RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 TAS2R60P59551 318 aa9.2□□□□□ -0.94
COL18A1-206ENST00000459895 NANOS2P60321 138 aaKnown RBP9.2□□□□□ -0.94
COL18A1-206ENST00000459895 FLI1Q01543 452 aaPredicted RBP9.2□□□□□ -0.94
COL18A1-206ENST00000459895 RNASE8Q8TDE3 154 aaKnown RBP9.2□□□□□ -0.94
COL18A1-206ENST00000459895 LINC00479Q96M42 142 aa9.2□□□□□ -0.94
COL18A1-206ENST00000459895 C8orf49Q96NF6 230 aa9.2□□□□□ -0.94
COL18A1-206ENST00000459895 NKX6-2Q9C056 277 aaPredicted RBP9.2□□□□□ -0.94
COL18A1-206ENST00000459895 LENEPQ9Y5L5 61 aa9.2□□□□□ -0.94
COL18A1-206ENST00000459895 C11orf94C9JXX5 98 aa9.19□□□□□ -0.94
COL18A1-206ENST00000459895 ZNF324O75467 553 aaPredicted RBP9.19□□□□□ -0.94
COL18A1-206ENST00000459895 HTN1P15515 57 aa9.19□□□□□ -0.94
COL18A1-206ENST00000459895 AKR1C3P42330 323 aa9.19□□□□□ -0.94
COL18A1-206ENST00000459895 PPT1P50897 306 aa9.19□□□□□ -0.94
COL18A1-206ENST00000459895 ZNF767PQ75MW2 155 aa9.19□□□□□ -0.94
COL18A1-206ENST00000459895 PRNTQ86SH4 94 aa9.19□□□□□ -0.94
COL18A1-206ENST00000459895 TMEM263Q8WUH6 116 aaKnown RBP9.19□□□□□ -0.94
COL18A1-206ENST00000459895 HIST1H2BAQ96A08 127 aa9.19□□□□□ -0.94
COL18A1-206ENST00000459895 TCEAL7Q9BRU2 100 aa9.19□□□□□ -0.94
COL18A1-206ENST00000459895 PSG8Q9UQ74 426 aa9.19□□□□□ -0.94
COL18A1-206ENST00000459895 TMEM189A5PLL7 270 aa9.18□□□□□ -0.94
COL18A1-206ENST00000459895 TEX46H3BTG2 121 aa9.18□□□□□ -0.94
COL18A1-206ENST00000459895 BCL2P10415 239 aa9.18□□□□□ -0.94
COL18A1-206ENST00000459895 FAM222AQ5U5X8 452 aa9.18□□□□□ -0.94
COL18A1-206ENST00000459895 Q6AWC8 147 aa9.18□□□□□ -0.94
COL18A1-206ENST00000459895 C11orf45Q8TAV5 145 aa9.18□□□□□ -0.94
COL18A1-206ENST00000459895 C2CD4CQ8TF44 421 aa9.18□□□□□ -0.94
COL18A1-206ENST00000459895 C16orf74Q96GX8 76 aa9.18□□□□□ -0.94
COL18A1-206ENST00000459895 PYGO2Q9BRQ0 406 aa9.18□□□□□ -0.94
COL18A1-206ENST00000459895 NDFIP1Q9BT67 221 aa9.18□□□□□ -0.94
COL18A1-206ENST00000459895 TREM1Q9NP99 234 aa9.18□□□□□ -0.94
COL18A1-206ENST00000459895 CXorf65A6NEN9 183 aa9.17□□□□□ -0.94
COL18A1-206ENST00000459895 ZNF80P51504 273 aaPredicted RBP9.17□□□□□ -0.94
COL18A1-206ENST00000459895 MUC21Q5SSG8 566 aa9.17□□□□□ -0.94
COL18A1-206ENST00000459895 Q6ZTC4 211 aa9.17□□□□□ -0.94
COL18A1-206ENST00000459895 FMC1Q96HJ9 113 aa9.17□□□□□ -0.94
COL18A1-206ENST00000459895 DKK2Q9UBU2 259 aa9.17□□□□□ -0.94
COL18A1-206ENST00000459895 ALMS1Q8TCU4 4167 aa9.16□□□□□ -0.94
COL18A1-206ENST00000459895 FBLL1A6NHQ2 334 aaKnown RBP9.16□□□□□ -0.94
COL18A1-206ENST00000459895 C3orf84H3BNL1 204 aa9.16□□□□□ -0.94
COL18A1-206ENST00000459895 IFNA1P01562 189 aa9.16□□□□□ -0.94
COL18A1-206ENST00000459895 UBE2G1P62253 170 aa9.16□□□□□ -0.94
COL18A1-206ENST00000459895 MEF2BQ02080 365 aaPredicted RBP9.16□□□□□ -0.94
COL18A1-206ENST00000459895 CASC10Q5T4H9 136 aa9.16□□□□□ -0.94
COL18A1-206ENST00000459895 PCNPQ8WW12 178 aaKnown RBP9.16□□□□□ -0.94
COL18A1-206ENST00000459895 C11orf52Q96A22 123 aa9.16□□□□□ -0.94
COL18A1-206ENST00000459895 LINC00467Q9BRT7 94 aa9.16□□□□□ -0.94
COL18A1-206ENST00000459895 DERL1Q9BUN8 251 aa9.16□□□□□ -0.94
COL18A1-206ENST00000459895 NAGKQ9UJ70 344 aa9.16□□□□□ -0.94
COL18A1-206ENST00000459895 TP53TG3Q9ULZ0 132 aa9.16□□□□□ -0.94
COL18A1-206ENST00000459895 PLECQ15149 4684 aaKnown RBP9.16□□□□□ -0.94
COL18A1-206ENST00000459895 IGHV1OR15-1A0A075B7D0 117 aa9.15□□□□□ -0.94
COL18A1-206ENST00000459895 CBY3A6NI87 242 aa9.15□□□□□ -0.94
COL18A1-206ENST00000459895 RGS13O14921 159 aa9.15□□□□□ -0.94
COL18A1-206ENST00000459895 GCGP01275 180 aa9.15□□□□□ -0.94
COL18A1-206ENST00000459895 LTAP01374 205 aa9.15□□□□□ -0.94
COL18A1-206ENST00000459895 BLOC1S1P78537 153 aa9.15□□□□□ -0.94
COL18A1-206ENST00000459895 C12orf74Q32Q52 190 aa9.15□□□□□ -0.94
COL18A1-206ENST00000459895 TEX261Q6UWH6 196 aa9.15□□□□□ -0.94
COL18A1-206ENST00000459895 EIF4E3Q8N5X7 224 aaKnown RBP9.15□□□□□ -0.94
COL18A1-206ENST00000459895 NHLRC2Q8NBF2 726 aa9.15□□□□□ -0.94
COL18A1-206ENST00000459895 C11orf72Q8NBR9 251 aa9.15□□□□□ -0.94
COL18A1-206ENST00000459895 ZC2HC1AQ96GY0 325 aa9.15□□□□□ -0.94
COL18A1-206ENST00000459895 LYSTQ99698 3801 aa9.15□□□□□ -0.94
COL18A1-206ENST00000459895 KMT2CQ8NEZ4 4911 aaKnown RBP9.14□□□□□ -0.95
COL18A1-206ENST00000459895 TRAV21A0A0B4J279 112 aa9.14□□□□□ -0.95
COL18A1-206ENST00000459895 TRBV6-1A0A0K0K1D8 114 aa9.14□□□□□ -0.95
COL18A1-206ENST00000459895 TEX48A0A1B0GUV7 120 aa9.14□□□□□ -0.95
COL18A1-206ENST00000459895 TMEM183BQ1AE95 376 aa9.14□□□□□ -0.95
COL18A1-206ENST00000459895 SMUG1Q53HV7 270 aa9.14□□□□□ -0.95
COL18A1-206ENST00000459895 ZNF680Q8NEM1 530 aa9.14□□□□□ -0.95
COL18A1-206ENST00000459895 LYPD6BQ8NI32 183 aa9.14□□□□□ -0.95
COL18A1-206ENST00000459895 C11orf21Q9P2W6 132 aa9.14□□□□□ -0.95
COL18A1-206ENST00000459895 KLF12Q9Y4X4 402 aa9.14□□□□□ -0.95
COL18A1-206ENST00000459895 NUPR2A6NF83 97 aa9.13□□□□□ -0.95
COL18A1-206ENST00000459895 PFN1P07737 140 aaKnown RBP9.13□□□□□ -0.95
COL18A1-206ENST00000459895 SPART-AS1P0CW21 52 aa9.13□□□□□ -0.95
COL18A1-206ENST00000459895 ANXA2RQ3ZCQ2 193 aa9.13□□□□□ -0.95
COL18A1-206ENST00000459895 SAPCD1Q5SSQ6 148 aa9.13□□□□□ -0.95
COL18A1-206ENST00000459895 ZNF493Q6ZR52 646 aa9.13□□□□□ -0.95
COL18A1-206ENST00000459895 PHLDA1Q8WV24 401 aaPredicted RBP9.13□□□□□ -0.95
COL18A1-206ENST00000459895 NOP10Q9NPE3 64 aaKnown RBP9.13□□□□□ -0.95
COL18A1-206ENST00000459895 GSN-AS1Q9NRJ2 163 aa9.13□□□□□ -0.95
COL18A1-206ENST00000459895 LYRM9A8MSI8 78 aa9.12□□□□□ -0.95
COL18A1-206ENST00000459895 SNURFLB1AK76 121 aa9.12□□□□□ -0.95
COL18A1-206ENST00000459895 TYMSP04818 313 aa9.12□□□□□ -0.95
COL18A1-206ENST00000459895 RPL35P42766 123 aaKnown RBP9.12□□□□□ -0.95
COL18A1-206ENST00000459895 TCL1AP56279 114 aa9.12□□□□□ -0.95
COL18A1-206ENST00000459895 ZNF415Q09FC8 603 aa9.12□□□□□ -0.95
COL18A1-206ENST00000459895 TOR2AQ5JU69 321 aa9.12□□□□□ -0.95
COL18A1-206ENST00000459895 IBA57Q5T440 356 aaKnown RBP9.12□□□□□ -0.95
COL18A1-206ENST00000459895 TMEM183AQ8IXX5 376 aa9.12□□□□□ -0.95
COL18A1-206ENST00000459895 TXNDC17Q9BRA2 123 aa9.12□□□□□ -0.95
COL18A1-206ENST00000459895 VAX2Q9UIW0 290 aa9.12□□□□□ -0.95
COL18A1-206ENST00000459895 TIMM8BQ9Y5J9 83 aaPredicted RBP9.12□□□□□ -0.95
COL18A1-206ENST00000459895 PDE6DO43924 150 aa9.11□□□□□ -0.95
COL18A1-206ENST00000459895 SH2D1AO60880 128 aa9.11□□□□□ -0.95
COL18A1-206ENST00000459895 DAD1P61803 113 aa9.11□□□□□ -0.95
COL18A1-206ENST00000459895 TDRG1Q3Y452 100 aa9.11□□□□□ -0.95
COL18A1-206ENST00000459895 CENPWQ5EE01 88 aa9.11□□□□□ -0.95
COL18A1-206ENST00000459895 FAM159AQ6UWV7 190 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 80 ms