RNA–Protein interactions for RNA: ENST00000460627.5

CHRD-208, Transcript of chordin, humanhuman

TSL 2

Gene CHRD, Length 4,719 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRD-208ENST00000460627 APOC4P55056 127 aa13.84□□□□□ -0.19
CHRD-208ENST00000460627 FAM104BQ5XKR9 115 aa13.84□□□□□ -0.19
CHRD-208ENST00000460627 TMEM89A2RUT3 159 aa13.83□□□□□ -0.2
CHRD-208ENST00000460627 K7ERU9 68 aa13.83□□□□□ -0.2
CHRD-208ENST00000460627 IGHG2P01859 326 aa13.83□□□□□ -0.2
CHRD-208ENST00000460627 FOXI2Q6ZQN5 318 aa13.83□□□□□ -0.2
CHRD-208ENST00000460627 V9GYV3 84 aa13.83□□□□□ -0.2
CHRD-208ENST00000460627 LRP4O75096 1905 aa13.83□□□□□ -0.2
CHRD-208ENST00000460627 IGKV3D-20A0A0C4DH25 116 aa13.83□□□□□ -0.2
CHRD-208ENST00000460627 TMEM213A2RRL7 107 aa13.83□□□□□ -0.2
CHRD-208ENST00000460627 TEX22C9J3V5 150 aa13.83□□□□□ -0.2
CHRD-208ENST00000460627 TNFRSF6BO95407 300 aa13.83□□□□□ -0.2
CHRD-208ENST00000460627 DNAL4O96015 105 aa13.83□□□□□ -0.2
CHRD-208ENST00000460627 ANXA2RQ3ZCQ2 193 aa13.83□□□□□ -0.2
CHRD-208ENST00000460627 TEX43Q6ZNM6 134 aa13.83□□□□□ -0.2
CHRD-208ENST00000460627 TYMSP04818 313 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 RIPPLY3P57055 190 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 AJUBAQ96IF1 538 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 ANKRD11Q6UB99 2663 aaPredicted RBP13.82□□□□□ -0.2
CHRD-208ENST00000460627 A8MWP6 167 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 VGLL1Q99990 258 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 HIVEP3Q5T1R4 2406 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 KNCNA6PVL3 124 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 PRR31Q5SQ13 230 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 CRIP3Q6Q6R5 217 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 KLK9Q9UKQ9 250 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 SMKR1H3BMG3 65 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 Q0VG73 95 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 C10orf91Q5T1B1 145 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 TMEM158Q8WZ71 300 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 GSN-AS1Q9NRJ2 163 aa13.82□□□□□ -0.2
CHRD-208ENST00000460627 TNFRSF13BO14836 293 aaPredicted RBP13.81□□□□□ -0.2
CHRD-208ENST00000460627 SPAG8Q99932 426 aaPredicted RBP13.81□□□□□ -0.2
CHRD-208ENST00000460627 ARL6IP6Q8N6S5 226 aa13.81□□□□□ -0.2
CHRD-208ENST00000460627 RBAKDNA6NC62 111 aa13.81□□□□□ -0.2
CHRD-208ENST00000460627 ZNF843Q8N446 348 aa13.81□□□□□ -0.2
CHRD-208ENST00000460627 ZC2HC1AQ96GY0 325 aa13.81□□□□□ -0.2
CHRD-208ENST00000460627 MRPL16Q9NX20 251 aaKnown RBP13.81□□□□□ -0.2
CHRD-208ENST00000460627 PLNP26678 52 aa13.8□□□□□ -0.2
CHRD-208ENST00000460627 CD300EQ496F6 205 aaPredicted RBP13.8□□□□□ -0.2
CHRD-208ENST00000460627 C17orf77Q96MU5 243 aa13.8□□□□□ -0.2
CHRD-208ENST00000460627 AGPAT4-IT1Q9H0P7 198 aa13.8□□□□□ -0.2
CHRD-208ENST00000460627 SPXQ9BT56 116 aa13.8□□□□□ -0.2
CHRD-208ENST00000460627 TMEM86BQ8N661 226 aa13.79□□□□□ -0.2
CHRD-208ENST00000460627 TRAV12-2A0A075B6T6 113 aa13.79□□□□□ -0.2
CHRD-208ENST00000460627 ZNF815PA8K554 130 aa13.79□□□□□ -0.2
CHRD-208ENST00000460627 WNK1Q9H4A3 2382 aa13.79□□□□□ -0.2
CHRD-208ENST00000460627 APOMO95445 188 aa13.79□□□□□ -0.2
CHRD-208ENST00000460627 LTAP01374 205 aa13.79□□□□□ -0.2
CHRD-208ENST00000460627 ODF3BA8MYP8 253 aa13.79□□□□□ -0.2
CHRD-208ENST00000460627 PROP1O75360 226 aa13.79□□□□□ -0.2
CHRD-208ENST00000460627 DEFB136Q30KP8 78 aa13.79□□□□□ -0.2
CHRD-208ENST00000460627 NDUFAF3Q9BU61 184 aa13.79□□□□□ -0.2
CHRD-208ENST00000460627 SMIM27A0A1W2PRY6 76 aa13.78□□□□□ -0.2
CHRD-208ENST00000460627 DAD1P61803 113 aa13.78□□□□□ -0.2
CHRD-208ENST00000460627 MORN3Q6PF18 240 aaPredicted RBP13.78□□□□□ -0.2
CHRD-208ENST00000460627 C1orf159Q96HA4 380 aa13.78□□□□□ -0.2
CHRD-208ENST00000460627 GP9P14770 177 aa13.78□□□□□ -0.2
CHRD-208ENST00000460627 PLEKHB2Q96CS7 222 aa13.78□□□□□ -0.2
CHRD-208ENST00000460627 TNCP24821 2201 aa13.78□□□□□ -0.2
CHRD-208ENST00000460627 BUB3O43684 328 aa13.78□□□□□ -0.2
CHRD-208ENST00000460627 A6NDX4 124 aa13.78□□□□□ -0.2
CHRD-208ENST00000460627 C3orf79P0CE67 100 aa13.78□□□□□ -0.2
CHRD-208ENST00000460627 DYNAPQ8N1N2 210 aa13.78□□□□□ -0.2
CHRD-208ENST00000460627 PATE2Q6UY27 113 aa13.77□□□□□ -0.2
CHRD-208ENST00000460627 UBE2DNLQ8IWF7 75 aa13.77□□□□□ -0.2
CHRD-208ENST00000460627 K7EMT4 169 aa13.77□□□□□ -0.21
CHRD-208ENST00000460627 HLA-DMBP28068 263 aa13.77□□□□□ -0.21
CHRD-208ENST00000460627 PRSS57Q6UWY2 283 aa13.77□□□□□ -0.21
CHRD-208ENST00000460627 MYO9AB2RTY4 2548 aa13.77□□□□□ -0.21
CHRD-208ENST00000460627 C11orf71Q6IPW1 123 aa13.77□□□□□ -0.21
CHRD-208ENST00000460627 C18orf32Q8TCD1 76 aa13.77□□□□□ -0.21
CHRD-208ENST00000460627 PHLDA1Q8WV24 401 aaPredicted RBP13.77□□□□□ -0.21
CHRD-208ENST00000460627 P0C879 139 aa13.76□□□□□ -0.21
CHRD-208ENST00000460627 AZU1P20160 251 aa13.76□□□□□ -0.21
CHRD-208ENST00000460627 SRSF2Q01130 221 aaKnown RBP13.76□□□□□ -0.21
CHRD-208ENST00000460627 SYS1-DBNDD2H3BUS1 97 aa13.76□□□□□ -0.21
CHRD-208ENST00000460627 LINC00587B1AMM8 73 aa13.76□□□□□ -0.21
CHRD-208ENST00000460627 C16orf54Q6UWD8 224 aa13.76□□□□□ -0.21
CHRD-208ENST00000460627 Q6ZPA2 131 aa13.76□□□□□ -0.21
CHRD-208ENST00000460627 PYGO2Q9BRQ0 406 aa13.76□□□□□ -0.21
CHRD-208ENST00000460627 SLURP1P55000 103 aa13.75□□□□□ -0.21
CHRD-208ENST00000460627 ZNF48Q96MX3 618 aaPredicted RBP13.75□□□□□ -0.21
CHRD-208ENST00000460627 RBMY1BA6NDE4 496 aaKnown RBP13.75□□□□□ -0.21
CHRD-208ENST00000460627 RBMY1EA6NEQ0 496 aaKnown RBP13.75□□□□□ -0.21
CHRD-208ENST00000460627 RBMY1DP0C7P1 496 aaKnown RBP13.75□□□□□ -0.21
CHRD-208ENST00000460627 RBMY1A1P0DJD3 496 aaKnown RBP13.75□□□□□ -0.21
CHRD-208ENST00000460627 RBMY1CP0DJD4 496 aa13.75□□□□□ -0.21
CHRD-208ENST00000460627 RASL10AQ92737 203 aa13.75□□□□□ -0.21
CHRD-208ENST00000460627 TRBV7-9A0A0J9YWB2 115 aa13.75□□□□□ -0.21
CHRD-208ENST00000460627 COL5A1P20908 1838 aaPredicted RBP13.75□□□□□ -0.21
CHRD-208ENST00000460627 SPTBN4Q9H254 2564 aa13.75□□□□□ -0.21
CHRD-208ENST00000460627 E7EUB6 86 aa13.75□□□□□ -0.21
CHRD-208ENST00000460627 GPHB5Q86YW7 130 aa13.75□□□□□ -0.21
CHRD-208ENST00000460627 C9orf66Q5T8R8 295 aa13.74□□□□□ -0.21
CHRD-208ENST00000460627 F6UB75 175 aa13.74□□□□□ -0.21
CHRD-208ENST00000460627 MEGF9Q9H1U4 602 aa13.74□□□□□ -0.21
CHRD-208ENST00000460627 UTRNP46939 3433 aa13.74□□□□□ -0.21
CHRD-208ENST00000460627 WI2-2373I1.2A0A1W2PRP0 233 aa13.73□□□□□ -0.21
CHRD-208ENST00000460627 MRPL51Q4U2R6 128 aaKnown RBP13.73□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms