RNA–Protein interactions for RNA: ENST00000458709.1

PRAMEF35P-201, Transcript of PRAME family member 35, pseudogene, humanhuman

BASIC

Gene PRAMEF35P, Length 891 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF35P-201ENST00000458709 EMP1P54849 157 aa7.98□□□□□ -1.13
PRAMEF35P-201ENST00000458709 ANKRD39Q53RE8 183 aa7.98□□□□□ -1.13
PRAMEF35P-201ENST00000458709 PSMG4Q5JS54 123 aa7.98□□□□□ -1.13
PRAMEF35P-201ENST00000458709 C11orf52Q96A22 123 aa7.98□□□□□ -1.13
PRAMEF35P-201ENST00000458709 FAM19A4Q96LR4 140 aa7.98□□□□□ -1.13
PRAMEF35P-201ENST00000458709 YTHDF2Q9Y5A9 579 aaKnown RBP7.98□□□□□ -1.13
PRAMEF35P-201ENST00000458709 LENEPQ9Y5L5 61 aa7.98□□□□□ -1.13
PRAMEF35P-201ENST00000458709 TRBV6-1A0A0K0K1D8 114 aa7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 HTN3P15516 51 aa7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 CLLU1Q5K131 121 aa7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 AMTNQ6UX39 209 aa7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 COX8CQ7Z4L0 72 aa7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 SPATA12Q7Z6I5 190 aa7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 OR8A1Q8NGG7 326 aa7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 HIST1H2BAQ96A08 127 aa7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 RPUSD4Q96CM3 377 aaKnown RBP7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 FAM210BQ96KR6 192 aa7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 TMPRSS5Q9H3S3 457 aa7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 SMDT1Q9H4I9 107 aa7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 XCL2Q9UBD3 114 aa7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 KLF12Q9Y4X4 402 aa7.97□□□□□ -1.13
PRAMEF35P-201ENST00000458709 DIRC3C9JPN6 131 aa7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 M0R3E3 92 aa7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 EIF3GO75821 320 aaKnown RBP eCLIP7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 DUSP14O95147 198 aaKnown RBP7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 TCRAP04437 139 aa7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 SPART-AS1P0CW21 52 aa7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 BCL2P10415 239 aa7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 FGF8P55075 233 aaPredicted RBP7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 RANP62826 216 aaKnown RBP7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 CCL20P78556 96 aa7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 ICAM4Q14773 271 aa7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 EXOC3-AS1Q8N2X6 119 aa7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 C6orf223Q8N319 242 aa7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 RNF182Q8N6D2 247 aa7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 BLNKQ8WV28 456 aa7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 ATG101Q9BSB4 218 aa7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 MED9Q9NWA0 146 aa7.96□□□□□ -1.14
PRAMEF35P-201ENST00000458709 EPM2AB3EWF7 344 aa7.95□□□□□ -1.14
PRAMEF35P-201ENST00000458709 IGLV2-11P01706 119 aa7.95□□□□□ -1.14
PRAMEF35P-201ENST00000458709 CRISP2P16562 243 aa7.95□□□□□ -1.14
PRAMEF35P-201ENST00000458709 MEF2BQ02080 365 aaPredicted RBP7.95□□□□□ -1.14
PRAMEF35P-201ENST00000458709 GDF5OSQ5U4N7 250 aa7.95□□□□□ -1.14
PRAMEF35P-201ENST00000458709 TMEM88Q6PEY1 159 aa7.95□□□□□ -1.14
PRAMEF35P-201ENST00000458709 TMEM75Q8N9X5 138 aa7.95□□□□□ -1.14
PRAMEF35P-201ENST00000458709 LINC00477Q96M19 166 aa7.95□□□□□ -1.14
PRAMEF35P-201ENST00000458709 EPDR1Q9UM22 224 aa7.95□□□□□ -1.14
PRAMEF35P-201ENST00000458709 NBDYA0A0U1RRE5 68 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 PGPA6NDG6 321 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 PRAC2D3DTV9 90 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 TMEM250H0YL14 139 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 H3BTX0 84 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 PDE6DO43924 150 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 IFNA1P01562 189 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 INAFM2P0DMQ5 153 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 CSN1S1P47710 185 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 CNN1P51911 297 aaKnown RBP7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 KRTAP10-2P60368 255 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 ZNF506Q5JVG8 444 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 FAM222AQ5U5X8 452 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 EBLN2Q6P2I7 272 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 ZNF705AQ6ZN79 300 aaPredicted RBP7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 CYB561D1Q8N8Q1 229 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 ZNF738Q8NE65 137 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 LINC00052Q96N35 136 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 FAM210AQ96ND0 272 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 C1QTNF4Q9BXJ3 329 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 DKK2Q9UBU2 259 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 VAX2Q9UIW0 290 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 MYCBP2O75592 4640 aa7.94□□□□□ -1.14
PRAMEF35P-201ENST00000458709 LOC102723971A0A1B0GUV8 181 aa7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 ZNF705FA8MVS1 300 aaPredicted RBP7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 KLLNB2CW77 178 aa7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 PAGE4O60829 102 aa7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 ZNF705DP0CH99 300 aaPredicted RBP7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 ZNF705BP0CI00 300 aaPredicted RBP7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 NUTF2P61970 127 aaKnown RBP7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 SUMO1P63165 101 aaKnown RBP7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 IGFL4Q6B9Z1 124 aa7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 OR10J6PQ8NGY7 276 aa7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 CMTM2Q8TAZ6 248 aa7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 SMIM12Q96EX1 92 aa7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 NEU1Q99519 415 aa7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 NIPSNAP3BQ9BS92 247 aa7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 ZNF492Q9P255 531 aa7.93□□□□□ -1.14
PRAMEF35P-201ENST00000458709 FAT1Q14517 4588 aa7.92□□□□□ -1.14
PRAMEF35P-201ENST00000458709 IGHV3OR16-12A0A075B7B8 117 aa7.92□□□□□ -1.14
PRAMEF35P-201ENST00000458709 TMEM189A5PLL7 270 aa7.92□□□□□ -1.14
PRAMEF35P-201ENST00000458709 F6UZH7 168 aa7.92□□□□□ -1.14
PRAMEF35P-201ENST00000458709 FAM229AH3BQW9 127 aa7.92□□□□□ -1.14
PRAMEF35P-201ENST00000458709 S100A9P06702 114 aaKnown RBP7.92□□□□□ -1.14
PRAMEF35P-201ENST00000458709 SNRPCP09234 159 aaKnown RBP7.92□□□□□ -1.14
PRAMEF35P-201ENST00000458709 FAM3BP58499 235 aaPredicted RBP7.92□□□□□ -1.14
PRAMEF35P-201ENST00000458709 ZNRF2Q8NHG8 242 aa7.92□□□□□ -1.14
PRAMEF35P-201ENST00000458709 C20orf144Q9BQM9 153 aa7.92□□□□□ -1.14
PRAMEF35P-201ENST00000458709 AGPAT4-IT1Q9H0P7 198 aa7.92□□□□□ -1.14
PRAMEF35P-201ENST00000458709 GNG13Q9P2W3 67 aa7.92□□□□□ -1.14
PRAMEF35P-201ENST00000458709 UBR4Q5T4S7 5183 aa7.92□□□□□ -1.14
PRAMEF35P-201ENST00000458709 RBFOX3A6NFN3 312 aa7.91□□□□□ -1.14
PRAMEF35P-201ENST00000458709 F6UB75 175 aa7.91□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 52.3 ms