RNA–Protein interactions for RNA: ENST00000459625.5

HDAC7-217, Transcript of histone deacetylase 7, humanhuman

TSL 2

Gene HDAC7, Length 6,414 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC7-217ENST00000459625 ZNF124Q15973 351 aa12.73□□□□□ -0.37
HDAC7-217ENST00000459625 MRPL53Q96EL3 112 aaKnown RBP12.73□□□□□ -0.37
HDAC7-217ENST00000459625 HIST3H2BBQ8N257 126 aa12.73□□□□□ -0.37
HDAC7-217ENST00000459625 C8orf31Q8N9H6 132 aa12.73□□□□□ -0.37
HDAC7-217ENST00000459625 DYSFO75923 2080 aa12.73□□□□□ -0.37
HDAC7-217ENST00000459625 SHISA9B4DS77 424 aa12.72□□□□□ -0.37
HDAC7-217ENST00000459625 Q6ZRM9 215 aa12.72□□□□□ -0.37
HDAC7-217ENST00000459625 DEFB135Q30KP9 77 aa12.72□□□□□ -0.37
HDAC7-217ENST00000459625 COL4A6Q14031 1691 aa12.72□□□□□ -0.37
HDAC7-217ENST00000459625 SPART-AS1P0CW21 52 aa12.72□□□□□ -0.37
HDAC7-217ENST00000459625 Q8N8P6 123 aa12.72□□□□□ -0.37
HDAC7-217ENST00000459625 HERVK_113P63121 156 aa12.72□□□□□ -0.37
HDAC7-217ENST00000459625 WFDC9Q8NEX5 89 aa12.72□□□□□ -0.37
HDAC7-217ENST00000459625 XIRP1Q702N8 1843 aaKnown RBP12.72□□□□□ -0.37
HDAC7-217ENST00000459625 A0A1B0GW64 132 aa12.71□□□□□ -0.37
HDAC7-217ENST00000459625 NYNRINQ9P2P1 1898 aaKnown RBP12.71□□□□□ -0.37
HDAC7-217ENST00000459625 GPHB5Q86YW7 130 aa12.71□□□□□ -0.37
HDAC7-217ENST00000459625 CYYR1Q96J86 154 aa12.71□□□□□ -0.37
HDAC7-217ENST00000459625 IGLV3-9A0A075B6K5 115 aa12.71□□□□□ -0.37
HDAC7-217ENST00000459625 MPZP25189 248 aa12.71□□□□□ -0.37
HDAC7-217ENST00000459625 LOXP28300 417 aaPredicted RBP12.71□□□□□ -0.37
HDAC7-217ENST00000459625 CARD19Q96LW7 228 aa12.71□□□□□ -0.37
HDAC7-217ENST00000459625 PRSS46E5RG02 174 aa12.71□□□□□ -0.38
HDAC7-217ENST00000459625 FGF16O43320 207 aa12.71□□□□□ -0.38
HDAC7-217ENST00000459625 TRBV19A0A075B6N1 114 aa12.71□□□□□ -0.38
HDAC7-217ENST00000459625 SLAQ13239 276 aa12.71□□□□□ -0.38
HDAC7-217ENST00000459625 PDE6HQ13956 83 aa12.71□□□□□ -0.38
HDAC7-217ENST00000459625 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.7□□□□□ -0.382e-7■■■■□ 21.7
HDAC7-217ENST00000459625 SRSF8Q9BRL6 282 aaKnown RBP12.7□□□□□ -0.38
HDAC7-217ENST00000459625 USF3Q68DE3 2245 aa12.7□□□□□ -0.38
HDAC7-217ENST00000459625 C17orf58Q2M2W7 97 aa12.7□□□□□ -0.38
HDAC7-217ENST00000459625 C17orf77Q96MU5 243 aa12.7□□□□□ -0.38
HDAC7-217ENST00000459625 TRAV13-2A0A0B4J235 113 aa12.7□□□□□ -0.38
HDAC7-217ENST00000459625 PROP1O75360 226 aa12.7□□□□□ -0.38
HDAC7-217ENST00000459625 FOXE3Q13461 319 aa12.7□□□□□ -0.38
HDAC7-217ENST00000459625 AMTNQ6UX39 209 aa12.7□□□□□ -0.38
HDAC7-217ENST00000459625 ELANEP08246 267 aa12.7□□□□□ -0.38
HDAC7-217ENST00000459625 K7EM74 188 aa12.69□□□□□ -0.38
HDAC7-217ENST00000459625 SPATA25Q9BR10 227 aa12.69□□□□□ -0.38
HDAC7-217ENST00000459625 Q6ZR03 302 aa12.69□□□□□ -0.38
HDAC7-217ENST00000459625 YPEL3P61236 119 aaPredicted RBP12.69□□□□□ -0.38
HDAC7-217ENST00000459625 MRPL52Q86TS9 123 aaKnown RBP12.69□□□□□ -0.38
HDAC7-217ENST00000459625 COL24A1Q17RW2 1714 aa12.69□□□□□ -0.38
HDAC7-217ENST00000459625 ZNF833PQ6ZTB9 187 aa12.69□□□□□ -0.38
HDAC7-217ENST00000459625 NDUFA4L2Q9NRX3 87 aa12.69□□□□□ -0.38
HDAC7-217ENST00000459625 IGKV2-24A0A0C4DH68 120 aa12.68□□□□□ -0.38
HDAC7-217ENST00000459625 RBM3P98179 157 aaKnown RBP12.68□□□□□ -0.38
HDAC7-217ENST00000459625 COX7B2Q8TF08 81 aa12.68□□□□□ -0.38
HDAC7-217ENST00000459625 Q9H8V8 135 aa12.68□□□□□ -0.38
HDAC7-217ENST00000459625 IGHV4-61A0A0C4DH41 118 aa12.68□□□□□ -0.38
HDAC7-217ENST00000459625 FAM104BQ5XKR9 115 aa12.68□□□□□ -0.38
HDAC7-217ENST00000459625 DOCK8Q8NF50 2099 aa12.68□□□□□ -0.38
HDAC7-217ENST00000459625 J3QRE1 110 aa12.67□□□□□ -0.38
HDAC7-217ENST00000459625 K7ERJ3 54 aa12.67□□□□□ -0.38
HDAC7-217ENST00000459625 ATP5G1P05496 136 aa12.67□□□□□ -0.38
HDAC7-217ENST00000459625 MRPL23Q16540 153 aaKnown RBP12.67□□□□□ -0.38
HDAC7-217ENST00000459625 CYTL1Q9NRR1 136 aa12.67□□□□□ -0.38
HDAC7-217ENST00000459625 FOXI2Q6ZQN5 318 aa12.67□□□□□ -0.38
HDAC7-217ENST00000459625 NDUFB1O75438 58 aa12.67□□□□□ -0.38
HDAC7-217ENST00000459625 CRYBA4P53673 196 aa12.67□□□□□ -0.38
HDAC7-217ENST00000459625 ATP6V0E2Q8NHE4 81 aa12.67□□□□□ -0.38
HDAC7-217ENST00000459625 RNF183Q96D59 192 aa12.67□□□□□ -0.38
HDAC7-217ENST00000459625 PRR25Q96S07 402 aa12.67□□□□□ -0.38
HDAC7-217ENST00000459625 GVINP1Q7Z2Y8 2422 aa12.67□□□□□ -0.38
HDAC7-217ENST00000459625 C1orf194Q5T5A4 169 aa12.66□□□□□ -0.38
HDAC7-217ENST00000459625 H3BRN7 92 aa12.66□□□□□ -0.38
HDAC7-217ENST00000459625 COL5A3P25940 1745 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-217ENST00000459625 A0A096LNI7 61 aa12.66□□□□□ -0.38
HDAC7-217ENST00000459625 H0Y9J4 135 aa12.66□□□□□ -0.38
HDAC7-217ENST00000459625 IGHV2-5P01817 119 aa12.66□□□□□ -0.38
HDAC7-217ENST00000459625 NACAE9PAV3 2078 aa12.66□□□□□ -0.38
HDAC7-217ENST00000459625 FAM231BA6NCW3 169 aa12.66□□□□□ -0.38
HDAC7-217ENST00000459625 LHFPL1Q86WI0 220 aa12.66□□□□□ -0.38
HDAC7-217ENST00000459625 ZC2HC1AQ96GY0 325 aa12.66□□□□□ -0.38
HDAC7-217ENST00000459625 SIPA1L3O60292 1781 aaPredicted RBP12.66□□□□□ -0.38
HDAC7-217ENST00000459625 WNK3Q9BYP7 1800 aa12.66□□□□□ -0.38
HDAC7-217ENST00000459625 A8MWP6 167 aa12.65□□□□□ -0.38
HDAC7-217ENST00000459625 WIPF2Q8TF74 440 aaPredicted RBP12.65□□□□□ -0.38
HDAC7-217ENST00000459625 MRPL35Q9NZE8 188 aaKnown RBP12.65□□□□□ -0.38
HDAC7-217ENST00000459625 BLCAPP62952 87 aa12.65□□□□□ -0.38
HDAC7-217ENST00000459625 HIST2H2BCQ6DN03 193 aa12.65□□□□□ -0.38
HDAC7-217ENST00000459625 GFRA4Q9GZZ7 299 aa12.65□□□□□ -0.38
HDAC7-217ENST00000459625 ZNF503-AS2A6NEH8 195 aa12.64□□□□□ -0.39
HDAC7-217ENST00000459625 FUSP35637 526 aaKnown RBP eCLIP12.64□□□□□ -0.39
HDAC7-217ENST00000459625 CITED1Q99966 193 aa12.64□□□□□ -0.39
HDAC7-217ENST00000459625 NPYP01303 97 aa12.64□□□□□ -0.39
HDAC7-217ENST00000459625 MRPL36Q9P0J6 103 aaKnown RBP12.64□□□□□ -0.39
HDAC7-217ENST00000459625 ZNF407Q9C0G0 2248 aa12.64□□□□□ -0.39
HDAC7-217ENST00000459625 VOPP1Q96AW1 172 aa12.64□□□□□ -0.39
HDAC7-217ENST00000459625 COX7A2LO14548 114 aa12.64□□□□□ -0.39
HDAC7-217ENST00000459625 IGHV4OR15-8A0A075B7B6 117 aa12.63□□□□□ -0.39
HDAC7-217ENST00000459625 A0A087WW49 117 aa12.63□□□□□ -0.39
HDAC7-217ENST00000459625 ARID2Q68CP9 1835 aa12.63□□□□□ -0.39
HDAC7-217ENST00000459625 DYNAPQ8N1N2 210 aa12.63□□□□□ -0.39
HDAC7-217ENST00000459625 SMAD5-AS1Q9Y6J3 95 aa12.63□□□□□ -0.39
HDAC7-217ENST00000459625 CNOT1A5YKK6 2376 aaKnown RBP12.63□□□□□ -0.39
HDAC7-217ENST00000459625 C17orf82Q86X59 251 aaPredicted RBP12.63□□□□□ -0.39
HDAC7-217ENST00000459625 ORMDL1Q9P0S3 153 aa12.63□□□□□ -0.39
HDAC7-217ENST00000459625 C16orf74Q96GX8 76 aa12.63□□□□□ -0.39
HDAC7-217ENST00000459625 SIGLEC8Q9NYZ4 499 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms