RNA–Protein interactions for RNA: ENST00000456953.5

SNHG17-208, Transcript of small nucleolar RNA host gene 17, human

TSL 3 BASIC

Gene SNHG17, Length 546 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SNHG17-208	ENST00000456953	PSMB3	P49720	205 aa		9.16	□□□□□ -0.94
SNHG17-208	ENST00000456953	XG	P55808	180 aa		9.16	□□□□□ -0.94
SNHG17-208	ENST00000456953	BLOC1S1	P78537	153 aa		9.16	□□□□□ -0.94
SNHG17-208	ENST00000456953	MBD3L1	Q8WWY6	194 aa		9.16	□□□□□ -0.94
SNHG17-208	ENST00000456953	C17orf77	Q96MU5	243 aa		9.16	□□□□□ -0.94
SNHG17-208	ENST00000456953	SLC50A1	Q9BRV3	221 aa		9.16	□□□□□ -0.94
SNHG17-208	ENST00000456953	TMEM208	Q9BTX3	173 aa		9.16	□□□□□ -0.94
SNHG17-208	ENST00000456953	PGPEP1	Q9NXJ5	209 aa		9.16	□□□□□ -0.94
SNHG17-208	ENST00000456953	RAN	P62826	216 aa	Known RBP	9.15	□□□□□ -0.94
SNHG17-208	ENST00000456953	PDE6H	Q13956	83 aa		9.15	□□□□□ -0.94
SNHG17-208	ENST00000456953	EBLN2	Q6P2I7	272 aa		9.15	□□□□□ -0.94
SNHG17-208	ENST00000456953	SAT2	Q96F10	170 aa	Predicted RBP	9.15	□□□□□ -0.94
SNHG17-208	ENST00000456953	AAMDC	Q9H7C9	122 aa		9.15	□□□□□ -0.94
SNHG17-208	ENST00000456953	TRAV1-1	A0A0B4J248	108 aa		9.14	□□□□□ -0.95
SNHG17-208	ENST00000456953	SLC17A3	O00476	420 aa		9.14	□□□□□ -0.95
SNHG17-208	ENST00000456953	SOCS3	O14543	225 aa		9.14	□□□□□ -0.95
SNHG17-208	ENST00000456953	ZNF253	O75346	499 aa		9.14	□□□□□ -0.95
SNHG17-208	ENST00000456953	ATP5G1	P05496	136 aa		9.14	□□□□□ -0.95
SNHG17-208	ENST00000456953	ATP5G3	P48201	142 aa		9.14	□□□□□ -0.95
SNHG17-208	ENST00000456953	RAB14	P61106	215 aa		9.14	□□□□□ -0.95
SNHG17-208	ENST00000456953	IGFL4	Q6B9Z1	124 aa		9.14	□□□□□ -0.95
SNHG17-208	ENST00000456953	IGF2BP2-AS1	Q96M15	143 aa		9.14	□□□□□ -0.95
SNHG17-208	ENST00000456953	TMPRSS5	Q9H3S3	457 aa		9.14	□□□□□ -0.95
SNHG17-208	ENST00000456953	ZNF331	Q9NQX6	463 aa	Predicted RBP	9.14	□□□□□ -0.95
SNHG17-208	ENST00000456953	TRAV8-2	A0A0B4J237	113 aa		9.13	□□□□□ -0.95
SNHG17-208	ENST00000456953		A0A0J9YX75	114 aa		9.13	□□□□□ -0.95
SNHG17-208	ENST00000456953	NDUFB4	O95168	129 aa		9.13	□□□□□ -0.95
SNHG17-208	ENST00000456953	TSPO	P30536	169 aa		9.13	□□□□□ -0.95
SNHG17-208	ENST00000456953	PPT1	P50897	306 aa		9.13	□□□□□ -0.95
SNHG17-208	ENST00000456953	UBE2G2	P60604	165 aa		9.13	□□□□□ -0.95
SNHG17-208	ENST00000456953	CDPF1	Q6NVV7	123 aa		9.13	□□□□□ -0.95
SNHG17-208	ENST00000456953	RNF182	Q8N6D2	247 aa		9.13	□□□□□ -0.95
SNHG17-208	ENST00000456953	ZNF738	Q8NE65	137 aa		9.13	□□□□□ -0.95
SNHG17-208	ENST00000456953	HMCN2	Q8NDA2	5059 aa		9.13	□□□□□ -0.95
SNHG17-208	ENST00000456953	CBY3	A6NI87	242 aa		9.12	□□□□□ -0.95
SNHG17-208	ENST00000456953	ZNF705G	A8MUZ8	300 aa	Predicted RBP	9.12	□□□□□ -0.95
SNHG17-208	ENST00000456953		F6UB75	175 aa		9.12	□□□□□ -0.95
SNHG17-208	ENST00000456953		J3QL48	77 aa		9.12	□□□□□ -0.95
SNHG17-208	ENST00000456953	CSN1S1	P47710	185 aa		9.12	□□□□□ -0.95
SNHG17-208	ENST00000456953	ICAM4	Q14773	271 aa		9.12	□□□□□ -0.95
SNHG17-208	ENST00000456953	PSG3	Q16557	428 aa		9.12	□□□□□ -0.95
SNHG17-208	ENST00000456953	EXOC3-AS1	Q8N2X6	119 aa		9.12	□□□□□ -0.95
SNHG17-208	ENST00000456953	CMTM2	Q8TAZ6	248 aa		9.12	□□□□□ -0.95
SNHG17-208	ENST00000456953	UPK3B	Q9BT76	320 aa		9.12	□□□□□ -0.95
SNHG17-208	ENST00000456953	OTOR	Q9NRC9	128 aa		9.12	□□□□□ -0.95
SNHG17-208	ENST00000456953	GNG13	Q9P2W3	67 aa		9.12	□□□□□ -0.95
SNHG17-208	ENST00000456953	PRELID1	Q9Y255	219 aa		9.12	□□□□□ -0.95
SNHG17-208	ENST00000456953		A8MTW9	85 aa		9.11	□□□□□ -0.95
SNHG17-208	ENST00000456953	IFNA1	P01562	189 aa		9.11	□□□□□ -0.95
SNHG17-208	ENST00000456953	CCL20	P78556	96 aa		9.11	□□□□□ -0.95
SNHG17-208	ENST00000456953	CST9LP1	Q5W188	147 aa		9.11	□□□□□ -0.95
SNHG17-208	ENST00000456953	AMTN	Q6UX39	209 aa		9.11	□□□□□ -0.95
SNHG17-208	ENST00000456953	SUN5	Q8TC36	379 aa		9.11	□□□□□ -0.95
SNHG17-208	ENST00000456953	PCNP	Q8WW12	178 aa	Known RBP	9.11	□□□□□ -0.95
SNHG17-208	ENST00000456953	C20orf173	Q96LM9	149 aa		9.11	□□□□□ -0.95
SNHG17-208	ENST00000456953		A0A1W2PRE2	83 aa		9.1	□□□□□ -0.95
SNHG17-208	ENST00000456953	PLAC8L1	A1L4L8	177 aa		9.1	□□□□□ -0.95
SNHG17-208	ENST00000456953	PGP	A6NDG6	321 aa		9.1	□□□□□ -0.95
SNHG17-208	ENST00000456953	EREG	O14944	169 aa		9.1	□□□□□ -0.95
SNHG17-208	ENST00000456953	PAGE4	O60829	102 aa		9.1	□□□□□ -0.95
SNHG17-208	ENST00000456953	INS	P01308	110 aa		9.1	□□□□□ -0.95
SNHG17-208	ENST00000456953	PRM2	P04554	102 aa		9.1	□□□□□ -0.95
SNHG17-208	ENST00000456953	IFITM2	Q01629	132 aa		9.1	□□□□□ -0.95
SNHG17-208	ENST00000456953	RXFP4	Q8TDU9	374 aa		9.1	□□□□□ -0.95
SNHG17-208	ENST00000456953	RPUSD4	Q96CM3	377 aa	Known RBP	9.1	□□□□□ -0.95
SNHG17-208	ENST00000456953	MRPL53	Q96EL3	112 aa	Known RBP	9.1	□□□□□ -0.95
SNHG17-208	ENST00000456953	MANBAL	Q9NQG1	85 aa		9.1	□□□□□ -0.95
SNHG17-208	ENST00000456953	FAM74A7	A6NL05	159 aa		9.09	□□□□□ -0.95
SNHG17-208	ENST00000456953	FAM229A	H3BQW9	127 aa		9.09	□□□□□ -0.95
SNHG17-208	ENST00000456953		M0R3E3	92 aa		9.09	□□□□□ -0.95
SNHG17-208	ENST00000456953	SLC25A5	P05141	298 aa	Known RBP	9.09	□□□□□ -0.95
SNHG17-208	ENST00000456953	LINC00315	P59091	139 aa		9.09	□□□□□ -0.95
SNHG17-208	ENST00000456953	SUMO1	P63165	101 aa	Known RBP	9.09	□□□□□ -0.95
SNHG17-208	ENST00000456953		Q6ZRN7	208 aa	Predicted RBP	9.09	□□□□□ -0.95
SNHG17-208	ENST00000456953	OR10J6P	Q8NGY7	276 aa		9.09	□□□□□ -0.95
SNHG17-208	ENST00000456953	NKX6-2	Q9C056	277 aa	Predicted RBP	9.09	□□□□□ -0.95
SNHG17-208	ENST00000456953	MDFIC	Q9P1T7	246 aa		9.09	□□□□□ -0.95
SNHG17-208	ENST00000456953	RPH3AL	Q9UNE2	315 aa		9.09	□□□□□ -0.95
SNHG17-208	ENST00000456953	GGTLC3	B5MD39	225 aa		9.08	□□□□□ -0.96
SNHG17-208	ENST00000456953	NMB	P08949	121 aa		9.08	□□□□□ -0.96
SNHG17-208	ENST00000456953	PRB4	P10163	310 aa	Predicted RBP	9.08	□□□□□ -0.96
SNHG17-208	ENST00000456953	TAGLN2	P37802	199 aa	Known RBP	9.08	□□□□□ -0.96
SNHG17-208	ENST00000456953	ERVFC1-1	P60608	527 aa		9.08	□□□□□ -0.96
SNHG17-208	ENST00000456953	C5orf17	Q8NAS9	161 aa		9.08	□□□□□ -0.96
SNHG17-208	ENST00000456953	MRPS16	Q9Y3D3	137 aa	Known RBP	9.08	□□□□□ -0.96
SNHG17-208	ENST00000456953	ARL2-SNX15	V9GYD0	113 aa		9.08	□□□□□ -0.96
SNHG17-208	ENST00000456953	TRAV26-1	A0A087WT03	109 aa		9.07	□□□□□ -0.96
SNHG17-208	ENST00000456953		M0R2Z0	102 aa		9.07	□□□□□ -0.96
SNHG17-208	ENST00000456953	CRX	O43186	299 aa	Predicted RBP	9.07	□□□□□ -0.96
SNHG17-208	ENST00000456953	SMR3B	P02814	79 aa	Predicted RBP	9.07	□□□□□ -0.96
SNHG17-208	ENST00000456953	BCL2	P10415	239 aa		9.07	□□□□□ -0.96
SNHG17-208	ENST00000456953	AZU1	P20160	251 aa		9.07	□□□□□ -0.96
SNHG17-208	ENST00000456953	FUS	P35637	526 aa	Known RBP eCLIP	9.07	□□□□□ -0.96
SNHG17-208	ENST00000456953	HIST1H1A	Q02539	215 aa	Predicted RBP	9.07	□□□□□ -0.96
SNHG17-208	ENST00000456953	ESRG	Q1W209	222 aa		9.07	□□□□□ -0.96
SNHG17-208	ENST00000456953	SPINK13	Q1W4C9	94 aa		9.07	□□□□□ -0.96
SNHG17-208	ENST00000456953		Q6ZSN1	163 aa		9.07	□□□□□ -0.96
SNHG17-208	ENST00000456953	OR8A1	Q8NGG7	326 aa		9.07	□□□□□ -0.96
SNHG17-208	ENST00000456953	LYPD6B	Q8NI32	183 aa		9.07	□□□□□ -0.96
SNHG17-208	ENST00000456953	IGKV2-40	A0A087WW87	121 aa	Predicted RBP	9.06	□□□□□ -0.96

Retrieved 100 of 20,778 RNA–protein pairs in 106.3 ms