RNA–Protein interactions for RNA: ENST00000459639.5

U2AF1-204, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 1 (best) BASIC

Gene U2AF1, Length 1,675 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-204ENST00000459639 GDF5OSQ5U4N7 250 aa18.22■□□□□ 0.51
U2AF1-204ENST00000459639 ZFAND2AQ8N6M9 145 aa18.22■□□□□ 0.51
U2AF1-204ENST00000459639 ODF3Q96PU9 254 aa18.22■□□□□ 0.51
U2AF1-204ENST00000459639 CRISP2P16562 243 aa18.21■□□□□ 0.51
U2AF1-204ENST00000459639 KRTAP24-1Q3LI83 254 aa18.21■□□□□ 0.51
U2AF1-204ENST00000459639 OR2K2Q8NGT1 345 aa18.21■□□□□ 0.51
U2AF1-204ENST00000459639 ZNF256Q9Y2P7 627 aaPredicted RBP18.21■□□□□ 0.51
U2AF1-204ENST00000459639 TMEM189A5PLL7 270 aa18.2■□□□□ 0.5
U2AF1-204ENST00000459639 DUSP14O95147 198 aaKnown RBP18.2■□□□□ 0.5
U2AF1-204ENST00000459639 APRG1Q8IVJ8 170 aa18.2■□□□□ 0.5
U2AF1-204ENST00000459639 JMJD1CQ15652 2540 aa18.2■□□□□ 0.5
U2AF1-204ENST00000459639 HIGD1CA8MV81 97 aa18.19■□□□□ 0.5
U2AF1-204ENST00000459639 C1orf196B1AJZ1 125 aa18.19■□□□□ 0.5
U2AF1-204ENST00000459639 IGLV1-51P01701 117 aa18.19■□□□□ 0.5
U2AF1-204ENST00000459639 DEFB131AP59861 70 aa18.19■□□□□ 0.5
U2AF1-204ENST00000459639 NUP35Q8NFH5 326 aa18.19■□□□□ 0.5
U2AF1-204ENST00000459639 XKRY2A2RUG3 117 aa18.18■□□□□ 0.5
U2AF1-204ENST00000459639 RPS20P60866 119 aaKnown RBP18.18■□□□□ 0.5
U2AF1-204ENST00000459639 GTSF1Q8WW33 167 aa18.18■□□□□ 0.5
U2AF1-204ENST00000459639 MAP6D1Q9H9H5 199 aa18.18■□□□□ 0.5
U2AF1-204ENST00000459639 CD33P20138 364 aa18.18■□□□□ 0.5
U2AF1-204ENST00000459639 PRR9Q5T870 116 aa18.18■□□□□ 0.5
U2AF1-204ENST00000459639 NIPBLQ6KC79 2804 aaeCLIP18.18■□□□□ 0.5
U2AF1-204ENST00000459639 LINC01559Q495D7 138 aa18.17■□□□□ 0.5
U2AF1-204ENST00000459639 LEPP41159 167 aa18.16■□□□□ 0.5
U2AF1-204ENST00000459639 FOXA3P55318 350 aaPredicted RBP18.16■□□□□ 0.5
U2AF1-204ENST00000459639 TEP1Q99973 2627 aaKnown RBP18.16■□□□□ 0.5
U2AF1-204ENST00000459639 GPX1P07203 203 aa18.15■□□□□ 0.5
U2AF1-204ENST00000459639 GZMBP10144 247 aa18.15■□□□□ 0.5
U2AF1-204ENST00000459639 RAB5BP61020 215 aa18.15■□□□□ 0.5
U2AF1-204ENST00000459639 Q6AWC8 147 aa18.15■□□□□ 0.5
U2AF1-204ENST00000459639 KLLNB2CW77 178 aa18.15■□□□□ 0.5
U2AF1-204ENST00000459639 HLA-DRB4P13762 266 aa18.15■□□□□ 0.5
U2AF1-204ENST00000459639 COX19Q49B96 90 aa18.15■□□□□ 0.5
U2AF1-204ENST00000459639 HLA-DRB4X5D2U9 266 aa18.15■□□□□ 0.5
U2AF1-204ENST00000459639 SPINK4O60575 86 aa18.14■□□□□ 0.49
U2AF1-204ENST00000459639 ORM1P02763 201 aa18.14■□□□□ 0.49
U2AF1-204ENST00000459639 TRGC2P03986 189 aa18.14■□□□□ 0.49
U2AF1-204ENST00000459639 RASL11AQ6T310 242 aa18.14■□□□□ 0.49
U2AF1-204ENST00000459639 ATP5L2Q7Z4Y8 100 aa18.14■□□□□ 0.49
U2AF1-204ENST00000459639 TRAV21A0A0B4J279 112 aa18.13■□□□□ 0.49
U2AF1-204ENST00000459639 A8MTW9 85 aa18.13■□□□□ 0.49
U2AF1-204ENST00000459639 PRIMA1Q86XR5 153 aa18.13■□□□□ 0.49
U2AF1-204ENST00000459639 TMSB15BA0A087X1C1 80 aa18.12■□□□□ 0.49
U2AF1-204ENST00000459639 J3KRW8 73 aa18.12■□□□□ 0.49
U2AF1-204ENST00000459639 MRPL54Q6P161 138 aaKnown RBP18.12■□□□□ 0.49
U2AF1-204ENST00000459639 PGLYRP4Q96LB8 373 aa18.12■□□□□ 0.49
U2AF1-204ENST00000459639 SORL1Q92673 2214 aa18.12■□□□□ 0.49
U2AF1-204ENST00000459639 KNCNA6PVL3 124 aa18.12■□□□□ 0.49
U2AF1-204ENST00000459639 TSPOP30536 169 aa18.12■□□□□ 0.49
U2AF1-204ENST00000459639 CMC4P56277 68 aaPredicted RBP18.12■□□□□ 0.49
U2AF1-204ENST00000459639 ODF3L2Q3SX64 289 aa18.12■□□□□ 0.49
U2AF1-204ENST00000459639 ACTL10Q5JWF8 245 aa18.12■□□□□ 0.49
U2AF1-204ENST00000459639 WDR73Q6P4I2 378 aa18.12■□□□□ 0.49
U2AF1-204ENST00000459639 C11orf21Q9P2W6 132 aa18.12■□□□□ 0.49
U2AF1-204ENST00000459639 AGRNO00468 2067 aa18.11■□□□□ 0.49
U2AF1-204ENST00000459639 RNASE4P34096 147 aaKnown RBP18.11■□□□□ 0.49
U2AF1-204ENST00000459639 AMTNQ6UX39 209 aa18.11■□□□□ 0.49
U2AF1-204ENST00000459639 GNB1LQ9BYB4 327 aa18.11■□□□□ 0.49
U2AF1-204ENST00000459639 IGKV3D-20A0A0C4DH25 116 aa18.1■□□□□ 0.49
U2AF1-204ENST00000459639 H3BMM0 161 aa18.1■□□□□ 0.49
U2AF1-204ENST00000459639 PHOX2AO14813 284 aa18.1■□□□□ 0.49
U2AF1-204ENST00000459639 IGKV3-20P01619 116 aa18.1■□□□□ 0.49
U2AF1-204ENST00000459639 ZFP82Q8N141 532 aa18.1■□□□□ 0.49
U2AF1-204ENST00000459639 ZNF747Q9BV97 191 aa18.1■□□□□ 0.49
U2AF1-204ENST00000459639 TRAPPC1Q9Y5R8 145 aa18.1■□□□□ 0.49
U2AF1-204ENST00000459639 A0A1B0GXF2 115 aa18.09■□□□□ 0.49
U2AF1-204ENST00000459639 MT-ND6P03923 174 aa18.09■□□□□ 0.49
U2AF1-204ENST00000459639 CDKN1BP46527 198 aa18.09■□□□□ 0.49
U2AF1-204ENST00000459639 INSL3P51460 131 aa18.09■□□□□ 0.49
U2AF1-204ENST00000459639 KIR3DS1Q14943 382 aa18.09■□□□□ 0.49
U2AF1-204ENST00000459639 ZNF575Q86XF7 245 aa18.09■□□□□ 0.49
U2AF1-204ENST00000459639 OR11H12B2RN74 326 aa18.09■□□□□ 0.49
U2AF1-204ENST00000459639 FRMD6-AS1P0C7T7 363 aa18.09■□□□□ 0.49
U2AF1-204ENST00000459639 BEAN1Q3B7T3 259 aa18.09■□□□□ 0.49
U2AF1-204ENST00000459639 FAM110AQ9BQ89 295 aa18.09■□□□□ 0.49
U2AF1-204ENST00000459639 C7orf71A4D174 169 aa18.08■□□□□ 0.48
U2AF1-204ENST00000459639 SNURFLB1AK76 121 aa18.08■□□□□ 0.48
U2AF1-204ENST00000459639 IGLC6P0CF74 106 aa18.08■□□□□ 0.48
U2AF1-204ENST00000459639 ZNF124Q15973 351 aa18.08■□□□□ 0.48
U2AF1-204ENST00000459639 C9orf66Q5T8R8 295 aa18.08■□□□□ 0.48
U2AF1-204ENST00000459639 Q6ZQT7 251 aa18.08■□□□□ 0.48
U2AF1-204ENST00000459639 FER1L6-AS1Q8NA97 138 aa18.08■□□□□ 0.48
U2AF1-204ENST00000459639 ATRQ13535 2644 aa18.08■□□□□ 0.48
U2AF1-204ENST00000459639 MAST4O15021 2626 aa18.07■□□□□ 0.48
U2AF1-204ENST00000459639 CTRLP40313 264 aa18.07■□□□□ 0.48
U2AF1-204ENST00000459639 HBBP68871 147 aa18.07■□□□□ 0.48
U2AF1-204ENST00000459639 TMEM136Q6ZRR5 245 aa18.07■□□□□ 0.48
U2AF1-204ENST00000459639 BORCS7Q96B45 105 aa18.07■□□□□ 0.48
U2AF1-204ENST00000459639 CLUHP3Q96NS8 147 aa18.07■□□□□ 0.48
U2AF1-204ENST00000459639 TENM1Q9UKZ4 2725 aa18.06■□□□□ 0.48
U2AF1-204ENST00000459639 A0A1B0GUT8 65 aa18.06■□□□□ 0.48
U2AF1-204ENST00000459639 HLA-DQA1P01909 254 aa18.06■□□□□ 0.48
U2AF1-204ENST00000459639 FABP9Q0Z7S8 132 aa18.06■□□□□ 0.48
U2AF1-204ENST00000459639 FRZBQ92765 325 aa18.06■□□□□ 0.48
U2AF1-204ENST00000459639 M0R2Z0 102 aa18.06■□□□□ 0.48
U2AF1-204ENST00000459639 SPINK13Q1W4C9 94 aa18.06■□□□□ 0.48
U2AF1-204ENST00000459639 GFI1BQ5VTD9 330 aa18.06■□□□□ 0.48
U2AF1-204ENST00000459639 LYZL1Q6UWQ5 148 aa18.06■□□□□ 0.48
U2AF1-204ENST00000459639 TPPP3Q9BW30 176 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 135.7 ms