RNA–Protein interactions for RNA: ENST00000460112.3

SHROOM4-203, Transcript of shroom family member 4, humanhuman

TSL 5 BASIC

Gene SHROOM4, Length 8,919 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-203ENST00000460112 GATA4P43694 442 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 MST1LQ2TV78 715 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 TMEM105Q8N8V8 129 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 DKK4Q9UBT3 224 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 Q9UFV3 132 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 IGHV1OR15-1A0A075B7D0 117 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 TRAV25A0A0B4J276 109 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 NDUFA4O00483 81 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 GGNQ86UU5 652 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 ZNF837Q96EG3 531 aaPredicted RBP7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 PRSS29PA6NIE9 313 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 SYNJ2BPP57105 145 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 KLRD1Q13241 179 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 ZNF134P52741 427 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 CD177Q8N6Q3 437 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 IGKV1-9A0A0C4DH69 117 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 LYNX1G3V0Z9 82 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 LYNX1P0DP58 116 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 HGFACQ04756 655 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 ZC2HC1BQ5TFG8 222 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 CYTL1Q9NRR1 136 aa7.19□□□□□ -1.26
SHROOM4-203ENST00000460112 ZCCHC24Q8N2G6 241 aaKnown RBP7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 Q8TAT8 98 aa7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 OVOL3O00110 214 aa7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 BRD3OSQ6XYD6 125 aa7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 Q8TCH9 128 aa7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 WIPF2Q8TF74 440 aaPredicted RBP7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 C1QCP02747 245 aa7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 RHOHQ15669 191 aa7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 MRPL55Q7Z7F7 128 aaKnown RBP7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 WFDC1Q9HC57 220 aa7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 TMEM14CQ9P0S9 112 aa7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 DEFB131AP59861 70 aa7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 QRFPP83859 136 aa7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 TGFBR3LH3BV60 316 aa7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 NDUFB1O75438 58 aa7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 C5orf47Q569G3 176 aa7.18□□□□□ -1.26
SHROOM4-203ENST00000460112 SVIPQ8NHG7 77 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 TMEM14BQ9NUH8 114 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 LINC00527Q9UJ94 153 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 ANKRD11Q6UB99 2663 aaPredicted RBP7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 IGHV1-69DA0A0B4J2H0 117 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 IGHV1-69P01742 117 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 ATP5G1P05496 136 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 FOXF2Q12947 444 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 LGALS9BQ3B8N2 356 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 LGALS9CQ6DKI2 356 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 V9GYY9 64 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 PIEZO2Q9H5I5 2752 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 ETV2O00321 342 aaPredicted RBP7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 HLA-DMBP28068 263 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 HS3ST6Q96QI5 342 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 IGHV2-70DA0A0C4DH43 119 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 FOXL2NBQ6ZUU3 175 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 COL4A1P02462 1669 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 IGHV2-5P01817 119 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 AMN1Q8IY45 258 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 ANKRD29Q8N6D5 301 aa7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 USP9YO00507 2555 aaPredicted RBP7.17□□□□□ -1.26
SHROOM4-203ENST00000460112 CD59P13987 128 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 PRB3Q04118 309 aaPredicted RBP7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 NAV2Q8IVL1 2488 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 LYPD6BQ8NI32 183 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 C11orf52Q96A22 123 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 MESP1Q9BRJ9 268 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 LYPD3O95274 346 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 LMO1P25800 156 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 HAMPP81172 84 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 C2orf66Q6UXQ4 117 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 PRDM6Q9NQX0 595 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 TCF15Q12870 199 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 C20orf78Q9BR46 151 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 ORMDL1Q9P0S3 153 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 A0A0A6YYD4 124 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 C5orf63A6NC05 138 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 ARMS2P0C7Q2 107 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 MP68P56378 58 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 IL15RAQ13261 267 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 COL4A5P29400 1685 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 COX8AP10176 69 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 PAX9P55771 341 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 HERV-K104P63124 156 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 MDS2Q8NDY4 140 aa7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 TNRC6BQ9UPQ9 1833 aaKnown RBP7.16□□□□□ -1.26
SHROOM4-203ENST00000460112 DKK1O94907 266 aa7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 FOXG1P55316 489 aaPredicted RBP7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 KLF2Q9Y5W3 355 aaPredicted RBP7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 RNASE2P10153 161 aaKnown RBP7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 C8orf31Q8N9H6 132 aa7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 BPESC1Q9GZL8 116 aa7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 VSIRQ9H7M9 311 aa7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 PFN2P35080 140 aa7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 NBL1P41271 181 aa7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 FOXI2Q6ZQN5 318 aa7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 DMRTC2Q8IXT2 367 aaPredicted RBP7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 PYGO2Q9BRQ0 406 aa7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 LRP4O75096 1905 aa7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 CFHR2P36980 270 aa7.15□□□□□ -1.26
SHROOM4-203ENST00000460112 HLA-DRB4P13762 266 aa7.15□□□□□ -1.27
SHROOM4-203ENST00000460112 FAM104BQ5XKR9 115 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 75.4 ms