RNA–Protein interactions for RNA: ENST00000460801.5

PTPRN-210, Transcript of protein tyrosine phosphatase, receptor type N, humanhuman

TSL 2

Gene PTPRN, Length 2,239 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRN-210ENST00000460801 MXRA5Q9NR99 2828 aa10.58□□□□□ -0.72
PTPRN-210ENST00000460801 IGKV3D-20A0A0C4DH25 116 aa10.57□□□□□ -0.72
PTPRN-210ENST00000460801 MUC21A0A0G2JKD1 596 aa10.57□□□□□ -0.72
PTPRN-210ENST00000460801 MUC21A0A140T8X8 626 aa10.57□□□□□ -0.72
PTPRN-210ENST00000460801 FAM106AQ4KMX7 169 aa10.57□□□□□ -0.72
PTPRN-210ENST00000460801 MUC21Q5SSG8 566 aa10.57□□□□□ -0.72
PTPRN-210ENST00000460801 CYB5R2Q6BCY4 276 aa10.57□□□□□ -0.72
PTPRN-210ENST00000460801 EBLN2Q6P2I7 272 aa10.57□□□□□ -0.72
PTPRN-210ENST00000460801 C11orf21Q9P2W6 132 aa10.57□□□□□ -0.72
PTPRN-210ENST00000460801 TEX15Q9BXT5 2789 aa10.57□□□□□ -0.72
PTPRN-210ENST00000460801 C2orf70A6NJV1 201 aa10.57□□□□□ -0.72
PTPRN-210ENST00000460801 SSTP61278 116 aa10.57□□□□□ -0.72
PTPRN-210ENST00000460801 C20orf144Q9BQM9 153 aa10.57□□□□□ -0.72
PTPRN-210ENST00000460801 DOPEY2Q9Y3R5 2298 aa10.56□□□□□ -0.72
PTPRN-210ENST00000460801 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
PTPRN-210ENST00000460801 OVOL1O14753 267 aa10.56□□□□□ -0.72
PTPRN-210ENST00000460801 TWIST1Q15672 202 aa10.56□□□□□ -0.72
PTPRN-210ENST00000460801 AMN1Q8IY45 258 aa10.56□□□□□ -0.72
PTPRN-210ENST00000460801 LINC00477Q96M19 166 aa10.56□□□□□ -0.72
PTPRN-210ENST00000460801 VAMP8Q9BV40 100 aa10.56□□□□□ -0.72
PTPRN-210ENST00000460801 ZNF702PQ9H963 129 aa10.56□□□□□ -0.72
PTPRN-210ENST00000460801 HOXA3O43365 443 aaPredicted RBP10.55□□□□□ -0.72
PTPRN-210ENST00000460801 RAB4AP20338 218 aa10.55□□□□□ -0.72
PTPRN-210ENST00000460801 RPL11P62913 178 aaKnown RBP10.55□□□□□ -0.72
PTPRN-210ENST00000460801 PMCHL1Q16048 86 aa10.55□□□□□ -0.72
PTPRN-210ENST00000460801 TMEM191AQ9H0A3 160 aa10.55□□□□□ -0.72
PTPRN-210ENST00000460801 CHD6Q8TD26 2715 aa10.55□□□□□ -0.72
PTPRN-210ENST00000460801 D6R8Y8 96 aa10.54□□□□□ -0.72
PTPRN-210ENST00000460801 RPLP1P05386 114 aaKnown RBP10.54□□□□□ -0.72
PTPRN-210ENST00000460801 CSN3P07498 182 aa10.54□□□□□ -0.72
PTPRN-210ENST00000460801 BTF3P20290 206 aaKnown RBP10.54□□□□□ -0.72
PTPRN-210ENST00000460801 FOXE3Q13461 319 aa10.54□□□□□ -0.72
PTPRN-210ENST00000460801 MRPL51Q4U2R6 128 aaKnown RBP10.54□□□□□ -0.72
PTPRN-210ENST00000460801 OR10J6PQ8NGY7 276 aa10.54□□□□□ -0.72
PTPRN-210ENST00000460801 MYOZ3Q8TDC0 251 aa10.54□□□□□ -0.72
PTPRN-210ENST00000460801 MSRB1Q9NZV6 116 aa10.54□□□□□ -0.72
PTPRN-210ENST00000460801 PAM16Q9Y3D7 125 aa10.54□□□□□ -0.72
PTPRN-210ENST00000460801 ELANEP08246 267 aa10.54□□□□□ -0.72
PTPRN-210ENST00000460801 OR5AL1P0C617 328 aa10.54□□□□□ -0.72
PTPRN-210ENST00000460801 EDN2P20800 178 aa10.54□□□□□ -0.72
PTPRN-210ENST00000460801 ORMDL3Q8N138 153 aa10.54□□□□□ -0.72
PTPRN-210ENST00000460801 UFC1Q9Y3C8 167 aa10.54□□□□□ -0.72
PTPRN-210ENST00000460801 PRR9Q5T870 116 aa10.53□□□□□ -0.72
PTPRN-210ENST00000460801 ZFAND2AQ8N6M9 145 aa10.53□□□□□ -0.72
PTPRN-210ENST00000460801 PRELID3AQ96N28 172 aa10.53□□□□□ -0.72
PTPRN-210ENST00000460801 Q6ZQT7 251 aa10.53□□□□□ -0.72
PTPRN-210ENST00000460801 FAM19A4Q96LR4 140 aa10.53□□□□□ -0.72
PTPRN-210ENST00000460801 CRXO43186 299 aaPredicted RBP10.52□□□□□ -0.73
PTPRN-210ENST00000460801 LEPROTL1O95214 131 aa10.52□□□□□ -0.73
PTPRN-210ENST00000460801 DEFB1P60022 68 aa10.52□□□□□ -0.73
PTPRN-210ENST00000460801 RNF152Q8N8N0 203 aa10.52□□□□□ -0.73
PTPRN-210ENST00000460801 OR8A1Q8NGG7 326 aa10.52□□□□□ -0.73
PTPRN-210ENST00000460801 PRSS3P2Q8NHM4 247 aa10.52□□□□□ -0.73
PTPRN-210ENST00000460801 RNF185Q96GF1 192 aa10.52□□□□□ -0.73
PTPRN-210ENST00000460801 TMEM70Q9BUB7 260 aa10.52□□□□□ -0.73
PTPRN-210ENST00000460801 AP5S1Q9NUS5 200 aa10.52□□□□□ -0.73
PTPRN-210ENST00000460801 TENM4Q6N022 2769 aa10.52□□□□□ -0.73
PTPRN-210ENST00000460801 IGKV3-7A0A075B6H7 116 aa10.52□□□□□ -0.73
PTPRN-210ENST00000460801 LGALS1P09382 135 aaKnown RBP10.52□□□□□ -0.73
PTPRN-210ENST00000460801 ITPR3Q14573 2671 aa10.51□□□□□ -0.73
PTPRN-210ENST00000460801 TRBV7-9A0A0J9YWB2 115 aa10.51□□□□□ -0.73
PTPRN-210ENST00000460801 LINC00173Q6ZV60 143 aa10.51□□□□□ -0.73
PTPRN-210ENST00000460801 Q8N2B8 174 aa10.51□□□□□ -0.73
PTPRN-210ENST00000460801 DCANP1Q8TF63 244 aa10.51□□□□□ -0.73
PTPRN-210ENST00000460801 UBE2E2Q96LR5 201 aa10.51□□□□□ -0.73
PTPRN-210ENST00000460801 SIGLEC8Q9NYZ4 499 aa10.51□□□□□ -0.73
PTPRN-210ENST00000460801 F6UB75 175 aa10.5□□□□□ -0.73
PTPRN-210ENST00000460801 SRD5A1P18405 259 aa10.5□□□□□ -0.73
PTPRN-210ENST00000460801 CKS2P33552 79 aa10.5□□□□□ -0.73
PTPRN-210ENST00000460801 IFI27P40305 119 aaPredicted RBP10.5□□□□□ -0.73
PTPRN-210ENST00000460801 SAMD13Q5VXD3 122 aa10.5□□□□□ -0.73
PTPRN-210ENST00000460801 FA2HQ7L5A8 372 aa10.5□□□□□ -0.73
PTPRN-210ENST00000460801 SPATA12Q7Z6I5 190 aa10.5□□□□□ -0.73
PTPRN-210ENST00000460801 MIEN1Q9BRT3 115 aa10.5□□□□□ -0.73
PTPRN-210ENST00000460801 SELENOKQ9Y6D0 94 aa10.5□□□□□ -0.73
PTPRN-210ENST00000460801 TLN2Q9Y4G6 2542 aa10.5□□□□□ -0.73
PTPRN-210ENST00000460801 SNAI2O43623 268 aa10.5□□□□□ -0.73
PTPRN-210ENST00000460801 APRG1Q8IVJ8 170 aa10.5□□□□□ -0.73
PTPRN-210ENST00000460801 IGHV4-4A0A075B6R2 117 aa10.49□□□□□ -0.73
PTPRN-210ENST00000460801 SYS1-DBNDD2H3BUS1 97 aa10.49□□□□□ -0.73
PTPRN-210ENST00000460801 LGALS9O00182 355 aa10.49□□□□□ -0.73
PTPRN-210ENST00000460801 ID1P41134 155 aa10.49□□□□□ -0.73
PTPRN-210ENST00000460801 SPATA45Q537H7 98 aa10.49□□□□□ -0.73
PTPRN-210ENST00000460801 OR10AG1Q8NH19 301 aa10.49□□□□□ -0.73
PTPRN-210ENST00000460801 TRAV21A0A0B4J279 112 aa10.49□□□□□ -0.73
PTPRN-210ENST00000460801 SMKR1H3BMG3 65 aa10.49□□□□□ -0.73
PTPRN-210ENST00000460801 NPYP01303 97 aa10.49□□□□□ -0.73
PTPRN-210ENST00000460801 PPBPP02775 128 aa10.49□□□□□ -0.73
PTPRN-210ENST00000460801 WFDC11Q8NEX6 87 aa10.49□□□□□ -0.73
PTPRN-210ENST00000460801 IGHV4OR15-8A0A075B7B6 117 aa10.48□□□□□ -0.73
PTPRN-210ENST00000460801 A0A087WW49 117 aa10.48□□□□□ -0.73
PTPRN-210ENST00000460801 LOC389332A0A1B0GUA5 103 aa10.48□□□□□ -0.73
PTPRN-210ENST00000460801 ATOH7Q8N100 152 aa10.48□□□□□ -0.73
PTPRN-210ENST00000460801 HSPB8Q9UJY1 196 aa10.48□□□□□ -0.73
PTPRN-210ENST00000460801 KMT2BQ9UMN6 2715 aaPredicted RBP10.48□□□□□ -0.73
PTPRN-210ENST00000460801 J3KRW8 73 aa10.48□□□□□ -0.73
PTPRN-210ENST00000460801 LBHQ53QV2 105 aaPredicted RBP10.48□□□□□ -0.73
PTPRN-210ENST00000460801 HIST2H2BCQ6DN03 193 aa10.48□□□□□ -0.73
PTPRN-210ENST00000460801 MYO9AB2RTY4 2548 aa10.47□□□□□ -0.73
PTPRN-210ENST00000460801 A0A096LNJ9 63 aa10.47□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms