RNA–Protein interactions for RNA: ENST00000461897.5

COL4A6-204, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 1 (best)

Gene COL4A6, Length 1,889 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-204ENST00000461897 CNFNQ9BYD5 112 aa9.6□□□□□ -0.87
COL4A6-204ENST00000461897 THYN1Q9P016 225 aa9.6□□□□□ -0.87
COL4A6-204ENST00000461897 S4R3C0 116 aa9.6□□□□□ -0.87
COL4A6-204ENST00000461897 ITPR3Q14573 2671 aa9.6□□□□□ -0.87
COL4A6-204ENST00000461897 TEX15Q9BXT5 2789 aa9.6□□□□□ -0.87
COL4A6-204ENST00000461897 LINC01546A6NGU7 62 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 D6R8Y8 96 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 SCGB2A1O75556 95 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 IGLC6P0CF74 106 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 FGF6P10767 208 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 S100A7P31151 101 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 IFI27P40305 119 aaPredicted RBP9.59□□□□□ -0.87
COL4A6-204ENST00000461897 WFDC11Q8NEX6 87 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 PRELID3AQ96N28 172 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 ASCL2Q99929 193 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 ITPR2Q14571 2701 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 UNC79Q9P2D8 2635 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 MUC21A0A0G2JKD1 596 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 MUC21A0A140T8X8 626 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 TMEM213A2RRL7 107 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 G3V318 75 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 NCR2O95944 276 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 GPR183P32249 361 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 BMI1P35226 326 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 RBX1P62877 108 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 MUC21Q5SSG8 566 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 MXRA5Q9NR99 2828 aa9.59□□□□□ -0.87
COL4A6-204ENST00000461897 IGHG4P01861 327 aa9.58□□□□□ -0.88
COL4A6-204ENST00000461897 DEFB112Q30KQ8 113 aa9.58□□□□□ -0.88
COL4A6-204ENST00000461897 MRPL51Q4U2R6 128 aaKnown RBP9.58□□□□□ -0.88
COL4A6-204ENST00000461897 ZNF575Q86XF7 245 aa9.58□□□□□ -0.88
COL4A6-204ENST00000461897 RNASE8Q8TDE3 154 aaKnown RBP9.58□□□□□ -0.88
COL4A6-204ENST00000461897 HBDP02042 147 aa9.57□□□□□ -0.88
COL4A6-204ENST00000461897 CTSGP08311 255 aa9.57□□□□□ -0.88
COL4A6-204ENST00000461897 SEC11AP67812 179 aa9.57□□□□□ -0.88
COL4A6-204ENST00000461897 FAM106AQ4KMX7 169 aa9.57□□□□□ -0.88
COL4A6-204ENST00000461897 C19orf54Q5BKX5 351 aa9.57□□□□□ -0.88
COL4A6-204ENST00000461897 AMN1Q8IY45 258 aa9.57□□□□□ -0.88
COL4A6-204ENST00000461897 MCRIP2Q9BUT9 160 aaKnown RBP9.57□□□□□ -0.88
COL4A6-204ENST00000461897 SMAD5-AS1Q9Y6J3 95 aa9.57□□□□□ -0.88
COL4A6-204ENST00000461897 IGKV2-40A0A087WW87 121 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-204ENST00000461897 A0A087X0K7 114 aa9.57□□□□□ -0.88
COL4A6-204ENST00000461897 IGKV2D-40P01614 121 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-204ENST00000461897 CRIP2P52943 208 aaPredicted RBP9.57□□□□□ -0.88
COL4A6-204ENST00000461897 VAMP3Q15836 100 aa9.57□□□□□ -0.88
COL4A6-204ENST00000461897 FER1L6-AS1Q8NA97 138 aa9.57□□□□□ -0.88
COL4A6-204ENST00000461897 OR4C5Q8NGB2 326 aa9.57□□□□□ -0.88
COL4A6-204ENST00000461897 TPPP3Q9BW30 176 aa9.57□□□□□ -0.88
COL4A6-204ENST00000461897 RABAC1Q9UI14 185 aa9.57□□□□□ -0.88
COL4A6-204ENST00000461897 SIVA1O15304 175 aa9.56□□□□□ -0.88
COL4A6-204ENST00000461897 IGHV3-23P01764 117 aa9.56□□□□□ -0.88
COL4A6-204ENST00000461897 IGHV4-59P01825 116 aa9.56□□□□□ -0.88
COL4A6-204ENST00000461897 RAB9AP51151 201 aa9.56□□□□□ -0.88
COL4A6-204ENST00000461897 BOD1L2Q8IYS8 172 aa9.56□□□□□ -0.88
COL4A6-204ENST00000461897 CCDC168Q8NDH2 2452 aa9.56□□□□□ -0.88
COL4A6-204ENST00000461897 PPBPP02775 128 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 CDKN1BP46527 198 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 ZNF80P51504 273 aaPredicted RBP9.55□□□□□ -0.88
COL4A6-204ENST00000461897 PSMG4Q5JS54 123 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 C9orf139Q6ZV77 190 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 LINC00527Q9UJ94 153 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 ANK3Q12955 4377 aaKnown RBP9.55□□□□□ -0.88
COL4A6-204ENST00000461897 TRAV41A0A0B4J266 112 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 RBAKDNA6NC62 111 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 H0Y8G0 127 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 IGHG2P01859 326 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 IGF1P05019 195 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 BLCAPP62952 87 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 C15orf32Q32M92 178 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 LINC01559Q495D7 138 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 ANKRD39Q53RE8 183 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 Q6ZS46 218 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 OR9G4Q8NGQ1 327 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 RNF185Q96GF1 192 aa9.55□□□□□ -0.88
COL4A6-204ENST00000461897 FLNAP21333 2647 aaKnown RBP9.54□□□□□ -0.88
COL4A6-204ENST00000461897 TMSB15BA0A087X1C1 80 aa9.54□□□□□ -0.88
COL4A6-204ENST00000461897 OR2T8A6NH00 312 aa9.54□□□□□ -0.88
COL4A6-204ENST00000461897 NPYP01303 97 aa9.54□□□□□ -0.88
COL4A6-204ENST00000461897 TMEM97Q5BJF2 176 aa9.54□□□□□ -0.88
COL4A6-204ENST00000461897 OR8A1Q8NGG7 326 aa9.54□□□□□ -0.88
COL4A6-204ENST00000461897 VGLL1Q99990 258 aa9.54□□□□□ -0.88
COL4A6-204ENST00000461897 PEF1Q9UBV8 284 aaKnown RBP9.54□□□□□ -0.88
COL4A6-204ENST00000461897 LOC389332A0A1B0GUA5 103 aa9.53□□□□□ -0.88
COL4A6-204ENST00000461897 CKS2P33552 79 aa9.53□□□□□ -0.88
COL4A6-204ENST00000461897 ZNF502Q8TBZ5 544 aa9.53□□□□□ -0.88
COL4A6-204ENST00000461897 IFI27L1Q96BM0 104 aa9.53□□□□□ -0.88
COL4A6-204ENST00000461897 ZFAND3Q9H8U3 227 aa9.53□□□□□ -0.88
COL4A6-204ENST00000461897 FABP5P3A8MUU1 101 aa9.53□□□□□ -0.88
COL4A6-204ENST00000461897 CCDC140Q96MF4 163 aa9.53□□□□□ -0.88
COL4A6-204ENST00000461897 SMAD7O15105 426 aaKnown RBP9.52□□□□□ -0.89
COL4A6-204ENST00000461897 CACNG7P62955 275 aa9.52□□□□□ -0.89
COL4A6-204ENST00000461897 FOXE3Q13461 319 aa9.52□□□□□ -0.89
COL4A6-204ENST00000461897 TWIST1Q15672 202 aa9.52□□□□□ -0.89
COL4A6-204ENST00000461897 Q8TAT8 98 aa9.52□□□□□ -0.89
COL4A6-204ENST00000461897 FOXC2Q99958 501 aa9.52□□□□□ -0.89
COL4A6-204ENST00000461897 TIMM8BQ9Y5J9 83 aaPredicted RBP9.52□□□□□ -0.89
COL4A6-204ENST00000461897 BUB3O43684 328 aa9.51□□□□□ -0.89
COL4A6-204ENST00000461897 PRB4P10163 310 aaPredicted RBP9.51□□□□□ -0.89
COL4A6-204ENST00000461897 PPIFP30405 207 aaKnown RBP9.51□□□□□ -0.89
COL4A6-204ENST00000461897 HSD52Q0P140 79 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms