RNA–Protein interactions for RNA: ENST00000459954.1

UBQLN4-202, Transcript of ubiquilin 4, humanhuman

TSL 2

Gene UBQLN4, Length 502 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-202ENST00000459954 ZNF502Q8TBZ5 544 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 RNF185Q96GF1 192 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 CST9LQ9H4G1 147 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 BEX4Q9NWD9 120 aaPredicted RBP4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 HILPDAQ9Y5L2 63 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 SMAD5-AS1Q9Y6J3 95 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 LRBAP50851 2863 aa4.75□□□□□ -1.65
UBQLN4-202ENST00000459954 CREBBPQ92793 2442 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 MAST4O15021 2626 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 TRBV7-1A0A0A6YYK4 115 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 A0A1W2PRD5 423 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 A0A1W2PRF3 423 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 A0A1W2PRM7 423 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 OR2T8A6NH00 312 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 CBY3A6NI87 242 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 LINC01619G3V211 115 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 C19orf84I3L1E1 186 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 K7ERU9 68 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 BUB3O43684 328 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 BRI3O95415 125 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 NPYP01303 97 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 ZNF80P51504 273 aaPredicted RBP4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 UBE2E1P51965 193 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 CRIP2P52943 208 aaPredicted RBP4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 DLX1P56177 255 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 DSCR9P59020 149 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 HES1Q14469 280 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 TWIST1Q15672 202 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 TAL2Q16559 108 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 OCIAD2Q56VL3 154 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 AMMECR1LQ6DCA0 310 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 ADAMTSL5Q6ZMM2 481 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 C9orf47Q6ZRZ4 202 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 IL17RELQ6ZVW7 336 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 OR8A1Q8NGG7 326 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 OR5A1Q8NGJ0 315 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 AP1S3Q96PC3 154 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 SIRPDQ9H106 197 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 ZFAND3Q9H8U3 227 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 U3KQE9 123 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 TEX15Q9BXT5 2789 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 WNK2Q9Y3S1 2297 aa4.74□□□□□ -1.65
UBQLN4-202ENST00000459954 MAP1AP78559 2803 aaPredicted RBP4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 IGLV2-18A0A075B6J9 118 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 IGKV2-40A0A087WW87 121 aaPredicted RBP4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 TRAV8-6A0A0B4J262 113 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 TRBV7-9A0A0J9YWB2 115 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 CENPVL3A0A0U1RRI6 287 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 LOC389332A0A1B0GUA5 103 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 GAGE12BA1L429 117 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 GAGE10A6NGK3 116 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 LINC01549A6NIU2 74 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 NCBP2LA6PVI3 153 aaKnown RBP4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 H0Y8G0 127 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 SNAI2O43623 268 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 TNFRSF6BO95407 300 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 IGKV2D-40P01614 121 aaPredicted RBP4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 MED14OSP0DP75 135 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 NDPQ00604 133 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 LOXL1Q08397 574 aaPredicted RBP4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 FAM106AQ4KMX7 169 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 Q6ZVH6 145 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 Q71RC1 249 aaPredicted RBP4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 SMIM15Q7Z3B0 74 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 BCL6BQ8N143 479 aaPredicted RBP4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 EEF1AKMT3Q96AZ1 226 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 MRAP2Q96G30 205 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 FOXC2Q99958 501 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 VGLL1Q99990 258 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 TPPP3Q9BW30 176 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 AGRNO00468 2067 aa4.73□□□□□ -1.65
UBQLN4-202ENST00000459954 ANKRD17O75179 2603 aaKnown RBP4.72□□□□□ -1.65
UBQLN4-202ENST00000459954 TRAV12-1A0A0B4J245 112 aa4.72□□□□□ -1.65
UBQLN4-202ENST00000459954 K7EP34 96 aa4.72□□□□□ -1.65
UBQLN4-202ENST00000459954 DPM2O94777 84 aa4.72□□□□□ -1.65
UBQLN4-202ENST00000459954 ORM1P02763 201 aa4.72□□□□□ -1.65
UBQLN4-202ENST00000459954 SMIM17P0DL12 118 aa4.72□□□□□ -1.65
UBQLN4-202ENST00000459954 SLC25A16P16260 332 aa4.72□□□□□ -1.65
UBQLN4-202ENST00000459954 KLRD1Q13241 179 aa4.72□□□□□ -1.65
UBQLN4-202ENST00000459954 TMEM78Q5T7P6 136 aa4.72□□□□□ -1.65
UBQLN4-202ENST00000459954 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa4.72□□□□□ -1.65
UBQLN4-202ENST00000459954 DYNAPQ8N1N2 210 aa4.72□□□□□ -1.65
UBQLN4-202ENST00000459954 HHLA3Q9XRX5 114 aa4.72□□□□□ -1.65
UBQLN4-202ENST00000459954 CCDC168Q8NDH2 2452 aa4.71□□□□□ -1.65
UBQLN4-202ENST00000459954 TMSB15BA0A087X1C1 80 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 A0A0G2JLM5 398 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 CLPSL1A2RUU4 121 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 FAM223BA6NKX1 122 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 H3BUA1 57 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 M0R381 172 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 PPP1R17O96001 155 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 IGKCP01834 107 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 SMIM13P0DJ93 91 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 PF4V1P10720 104 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 LEPP41159 167 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 LAGE3Q14657 143 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 C15orf32Q32M92 178 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 C9orf139Q6ZV77 190 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 FAM223AQ8IWN6 122 aa4.71□□□□□ -1.66
UBQLN4-202ENST00000459954 OR2K2Q8NGT1 345 aa4.71□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms