RNA–Protein interactions for RNA: ENST00000457035.5

ATG4A-206, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 3

Gene ATG4A, Length 939 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-206ENST00000457035 RPH3ALQ9UNE2 315 aa7.22□□□□□ -1.25
ATG4A-206ENST00000457035 TRAV12-3A0A0B4J271 114 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 A0A1B0GV50 99 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 SERTM2A0A1B0GWG4 89 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 PAGE4O60829 102 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 HBE1P02100 147 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 GPX1P07203 203 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 RNASE4P34096 147 aaKnown RBP7.21□□□□□ -1.26
ATG4A-206ENST00000457035 TAS2R60P59551 318 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 RRN3P1Q2M238 152 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 PRR9Q5T870 116 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 ZFAND6Q6FIF0 208 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 Q6ZQT7 251 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 SGK494Q96LW2 274 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 LINC00479Q96M42 142 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 KRTAP4-8Q9BYQ9 185 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 ARL2-SNX15V9GYD0 113 aa7.21□□□□□ -1.26
ATG4A-206ENST00000457035 NACAE9PAV3 2078 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 C7orf71A4D174 169 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 H7BYZ3 331 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 IFNA7P01567 189 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 BTN1A1Q13410 526 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 PMS2P11Q13670 270 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 CST9LP1Q5W188 147 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 ALKAL2Q6UX46 152 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 CYB561D1Q8N8Q1 229 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 C11orf45Q8TAV5 145 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 HIST1H2BAQ96A08 127 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 LYSTQ99698 3801 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 ATG101Q9BSB4 218 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 PSG8Q9UQ74 426 aa7.2□□□□□ -1.26
ATG4A-206ENST00000457035 MUC4Q99102 2169 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 TRAV34A0A0B4J273 112 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 LOC102723971A0A1B0GUV8 181 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 PLAC8L1A1L4L8 177 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 TMEM189A5PLL7 270 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 K7EQM0 130 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 PEX7O00628 323 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 ATP5G3P48201 142 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 PPT1P50897 306 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 NANOS2P60321 138 aaKnown RBP7.19□□□□□ -1.26
ATG4A-206ENST00000457035 TMEM75Q8N9X5 138 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 PYGO2Q9BRQ0 406 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 LINC00467Q9BRT7 94 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 NIPSNAP3BQ9BS92 247 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 TREM1Q9NP99 234 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 CELA1Q9UNI1 258 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 KLF12Q9Y4X4 402 aa7.19□□□□□ -1.26
ATG4A-206ENST00000457035 FBLL1A6NHQ2 334 aaKnown RBP7.18□□□□□ -1.26
ATG4A-206ENST00000457035 HTN1P15515 57 aa7.18□□□□□ -1.26
ATG4A-206ENST00000457035 EMP1P54849 157 aa7.18□□□□□ -1.26
ATG4A-206ENST00000457035 FLI1Q01543 452 aaPredicted RBP7.18□□□□□ -1.26
ATG4A-206ENST00000457035 C12orf74Q32Q52 190 aa7.18□□□□□ -1.26
ATG4A-206ENST00000457035 Q6AWC8 147 aa7.18□□□□□ -1.26
ATG4A-206ENST00000457035 ZNF493Q6ZR52 646 aa7.18□□□□□ -1.26
ATG4A-206ENST00000457035 LYPD6BQ8NI32 183 aa7.18□□□□□ -1.26
ATG4A-206ENST00000457035 RNASE8Q8TDE3 154 aaKnown RBP7.18□□□□□ -1.26
ATG4A-206ENST00000457035 TCEAL7Q9BRU2 100 aa7.18□□□□□ -1.26
ATG4A-206ENST00000457035 DKK2Q9UBU2 259 aa7.18□□□□□ -1.26
ATG4A-206ENST00000457035 LCE6AA0A183 80 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 CXorf65A6NEN9 183 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 C11orf94C9JXX5 98 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 F6UZH7 168 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 TEX46H3BTG2 121 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 SPART-AS1P0CW21 52 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 BLOC1S1P78537 153 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 ANXA2RQ3ZCQ2 193 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 FAM222AQ5U5X8 452 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 PRNTQ86SH4 94 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 C2CD4CQ8TF44 421 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 TMEM263Q8WUH6 116 aaKnown RBP7.17□□□□□ -1.26
ATG4A-206ENST00000457035 C8orf49Q96NF6 230 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 MANBALQ9NQG1 85 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 GNG13Q9P2W3 67 aa7.17□□□□□ -1.26
ATG4A-206ENST00000457035 SACSQ9NZJ4 4579 aa7.16□□□□□ -1.26
ATG4A-206ENST00000457035 IGHV1OR15-1A0A075B7D0 117 aa7.16□□□□□ -1.26
ATG4A-206ENST00000457035 TRBV6-1A0A0K0K1D8 114 aa7.16□□□□□ -1.26
ATG4A-206ENST00000457035 ZNF80P51504 273 aaPredicted RBP7.16□□□□□ -1.26
ATG4A-206ENST00000457035 TMEM183BQ1AE95 376 aa7.16□□□□□ -1.26
ATG4A-206ENST00000457035 SAPCD1Q5SSQ6 148 aa7.16□□□□□ -1.26
ATG4A-206ENST00000457035 EIF4E3Q8N5X7 224 aaKnown RBP7.16□□□□□ -1.26
ATG4A-206ENST00000457035 C11orf72Q8NBR9 251 aa7.16□□□□□ -1.26
ATG4A-206ENST00000457035 PHLDA1Q8WV24 401 aaPredicted RBP7.16□□□□□ -1.26
ATG4A-206ENST00000457035 C16orf74Q96GX8 76 aa7.16□□□□□ -1.26
ATG4A-206ENST00000457035 TXNDC17Q9BRA2 123 aa7.16□□□□□ -1.26
ATG4A-206ENST00000457035 TP53TG3Q9ULZ0 132 aa7.16□□□□□ -1.26
ATG4A-206ENST00000457035 TRAV21A0A0B4J279 112 aa7.15□□□□□ -1.26
ATG4A-206ENST00000457035 LYRM9A8MSI8 78 aa7.15□□□□□ -1.26
ATG4A-206ENST00000457035 RGS13O14921 159 aa7.15□□□□□ -1.26
ATG4A-206ENST00000457035 SMUG1Q53HV7 270 aa7.15□□□□□ -1.26
ATG4A-206ENST00000457035 CEMP1Q6PRD7 247 aaPredicted RBP7.15□□□□□ -1.26
ATG4A-206ENST00000457035 TEX261Q6UWH6 196 aa7.15□□□□□ -1.26
ATG4A-206ENST00000457035 Q6ZTC4 211 aa7.15□□□□□ -1.26
ATG4A-206ENST00000457035 ZNF767PQ75MW2 155 aa7.15□□□□□ -1.26
ATG4A-206ENST00000457035 COX8CQ7Z4L0 72 aa7.15□□□□□ -1.26
ATG4A-206ENST00000457035 FMC1Q96HJ9 113 aa7.15□□□□□ -1.26
ATG4A-206ENST00000457035 NDFIP1Q9BT67 221 aa7.15□□□□□ -1.26
ATG4A-206ENST00000457035 ZFP30Q9Y2G7 519 aa7.15□□□□□ -1.26
ATG4A-206ENST00000457035 TIMM8BQ9Y5J9 83 aaPredicted RBP7.15□□□□□ -1.26
ATG4A-206ENST00000457035 RYR2Q92736 4967 aa7.15□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 92.8 ms