RNA–Protein interactions for RNA: ENST00000461553.1

USP4-206, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 544 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-206ENST00000461553 SPINK4O60575 86 aa9.69□□□□□ -0.86
USP4-206ENST00000461553 ACOT6Q3I5F7 207 aaPredicted RBP9.69□□□□□ -0.86
USP4-206ENST00000461553 FAM74A1Q5RGS3 127 aa9.69□□□□□ -0.86
USP4-206ENST00000461553 CMTM2Q8TAZ6 248 aa9.69□□□□□ -0.86
USP4-206ENST00000461553 UPK3BQ9BT76 320 aa9.69□□□□□ -0.86
USP4-206ENST00000461553 KLF12Q9Y4X4 402 aa9.69□□□□□ -0.86
USP4-206ENST00000461553 ALG5Q9Y673 324 aa9.69□□□□□ -0.86
USP4-206ENST00000461553 A0A1W2PPV4 95 aa9.68□□□□□ -0.86
USP4-206ENST00000461553 ZNF266Q14584 549 aa9.68□□□□□ -0.86
USP4-206ENST00000461553 PQLC2Q6ZP29 291 aa9.68□□□□□ -0.86
USP4-206ENST00000461553 ST6GAL2Q96JF0 529 aa9.68□□□□□ -0.86
USP4-206ENST00000461553 HYLS1Q96M11 299 aa9.68□□□□□ -0.86
USP4-206ENST00000461553 Q9H8V8 135 aa9.68□□□□□ -0.86
USP4-206ENST00000461553 OTORQ9NRC9 128 aa9.68□□□□□ -0.86
USP4-206ENST00000461553 MRPL16Q9NX20 251 aaKnown RBP9.68□□□□□ -0.86
USP4-206ENST00000461553 TP53TG3Q9ULZ0 132 aa9.68□□□□□ -0.86
USP4-206ENST00000461553 RPH3ALQ9UNE2 315 aa9.68□□□□□ -0.86
USP4-206ENST00000461553 MRPS16Q9Y3D3 137 aaKnown RBP9.68□□□□□ -0.86
USP4-206ENST00000461553 LRP1BQ9NZR2 4599 aa9.68□□□□□ -0.86
USP4-206ENST00000461553 DIRC3C9JPN6 131 aa9.67□□□□□ -0.86
USP4-206ENST00000461553 PTTG1O95997 202 aa9.67□□□□□ -0.86
USP4-206ENST00000461553 MUC21Q5SSG8 566 aa9.67□□□□□ -0.86
USP4-206ENST00000461553 WFDC1Q9HC57 220 aa9.67□□□□□ -0.86
USP4-206ENST00000461553 LENEPQ9Y5L5 61 aa9.67□□□□□ -0.86
USP4-206ENST00000461553 TRGV11A0A075B6L2 103 aa9.66□□□□□ -0.86
USP4-206ENST00000461553 EIF3GO75821 320 aaKnown RBP eCLIP9.66□□□□□ -0.86
USP4-206ENST00000461553 IGHV3-53P01767 116 aa9.66□□□□□ -0.86
USP4-206ENST00000461553 RAB2AP61019 212 aa9.66□□□□□ -0.86
USP4-206ENST00000461553 TNP2Q05952 138 aa9.66□□□□□ -0.86
USP4-206ENST00000461553 ESRGQ1W209 222 aa9.66□□□□□ -0.86
USP4-206ENST00000461553 Q6AWC8 147 aa9.66□□□□□ -0.86
USP4-206ENST00000461553 Q6ZQT7 251 aa9.66□□□□□ -0.86
USP4-206ENST00000461553 ZNF575Q86XF7 245 aa9.66□□□□□ -0.86
USP4-206ENST00000461553 TMED6Q8WW62 240 aa9.66□□□□□ -0.86
USP4-206ENST00000461553 VSIG2Q96IQ7 327 aa9.66□□□□□ -0.86
USP4-206ENST00000461553 ICOSQ9Y6W8 199 aa9.66□□□□□ -0.86
USP4-206ENST00000461553 A0A096LPF7 62 aa9.65□□□□□ -0.86
USP4-206ENST00000461553 A0A1W2PPQ1 181 aa9.65□□□□□ -0.86
USP4-206ENST00000461553 PAX4O43316 350 aa9.65□□□□□ -0.86
USP4-206ENST00000461553 CDC34P49427 236 aaPredicted RBP9.65□□□□□ -0.86
USP4-206ENST00000461553 FAM159AQ6UWV7 190 aa9.65□□□□□ -0.86
USP4-206ENST00000461553 NAGKQ9UJ70 344 aa9.65□□□□□ -0.86
USP4-206ENST00000461553 HSPG2P98160 4391 aa9.65□□□□□ -0.86
USP4-206ENST00000461553 PGPA6NDG6 321 aa9.64□□□□□ -0.87
USP4-206ENST00000461553 TMEM183BQ1AE95 376 aa9.64□□□□□ -0.87
USP4-206ENST00000461553 GOLT1AQ6ZVE7 132 aa9.64□□□□□ -0.87
USP4-206ENST00000461553 TMEM183AQ8IXX5 376 aa9.64□□□□□ -0.87
USP4-206ENST00000461553 HSD17B11Q8NBQ5 300 aa9.64□□□□□ -0.87
USP4-206ENST00000461553 OR10G4Q8NGN3 311 aa9.64□□□□□ -0.87
USP4-206ENST00000461553 OR10G9Q8NGN4 311 aa9.64□□□□□ -0.87
USP4-206ENST00000461553 OR10G7Q8NGN6 311 aa9.64□□□□□ -0.87
USP4-206ENST00000461553 MED28Q9H204 178 aa9.64□□□□□ -0.87
USP4-206ENST00000461553 PRO0255Q9UI72 69 aa9.64□□□□□ -0.87
USP4-206ENST00000461553 DNAH5Q8TE73 4624 aa9.64□□□□□ -0.87
USP4-206ENST00000461553 C16orf90A8MZG2 172 aa9.63□□□□□ -0.87
USP4-206ENST00000461553 HMGB3O15347 200 aaKnown RBP9.63□□□□□ -0.87
USP4-206ENST00000461553 ARL14EPLP0DKL9 152 aa9.63□□□□□ -0.87
USP4-206ENST00000461553 SLAQ13239 276 aa9.63□□□□□ -0.87
USP4-206ENST00000461553 OR2G3Q8NGZ4 309 aa9.63□□□□□ -0.87
USP4-206ENST00000461553 AQP10Q96PS8 301 aa9.63□□□□□ -0.87
USP4-206ENST00000461553 KRTAP1-5Q9BYS1 174 aa9.63□□□□□ -0.87
USP4-206ENST00000461553 TRGV4A0A0C4DH28 118 aa9.62□□□□□ -0.87
USP4-206ENST00000461553 F6UZH7 168 aa9.62□□□□□ -0.87
USP4-206ENST00000461553 ARL6IP6Q8N6S5 226 aa9.62□□□□□ -0.87
USP4-206ENST00000461553 PCNPQ8WW12 178 aaKnown RBP9.62□□□□□ -0.87
USP4-206ENST00000461553 C8orf49Q96NF6 230 aa9.62□□□□□ -0.87
USP4-206ENST00000461553 SPXQ9BT56 116 aa9.62□□□□□ -0.87
USP4-206ENST00000461553 NDFIP1Q9BT67 221 aa9.62□□□□□ -0.87
USP4-206ENST00000461553 PSMG3Q9BT73 122 aaPredicted RBP9.62□□□□□ -0.87
USP4-206ENST00000461553 MDFICQ9P1T7 246 aa9.62□□□□□ -0.87
USP4-206ENST00000461553 TRAV21A0A0B4J279 112 aa9.61□□□□□ -0.87
USP4-206ENST00000461553 SERTM2A0A1B0GWG4 89 aa9.61□□□□□ -0.87
USP4-206ENST00000461553 STAG3L2P0CL84 134 aa9.61□□□□□ -0.87
USP4-206ENST00000461553 STAG3L3P0CL85 134 aa9.61□□□□□ -0.87
USP4-206ENST00000461553 BTF3P20290 206 aaKnown RBP9.61□□□□□ -0.87
USP4-206ENST00000461553 CRYBA4P53673 196 aa9.61□□□□□ -0.87
USP4-206ENST00000461553 GNG5P63218 68 aa9.61□□□□□ -0.87
USP4-206ENST00000461553 TDRG1Q3Y452 100 aa9.61□□□□□ -0.87
USP4-206ENST00000461553 ASB13Q8WXK3 278 aa9.61□□□□□ -0.87
USP4-206ENST00000461553 KRTAP17-1Q9BYP8 105 aa9.61□□□□□ -0.87
USP4-206ENST00000461553 TREM1Q9NP99 234 aa9.61□□□□□ -0.87
USP4-206ENST00000461553 HHLA3Q9XRX5 114 aa9.61□□□□□ -0.87
USP4-206ENST00000461553 APOBP04114 4563 aaKnown RBP9.61□□□□□ -0.87
USP4-206ENST00000461553 TRAV8-1A0A0A6YYK1 113 aa9.6□□□□□ -0.87
USP4-206ENST00000461553 K7EQM0 130 aa9.6□□□□□ -0.87
USP4-206ENST00000461553 SIVA1O15304 175 aa9.6□□□□□ -0.87
USP4-206ENST00000461553 NXPH4O95158 308 aa9.6□□□□□ -0.87
USP4-206ENST00000461553 MBP02144 154 aa9.6□□□□□ -0.87
USP4-206ENST00000461553 GIPP09681 153 aaPredicted RBP9.6□□□□□ -0.87
USP4-206ENST00000461553 SFTA3P0C7M3 94 aa9.6□□□□□ -0.87
USP4-206ENST00000461553 ATP6V0CP27449 155 aa9.6□□□□□ -0.87
USP4-206ENST00000461553 FHL2Q14192 279 aa9.6□□□□□ -0.87
USP4-206ENST00000461553 MRPL23Q16540 153 aaKnown RBP9.6□□□□□ -0.87
USP4-206ENST00000461553 C5orf17Q8NAS9 161 aa9.6□□□□□ -0.87
USP4-206ENST00000461553 SDF2L1Q9HCN8 221 aa9.6□□□□□ -0.87
USP4-206ENST00000461553 ABCA13Q86UQ4 5058 aa9.59□□□□□ -0.87
USP4-206ENST00000461553 GCHFRP30047 84 aa9.59□□□□□ -0.87
USP4-206ENST00000461553 SRIP30626 198 aa9.59□□□□□ -0.87
USP4-206ENST00000461553 SERF2P84101 59 aa9.59□□□□□ -0.87
USP4-206ENST00000461553 NEGR1Q7Z3B1 354 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms