RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 IGHV3-74A0A0B4J1X5 117 aa14.21□□□□□ -0.13
HPS3-204ENST00000462030 PSMG4Q5JS54 123 aa14.21□□□□□ -0.13
HPS3-204ENST00000462030 SVEP1Q4LDE5 3571 aa14.21□□□□□ -0.14
HPS3-204ENST00000462030 M0R1W7 72 aa14.2□□□□□ -0.14
HPS3-204ENST00000462030 BUB3O43684 328 aa14.2□□□□□ -0.14
HPS3-204ENST00000462030 SCGB2A1O75556 95 aa14.2□□□□□ -0.14
HPS3-204ENST00000462030 Q6ZQT7 251 aa14.2□□□□□ -0.14
HPS3-204ENST00000462030 VMO1Q7Z5L0 202 aa14.2□□□□□ -0.14
HPS3-204ENST00000462030 TM2D2Q9BX73 214 aa14.2□□□□□ -0.14
HPS3-204ENST00000462030 AGPAT4-IT1Q9H0P7 198 aa14.2□□□□□ -0.14
HPS3-204ENST00000462030 ZFAND3Q9H8U3 227 aa14.2□□□□□ -0.14
HPS3-204ENST00000462030 SMPXQ9UHP9 88 aa14.2□□□□□ -0.14
HPS3-204ENST00000462030 RELNP78509 3460 aa14.2□□□□□ -0.14
HPS3-204ENST00000462030 ANKHD1Q8IWZ3 2542 aaKnown RBP14.2□□□□□ -0.14
HPS3-204ENST00000462030 FAM90A27PA6NNH2 459 aa14.2□□□□□ -0.14
HPS3-204ENST00000462030 NRACQ8N912 160 aa14.2□□□□□ -0.14
HPS3-204ENST00000462030 AGRNO00468 2067 aa14.2□□□□□ -0.14
HPS3-204ENST00000462030 TMEM11P17152 192 aa14.19□□□□□ -0.14
HPS3-204ENST00000462030 C15orf32Q32M92 178 aa14.19□□□□□ -0.14
HPS3-204ENST00000462030 UFC1Q9Y3C8 167 aa14.19□□□□□ -0.14
HPS3-204ENST00000462030 IGHV7-4-1A0A0J9YVY3 117 aa14.19□□□□□ -0.14
HPS3-204ENST00000462030 IGHV3-49A0A0A0MS15 119 aa14.18□□□□□ -0.14
HPS3-204ENST00000462030 RBAKDNA6NC62 111 aa14.18□□□□□ -0.14
HPS3-204ENST00000462030 EFNA4P52798 201 aa14.18□□□□□ -0.14
HPS3-204ENST00000462030 LAGE3Q14657 143 aa14.18□□□□□ -0.14
HPS3-204ENST00000462030 ZNF502Q8TBZ5 544 aa14.18□□□□□ -0.14
HPS3-204ENST00000462030 CLEC3BP05452 202 aa14.17□□□□□ -0.14
HPS3-204ENST00000462030 ECSCRQ19T08 205 aa14.17□□□□□ -0.14
HPS3-204ENST00000462030 CCDC144NLQ6NUI1 221 aa14.17□□□□□ -0.14
HPS3-204ENST00000462030 MYOZ3Q8TDC0 251 aa14.17□□□□□ -0.14
HPS3-204ENST00000462030 CACNA1BQ00975 2339 aa14.17□□□□□ -0.14
HPS3-204ENST00000462030 CLPSL1A2RUU4 121 aa14.17□□□□□ -0.14
HPS3-204ENST00000462030 HLA-DRB4P13762 266 aa14.17□□□□□ -0.14
HPS3-204ENST00000462030 Q8N9W7 124 aa14.17□□□□□ -0.14
HPS3-204ENST00000462030 HLA-DRB4X5D2U9 266 aa14.17□□□□□ -0.14
HPS3-204ENST00000462030 PTPRZ1P23471 2315 aaPredicted RBP14.16□□□□□ -0.14
HPS3-204ENST00000462030 IGLL5B9A064 214 aa14.16□□□□□ -0.14
HPS3-204ENST00000462030 E9PLD3 99 aa14.16□□□□□ -0.14
HPS3-204ENST00000462030 TIMD4Q96H15 378 aa14.16□□□□□ -0.14
HPS3-204ENST00000462030 VKORC1Q9BQB6 163 aa14.16□□□□□ -0.14
HPS3-204ENST00000462030 TRAV8-2A0A0B4J237 113 aa14.16□□□□□ -0.14
HPS3-204ENST00000462030 EBI3Q14213 229 aa14.16□□□□□ -0.14
HPS3-204ENST00000462030 SLC50A1Q9BRV3 221 aa14.16□□□□□ -0.14
HPS3-204ENST00000462030 A0A087WX48 190 aa14.15□□□□□ -0.14
HPS3-204ENST00000462030 ZNF207O43670 478 aaKnown RBP14.15□□□□□ -0.14
HPS3-204ENST00000462030 MSRB2Q9Y3D2 182 aa14.15□□□□□ -0.14
HPS3-204ENST00000462030 MED13LQ71F56 2210 aa14.15□□□□□ -0.14
HPS3-204ENST00000462030 SRSF1Q07955 248 aaKnown RBP eCLIP14.14□□□□□ -0.15
HPS3-204ENST00000462030 WFDC2Q14508 124 aa14.14□□□□□ -0.15
HPS3-204ENST00000462030 TMEM78Q5T7P6 136 aa14.14□□□□□ -0.15
HPS3-204ENST00000462030 FAM110DQ8TAY7 271 aaPredicted RBP14.14□□□□□ -0.15
HPS3-204ENST00000462030 PRSS47A8MTI9 375 aa14.14□□□□□ -0.15
HPS3-204ENST00000462030 CLEC19AQ6UXS0 136 aa14.14□□□□□ -0.15
HPS3-204ENST00000462030 ZNF479Q96JC4 524 aa14.14□□□□□ -0.15
HPS3-204ENST00000462030 CCDC140Q96MF4 163 aa14.14□□□□□ -0.15
HPS3-204ENST00000462030 TLN1Q9Y490 2541 aaKnown RBP14.13□□□□□ -0.15
HPS3-204ENST00000462030 ATP6V0E1O15342 81 aa14.13□□□□□ -0.15
HPS3-204ENST00000462030 C12orf74Q32Q52 190 aa14.13□□□□□ -0.15
HPS3-204ENST00000462030 SPANXN1Q5VSR9 72 aa14.13□□□□□ -0.15
HPS3-204ENST00000462030 HRNRQ86YZ3 2850 aaPredicted RBP14.13□□□□□ -0.15
HPS3-204ENST00000462030 CEP295Q9C0D2 2601 aa14.13□□□□□ -0.15
HPS3-204ENST00000462030 GOSR1O95249 250 aa14.13□□□□□ -0.15
HPS3-204ENST00000462030 RAB9AP51151 201 aa14.13□□□□□ -0.15
HPS3-204ENST00000462030 FOXI2Q6ZQN5 318 aa14.13□□□□□ -0.15
HPS3-204ENST00000462030 H3BVH4 76 aa14.12□□□□□ -0.15
HPS3-204ENST00000462030 H3BMG7 143 aa14.12□□□□□ -0.15
HPS3-204ENST00000462030 TCF15Q12870 199 aa14.12□□□□□ -0.15
HPS3-204ENST00000462030 C8orf86Q6ZUL3 223 aa14.12□□□□□ -0.15
HPS3-204ENST00000462030 HIST1H4GQ99525 98 aa14.12□□□□□ -0.15
HPS3-204ENST00000462030 SPANXB1Q9NS25 103 aaPredicted RBP14.12□□□□□ -0.15
HPS3-204ENST00000462030 G3V318 75 aa14.11□□□□□ -0.15
HPS3-204ENST00000462030 SPRY2O43597 315 aa14.11□□□□□ -0.15
HPS3-204ENST00000462030 ZFP36P26651 326 aaKnown RBP14.11□□□□□ -0.15
HPS3-204ENST00000462030 PRR9Q5T870 116 aa14.11□□□□□ -0.15
HPS3-204ENST00000462030 SAMD13Q5VXD3 122 aa14.11□□□□□ -0.15
HPS3-204ENST00000462030 AMTNQ6UX39 209 aa14.11□□□□□ -0.15
HPS3-204ENST00000462030 KLK15Q9H2R5 256 aa14.11□□□□□ -0.15
HPS3-204ENST00000462030 OOSP1A8MZH6 123 aa14.1□□□□□ -0.15
HPS3-204ENST00000462030 CDSNQ15517 529 aa14.1□□□□□ -0.15
HPS3-204ENST00000462030 TAL2Q16559 108 aa14.1□□□□□ -0.15
HPS3-204ENST00000462030 MTURNQ8N3F0 131 aa14.1□□□□□ -0.15
HPS3-204ENST00000462030 GTSF1LQ9H1H1 148 aa14.1□□□□□ -0.15
HPS3-204ENST00000462030 LINC01548A6NM66 108 aa14.1□□□□□ -0.15
HPS3-204ENST00000462030 PLNP26678 52 aa14.1□□□□□ -0.15
HPS3-204ENST00000462030 MINOS1Q5TGZ0 78 aa14.1□□□□□ -0.15
HPS3-204ENST00000462030 MINOS1-NBL1R4GNA1 71 aa14.1□□□□□ -0.15
HPS3-204ENST00000462030 TRBV7-3A0A075B6L6 115 aa14.09□□□□□ -0.15
HPS3-204ENST00000462030 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.09□□□□□ -0.15
HPS3-204ENST00000462030 SMIM2Q9BVW6 85 aa14.09□□□□□ -0.15
HPS3-204ENST00000462030 ASH1LQ9NR48 2969 aaKnown RBP14.09□□□□□ -0.15
HPS3-204ENST00000462030 IGHV4-4A0A075B6R2 117 aa14.09□□□□□ -0.15
HPS3-204ENST00000462030 J3KRW8 73 aa14.09□□□□□ -0.15
HPS3-204ENST00000462030 SH2D6Q7Z4S9 175 aa14.09□□□□□ -0.15
HPS3-204ENST00000462030 TSSC4Q9Y5U2 329 aaPredicted RBP14.09□□□□□ -0.15
HPS3-204ENST00000462030 F8VRH5 84 aa14.08□□□□□ -0.15
HPS3-204ENST00000462030 F8W1H4 67 aa14.08□□□□□ -0.15
HPS3-204ENST00000462030 IGF1P05019 195 aa14.08□□□□□ -0.15
HPS3-204ENST00000462030 AZU1P20160 251 aa14.08□□□□□ -0.15
HPS3-204ENST00000462030 C9orf47Q6ZRZ4 202 aa14.08□□□□□ -0.15
HPS3-204ENST00000462030 MUC6Q6W4X9 2439 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms