA3-204ENST00000462482 HYLS1Q96M11 299 aa10.47□□□□□ -0.73
SKA3-204ENST00000462482 ATP5SQ99766 215 aa10.47□□□□□ -0.73
SKA3-204ENST00000462482 TRAV4A0A0B4J268 109 aa10.46□□□□□ -0.73
SKA3-204ENST00000462482 DIRC3C9JPN6 131 aa10.46□□□□□ -0.73
SKA3-204ENST00000462482 PET100P0DJ07 73 aa10.46□□□□□ -0.73
SKA3-204ENST00000462482 INAFM2P0DMQ5 153 aa10.46□□□□□ -0.73
SKA3-204ENST00000462482 TMED6Q8WW62 240 aa10.46□□□□□ -0.73
SKA3-204ENST00000462482 RPH3ALQ9UNE2 315 aa10.46□□□□□ -0.73
SKA3-204ENST00000462482 PSCAO43653 123 aa10.45□□□□□ -0.74
SKA3-204ENST00000462482 CRYGDP07320 174 aa10.45□□□□□ -0.74
SKA3-204ENST00000462482 DNAH10OSP0CZ25 163 aa10.45□□□□□ -0.74
SKA3-204ENST00000462482 FUSP35637 526 aaKnown RBP eCLIP10.45□□□□□ -0.74
SKA3-204ENST00000462482 LINC00299Q6ZSB3 139 aa10.45□□□□□ -0.74
SKA3-204ENST00000462482 WFDC10BQ8IUB3 73 aa10.45□□□□□ -0.74
SKA3-204ENST00000462482 NHLRC2Q8NBF2 726 aa10.45□□□□□ -0.74
SKA3-204ENST00000462482 OTORQ9NRC9 128 aa10.45□□□□□ -0.74
SKA3-204ENST00000462482 APOBP04114 4563 aaKnown RBP10.45□□□□□ -0.74
SKA3-204ENST00000462482 TRAV21A0A0B4J279 112 aa10.44□□□□□ -0.74
SKA3-204ENST00000462482 M0R2P5 195 aa10.44□□□□□ -0.74
SKA3-204ENST00000462482 PPT1P50897 306 aa10.44□□□□□ -0.74
SKA3-204ENST00000462482 BOLA1Q9Y3E2 137 aa10.44□□□□□ -0.74
SKA3-204ENST00000462482 A0A1W2PPV4 95 aa10.43□□□□□ -0.74
SKA3-204ENST00000462482 PGPA6NDG6 321 aa10.43□□□□□ -0.74
SKA3-204ENST00000462482 H0YIZ8 118 aa10.43□□□□□ -0.74
SKA3-204ENST00000462482 GCSHP23434 173 aa10.43□□□□□ -0.74
SKA3-204ENST00000462482 TDRG1Q3Y452 100 aa10.43□□□□□ -0.74
SKA3-204ENST00000462482 PPP1R1CQ8WVI7 109 aa10.43□□□□□ -0.74
SKA3-204ENST00000462482 KCNS1Q96KK3 526 aa10.43□□□□□ -0.74
SKA3-204ENST00000462482 SDF2L1Q9HCN8 221 aa10.43□□□□□ -0.74
SKA3-204ENST00000462482 MBD2Q9UBB5 411 aa10.43□□□□□ -0.74
SKA3-204ENST00000462482 HSPB11Q9Y547 144 aa10.43□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.5 ms